Daphnia magna (water flea): 116921045
Help
Entry
116921045 CDS
T07514
Name
(RefSeq) NFX1-type zinc finger-containing protein 1 isoform X1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
dmk
Daphnia magna (water flea)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
AAA_22
PhoH
AAA_16
LBR_tudor
ICAT
Motif
Other DBs
NCBI-GeneID:
116921045
NCBI-ProteinID:
XP_032783121
LinkDB
All DBs
Position
LG4:complement(10496024..10512078)
Genome browser
AA seq
2323 aa
AA seq
DB search
MENPSRGGGRGTTGAYRGGSTRGKQAGSGRLLLGAIPKNHESSTTGRWRGSSSTAVHQHG
NRGRGFHVPNSMPHQRQGSHRRLDFEYIMRLASDNAQPSEVIRCLGDPENDLALQLQENL
SNVEYLELIIVALGGFCKKNGASQFTESFVTVVKILAAQKIFTYVIPIIINIPVSRARNL
PPKEERLKRLTTAIFHLATEMLVLTPALGCHALGENFFTDIISLKVMPSIKNFNVTDAFD
VLDGGIQQLQTAWSQHIPVVVSKDERRIRREKYLEELILQDPPNDFRTLNVMPNWEDVCL
DVEPFLRPSIVKGKYPDIATYLDIQFRLLREDFFNPLRVGLLAYKSQTDKKHSRIRNPDN
IRLYYEVRILEYNMHEDCYTIQFSNAGLRRIVWEHSKRFLYGSLVCLSSDNFMSFHLFTV
LDRNPKLLEEGKIKVKFEGGTLSAALKKQTFVMAESTVFFESYRSILTALQRISPTNFPL
EDYILGRNSSPEVPDYLNGKNPLYDLTCVPMHLPSDDEVGDIQVVEMRDAHENDEVDYLP
EVKIRDSDDEVGDIQVVEMRDAHENDEVDYLPEVKIRDSDDDDHSNKQAGKLRMQQVPIL
ESRLRPNASDLGLDPSQCAALYAALTQTISVIQGPPGTGKTYLGLRIVETLLKNKRYWNT
ERFARPSPILVICYTNHALDQFLEGISEFTHKIVRIGSQSKCAALEPFSLMAWKKKPRQY
AERDTKKWIFEINDKLREFDKERDIIHSVMMVMRSRGLIHEDSFLRMKIIPKSLYSAFNA
LKHSIRYGNQNWTALGFWLGIYRNEDLQQLVNCFSKNSFTKHHATKNLPVASPTEENGTA
DDQWDKEIIEEIQTNRKVEDDDHLAAVKAQKLSRHSNPEDEALNKVFVNFSYKFSEDETL
IKEFKECLETVEGEDALWYQLNIRELQNKMLLLRQLLLTVPTLEEKQLDGWYKNDIMHIP
LNIRWMMYNSWKAKALDIQEERATKLEELYLKNANRLKDVRTLESAEICQNADIVGLTTT
GAAKQRALLNHLKPKIVIVEEAAEVLEAHVVCALSASCQQLVLIGDHQQLRPPVTVHRLA
KDFSLDVSLFERLIKNGMEPCVLGVQHRMRPEIARLIVPAIYPTLENHSSVLKYPAIRGL
ASNIFFLTHSEPEIGDHEGKSHLNPYEAQLSLTLARHLIMQGYTPKQITILTTYSGQLLH
FFKIRREQPAVQSVRISVVDNFQGEENDIIILSLVRSNEDENIGFLRIENRICVALSRAK
QGFYMIGNMQNLQGKSKLWSGISKMLESNGQIGPDFCLKCDIHDVVTKARKVADFPPEGG
CMEKCVTTMGCGHICPKICHANNDREHTEFKCKENCTRFCPVGHPCPKKCFVDCKPCMVQ
VTKKLPCTHEQIVYCYKDLAKEFCQTPVWKILPSCGHGVDLLCGASVSEAVCPEPCGITL
DCGHICPLSCHKRSSHANVKCQQPCQRLCSDQHPCNKMCFEDCGKCFTKMMKTLPCGHES
EVECSQPLRDVNCNVRVIKPLTDCEHTIEIECGKSTDGYKCNKPCEKTLCIDGHPCKKRC
FQPCGRCSVRMERQLKCGHSAVVECYVDPLTIRCRVIKEGCLLPLCGHRVALHCGKDPYQ
AVCNLPCNVRLECGHSCTLRCHTGKDPDHQEYQCKKQCGKMKKGCKKNHKCGKKCFEDCV
LCNEKWTRTLPCGHSLHTECHRNDEDIFCSKMMTKVIPECGHEMELACSTEPTRLLCKEL
CNLMLPCGHKCKKKCCEPCSQADCNEPVTTSRFNICGHHVTLDCKSFHAVDGIPTESQVQ
SHLKTCLKPCNAMLDCMHQCKGTCGECFNGRVHRACDDKCGRSLVCGHICDVNCGLSCPP
CRGTCEYSCPHSRCRHKCCEPCSACQEPCEWKCQHQTCGKKCGEPCDRTRCNEPCNKKLP
CGHSCIGLCGEICPPLCRVCDKDKLTDFKLLYNEENDDARFIFLPECEHCIEVEGMDHWM
ATNVGGQIQPKCCPRCKTTVRICMRYGDIIKSTFDDIAKAKKKILQLKGNPLEFFKRANT
QVRKCISLIKKCQPLNSLIVAIVNQNLKDIYQLLKPKTTNGKKVNPSMGSDIRFQTEVNL
SFLERVLEMMAKMILEVENPYGSNRPLMSTLAPTSTKSTYMAPELTDELNALVQKLLYSL
LKRSRISIAEYRTVDRELERLEYVQAYFVLKSSALFPTIGATSSENQLIQQLLMNNVRVL
EDSQKVEIKSALKKLGENMKTGLGISDKERQEIVTAMGMSRGHWFKCPNGHIYAIGDCGG
ATMESRCNECNAVIGGGNHQVRNDNGLAREMDGAIAPAWPMRV
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatccctcgagaggaggagggcgtggtacaacaggagcatatcgaggaggctct
acaagaggtaaacaagcgggcagtggccgcttattgctgggtgcaatccccaaaaatcac
gaatcttctacaactggaagatggagagggtcatcttctacagcagtccaccaacatgga
aatcgaggccgaggatttcatgtaccaaactcgatgccacatcaaaggcaaggcagtcat
cgaagattggattttgaatacatcatgaggttggcaagtgacaatgctcaaccgtcggaa
gtgatacgttgtctcggtgatcccgaaaatgatttagcactccaacttcaggaaaatttg
agcaatgtcgagtacctggaactcatcatagtcgcccttggagggttttgcaagaaaaat
ggagcttcacaatttacagaaagttttgttactgtcgtgaagatattagcggcccaaaaa
atatttacatacgtaattccaatcatcataaacattcccgtgtctcgagccagaaatttg
ccgccgaaagaggaacgtttgaaacgcctgaccaccgccatctttcacctggcgaccgaa
atgttggtcttgacacccgccttgggttgccatgcattgggcgagaatttttttacggat
ataatttcattgaaagtcatgccttcgatcaaaaattttaacgtcacagatgcctttgat
gttctggatggcgggattcaacagttacagacggcatggagtcaacacatccccgttgtg
gtgagcaaagacgaacgtcgcattcgcagggaaaagtatctggaagaattgattctacaa
gacccgcccaatgatttccggacgctgaatgttatgcctaattgggaggatgtctgcctg
gatgttgagcctttcctccgtccgagtattgtcaagggcaaatatccggacattgcgacc
tatctagatatccaattccgtctactacgcgaggatttctttaatccattacgcgttgga
ttgttggcgtacaaaagtcagacggataagaaacattcacggatacggaatccggacaac
attcggctttactatgaagtcagaattctggaatataatatgcatgaagattgttatacg
attcaattctctaacgccggattaaggagaatcgtctgggagcacagcaaacgatttctt
tacggatcgctcgtttgtctctcttcagacaattttatgtcattccacttgttcacggtt
ttggatcgcaatccgaaacttttggaagaaggcaaaataaaagtcaagtttgaaggcggt
actttatcggcagctctaaaaaagcagacgtttgtcatggcggaatcaacagtgtttttc
gaatcataccgaagcatccttacagctttacaacggatcagccctactaattttcctttg
gaagactatatactcggtcgaaactcttcaccagaagttcctgattacctaaatgggaaa
aatcctctctatgatttgacatgcgtgccaatgcatttgccaagcgatgatgaagtaggc
gatatacaagtggtcgagatgagagacgctcatgaaaatgatgaagtggactatttaccg
gaggtcaagattagagattccgatgatgaagtaggcgatatacaagtggtcgagatgaga
gacgctcatgaaaatgatgaagtagactatttaccggaggtcaagattagagattccgat
gatgatgatcactctaataagcaggcaggcaagctccgcatgcaacaagttcccattctc
gaatcaagattgcgtccaaatgcaagtgacctgggactggatcctagtcagtgtgctgca
ctgtacgcagcgttgacgcaaacaatttctgtgattcagggtccaccaggaactgggaaa
acgtatttgggtctgagaatcgttgaaacgttactaaaaaacaaacggtactggaacacc
gaacgatttgcacgaccatcgcctattttggttatttgctacaccaaccatgctctagac
cagtttttagagggcatatcggaattcacccacaagattgtgcgcattggtagccaaagc
aaatgcgcggctctagagcctttttcgttaatggcctggaagaaaaagccaaggcaatat
gcagaacgtgataccaagaaatggatcttcgaaataaatgataaactacgcgaatttgac
aaggaacgagatatcatccacagtgttatgatggtaatgcgttcacgtggactgattcac
gaagactcattcctgagaatgaaaatcatcccaaaatctctgtatagcgcatttaatgct
ttaaagcattcaataagatatggcaaccaaaattggacagctttgggattttggcttggg
atatataggaacgaagaccttcaacagcttgtcaactgtttcagtaaaaatagtttcaca
aagcatcatgcgacaaagaatttgcctgtagcttcaccaacggaggaaaacggcacagca
gacgatcaatgggataaggaaatcattgaagaaatccaaactaatcgtaaagtagaagac
gacgaccacttggcagctgtaaaagctcagaaattaagtaggcattctaatccagaagat
gaagcccttaacaaagtgttcgtcaacttcagctacaagttcagtgaagacgaaactttg
attaaggagttcaaagaatgtttggaaactgtggaaggagaagatgcactttggtatcaa
ttaaatattcgagaattgcagaacaaaatgttgcttctgcgccagttgctgctaacggtc
cctactctcgaagagaagcaacttgatgggtggtacaagaacgatataatgcacatccct
ttgaacattcgttggatgatgtacaattcctggaaagccaaagctctggacattcaagaa
gagcgagctaccaaacttgaagagctctatttgaagaatgcaaaccgcttgaaagacgtt
cgaactctggaatcggctgaaatctgccaaaatgctgatattgtaggattgactacaaca
ggagcggctaaacagagggcactcttaaaccatctaaagccaaaaatagttattgtcgaa
gaagcagcggaagttttggaagcccatgtagtttgcgcattgtcagcgtcatgtcagcaa
ttagttctcattggagaccatcagcaactgagaccaccggtcacggtccatcgtctagcc
aaagatttctctctagacgtctcgctgtttgaaaggctgattaaaaatgggatggagcct
tgcgttttgggcgttcagcatcgtatgcgtcccgaaatagctcgtttgatcgtccctgcc
atttatccgacgttagaaaatcattcttcagttctgaagtatcccgccatacgaggcttg
gcatcaaatatttttttcctgacacattcggaaccagaaataggagatcacgaagggaaa
agtcatttgaatccgtatgaagcacagctttccctgactctggctcgacatcttattatg
cagggatatacgcccaagcagattacaatcctcactacgtattccgggcaacttcttcat
tttttcaagatacgccgggaacagccagctgttcagtctgttcggatttccgtagtggat
aacttccaaggtgaagagaatgatatcatcatcttgtcgcttgtgaggagcaacgaggat
gaaaacattggattccttcgcatcgagaatcgaatctgtgttgcactgtcaagggccaaa
cagggcttctatatgattggcaatatgcagaatttgcaaggaaagagcaaattgtggagc
ggtattagcaaaatgcttgaatcaaatggccaaataggaccggacttctgtttgaaatgc
gacattcacgatgttgtaacaaaagcgcgtaaagtggcagattttccaccggaaggtgga
tgcatggaaaaatgtgttacaactatgggttgtgggcacatctgtcccaagatatgtcat
gctaataatgatcgggaacacaccgaattcaagtgcaaagaaaactgcacacgtttttgc
cctgtcggacatccatgcccaaagaaatgttttgtagattgtaaaccttgtatggtgcaa
gtgactaaaaaacttccctgcacccacgaacaaatcgtatattgttataaagatctagcc
aaggaattttgtcagacgcctgtttggaagattctaccatcttgtggccatggagttgat
ttattgtgtggagcgtccgtttccgaagctgtatgtcccgaaccttgcggaattaccctc
gattgtggtcatatttgtcctctttcttgccacaaaaggagctcccatgcaaacgtgaag
tgtcaacagccttgtcaacgtctgtgttctgatcagcacccatgtaacaagatgtgcttc
gaagattgcggaaaatgtttcaccaaaatgatgaaaacgttgccatgcggccacgagagt
gaagtggaatgcagccagcctttaagagacgtcaattgcaacgtaagagtcataaaacct
cttacagattgtgaacacacaattgaaattgaatgcggcaagtcgactgatggctataaa
tgtaacaagccgtgtgaaaaaacattgtgtatcgatggccacccatgcaaaaagcgctgc
tttcaaccgtgcggacgctgttccgtcagaatggaaaggcagcttaaatgcggtcattcg
gcggttgtggagtgctatgtggatcctttgacgattagatgtcgggtcataaaagaagga
tgtctgttacctctgtgtgggcatcgagtcgcccttcattgcggcaaagacccgtaccaa
gcggtttgtaatttgccttgcaacgtccggcttgaatgtggtcatagttgcaccttgaga
tgccacactggtaaggacccagaccaccaggaataccaatgtaagaaacagtgcgggaag
atgaaaaaaggctgtaaaaagaaccataaatgcggcaagaagtgctttgaagactgtgtt
ctttgcaacgagaaatggacacgaactttgccgtgtggacattcccttcataccgaatgt
catcgcaacgacgaagacatcttttgctcgaaaatgatgacaaaggttatcccggaatgc
gggcatgaaatggaattagcatgttccactgaaccaactcggcttctttgcaaagaatta
tgtaatttaatgttgccttgcggtcataaatgcaagaaaaaatgttgcgaaccgtgcagt
caagccgattgcaacgaaccagtaacaacctcacgatttaatatatgcggtcaccacgtc
actctggattgcaaaagctttcatgcagtcgacggaatcccgaccgaatcccaagtgcag
tcgcacttgaaaacctgtttgaaaccgtgtaatgccatgcttgattgtatgcatcagtgt
aagggtacctgtggcgaatgtttcaacggaagagttcaccgcgcgtgtgatgacaaatgt
ggccgttctctcgtctgcggacacatttgtgacgtcaattgcggcctttcttgcccacca
tgtagaggaacctgtgaatattcgtgcccgcatagcagatgtcgccacaaatgttgcgaa
ccttgtagcgcatgccaggagccatgcgaatggaagtgtcagcatcaaacatgtgggaaa
aaatgtggggagccttgtgatcgcactagatgtaatgaaccctgcaataagaagttgccg
tgcggtcattcctgcataggattgtgtggcgaaatatgtccaccgctatgtcgtgtttgc
gataaagataaactgacagatttcaagttactttacaacgaagaaaatgatgatgcaaga
ttcattttcttgccggagtgtgaacactgtatcgaagtggaaggaatggatcactggatg
gctacaaacgtaggtggtcaaattcagcccaagtgttgccctcgttgtaagaccactgtt
cggatctgtatgcgctatggcgacatcattaagagcaccttcgatgatatagcaaaagcg
aaaaagaaaattttgcagttgaaaggcaaccccctggagttcttcaaaagagctaacaca
caagtgcggaaatgcataagtctaatcaaaaagtgccaaccgcttaacagtctcatcgtc
gcgatcgttaatcaaaatttgaaggatatttatcaactgttgaagccaaagacgacgaat
ggaaagaaagtcaatccgtccatggggtctgacatacgttttcaaactgaagtcaatttg
agttttttggagagagtgctggaaatgatggcaaaaatgattttggaggttgaaaaccca
tacggctccaatagaccgttaatgtctacccttgcacccacgtcaaccaagtctacatac
atggcgccggaattaactgatgaattgaatgctcttgttcagaaactgctatattctctg
ttgaagagatcccggatttccatagcagaatatcgcactgtcgatcgtgaattggagcga
ttagaatatgttcaggcttattttgttttaaaaagctctgcactctttccgaccattggg
gcaacatcatctgaaaaccaactcatacaacaacttctgatgaacaacgttcgagtgcta
gaagacagccaaaaagttgagataaaatctgcattgaaaaagttgggagagaacatgaaa
actggtcttggaattagcgacaaggagcgtcaagaaattgttacggcgatgggaatgtca
cgaggacattggtttaaatgtcccaacggccatatttatgccatcggagattgtggagga
gctacgatggaaagcagatgcaacgaatgtaacgctgttataggagggggcaatcaccaa
gtgcgcaacgataatggattggctcgggaaatggatggtgccatcgcccccgcttggccg
atgcgggtatga
DBGET
integrated database retrieval system
