Daphnia magna (water flea): 116920989
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Entry
116920989 CDS
T07514
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116920989
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116920989
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116920989
NCBI-ProteinID:
XP_032783070
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All DBs
Position
LG4:complement(5141349..5144398)
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AA seq
676 aa
AA seq
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MRLNATGSNHTVSKYVLQRELGNKFPLGFQDKFRKRIYISFSNDPKHGFWDQSTSGKSGN
SGQHGGVFNLEYSPDGSILIAACEQKSFIVLDPITRRDVHNVYNSHSDCVNCVKFLDCRT
FATCSDDTTVALWDIRNLKQKMRTLRGHSNWVKNIEFVREEGLLVTSGFDGCVFTWDINS
YTEQGFMSQRVFHTNGLMRMRLTPDNTKMILCTAGGYIMIIHNLDFATLNQDLAGFKPNM
YRLMQISQTPISLATNFSHLFRSKRNRIELISDWPAGNEAEVISSLHVHPQGWCVVSRNT
SNLDKSEWTCVHDIQDMSLDSPAISRKRPRVENEESQPSTSYPVTSSSSGSSSDQSDEET
HHPRAATTNISPGPQVEVRITAPLQWGTRTGEAAGFHLRLDSDRVSVENESIDNLEVRIP
SEEVLEALETIRRAQSGEDENHTSEFRIRHRMFRRNSTPLPARLGQLNNNASSSDGIPSS
SLLVTDQRDRSSREDVAWEDSENPNITAHFVRAVADLAARSVHLLDPFRLRSRHDIRRHP
PSLTYDAESRGDFEMDIHSNLNRITYFVEEPNVGRGYIKELCFSPDGRVIASPYSNGVRL
LTFNPQCADMSYSLSPSAIRGTRSNGNEKEPPHTLHSLTTNKGHSDVVVTTKFSPTHPLF
VSGCLGGKIVWHQPVL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagactaaatgcgacaggctcaaatcatactgtgagtaaatatgtgcttcagcgagag
ctcggaaacaaatttccattgggctttcaagacaaattccggaaaaggatatacatatca
ttctccaatgatccaaagcatggattttgggatcagtcaacaagcggaaaatcaggaaac
agtggccagcatggtggagtcttcaatcttgagtattcacctgatggatccatcctcatt
gcagcctgtgaacaaaagagtttcatagtgttggatccaataacaagaagagatgtccat
aatgtatataattcacattcagactgtgtgaactgtgtcaagtttcttgattgccggact
tttgctacttgttctgatgacacaacagttgcattatgggatatcagaaatttgaagcaa
aaaatgagaaccttaagaggtcattccaactgggtgaaaaatattgaatttgtcagagaa
gaaggtttgttggtaacttctggttttgatggctgtgtttttacttgggatatcaacagt
tacacagagcaaggatttatgagccaacgggtttttcacacaaacggcctgatgagaatg
agattgactcctgataacaccaaaatgatcttgtgtactgctggcggatacatcatgatt
attcacaatttagattttgcaactttgaatcaagaccttgctgggtttaaaccgaacatg
taccggctgatgcaaatcagccagacgcctatatccttggccacgaattttagtcaccta
ttcaggtcaaaacgaaatcgtatagagttgatttctgattggcctgcaggaaacgaagcc
gaagtcatttcttcattacatgtacacccacaaggatggtgtgtcgtcagtcgaaatacc
agcaacttggataaatctgagtggacttgcgtccatgacattcaagatatgtctctggac
tcgcctgccatttcccgaaagcgacctagggttgaaaacgaagaaagtcagccatccact
tcgtatcccgttacgtcgtcttctagcggctcttcttcagatcagagtgatgaagaaact
catcatccgagagcagcgacaacgaatatatctccaggaccacaggtagaagttcgaata
acggctccgttacaatggggtactcggactggagaagcggctggcttccatcttcgtctt
gactctgatagagtctctgtcgagaacgagtcgatagataacctagaggtccgaattcca
agtgaggaagtgctagaggcattggaaactattcgtcgtgcgcagtcgggggaagatgaa
aaccatacctctgaatttcgaattcgtcatcgtatgtttcgcaggaattctactccgcta
cccgcacgccttggacagttgaataacaatgcatccagcagcgatggaataccatctagt
tcattgcttgtaacagaccagcgtgataggtcctcgagagaggatgtggcttgggaggat
tcagaaaatccaaatataacagcacattttgttcgggctgtggctgatttggctgctcgt
tctgtccatctccttgacccattccgtttacggtctcgccatgatatccggcggcatccg
ccatccttgacttatgatgccgaaagtagaggggattttgagatggacatccattccaac
ctcaatcgaatcacatattttgttgaagagccaaatgtaggaagaggatacataaaagaa
ttgtgtttttcacctgacggccgcgttattgcgagcccatatagcaacggtgttcgcctc
cttaccttcaatccccaatgtgcagacatgtcttacagcttgtccccttctgccattagg
ggtacgcgttcaaatggaaatgaaaaagaaccaccgcatacattgcactcattgacaact
aacaagggtcactccgatgttgttgtaacgacaaagtttagccctacccatccacttttt
gtctcaggttgtcttggcgggaaaattgtttggcaccaacctgttctttag
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