Daphnia magna (water flea): 116921099
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Entry
116921099 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein cleavage-activating protein
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116921099
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116921099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
Patched
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
Beta-prop_EML
Beta-prop_TEP1_C
PQQ_2
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
PALB2_WD40
Beta-prop_IFT140_1st
DUF4307
OST3_OST6
iRhom1-2_N
Motif
Other DBs
NCBI-GeneID:
116921099
NCBI-ProteinID:
XP_032783204
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Position
LG5:5514191..5518677
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AA seq
1312 aa
AA seq
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MAFIDPQIGHHPAVEDVDPTALANGRGLHSSTKGLSIPDRVALLYYKHGLLCSSYPWCTI
VVAIIIVLTSCHPLLSLPFPGNEPEEISIPLPEKRISTDQDFETLQYPTRWGTQQPSFFI
QQIVIRSSVNPWTSDLGLMDAFRGPLGEVFKIHSGLLGFHSRTSNLTLRDVCLYVESVAP
RARSFQHLLPEFSCLVLSPANLWQLDENTFRNDAQFLDTIFSFKNPVVEVRSSMADILYG
VSLKNSGLKKFPVKTRSRVLTYAVTIILKTHSEPFLSDLRLKLRNQFPLHSSTQESSPSR
RTVVHIYYPERFNYLELIPLTFVYLVLFLYIYFSVRKIEMVKSKFGMAFSAVVTVVASLG
MSVGLCTWFGLRFTLQGRDVFPYLVVIVGLENILVLTRSVVSTPANLDVKIRVAQGLSRE
GWNITKNLLTEITILTVGFFTFVPAIQEFCLFAVVALLSDFVLQMLFFSTVLSIDILRKE
LSEIQRQRRQLQPGQQYLATNHSVQTPNSAERAFIANSVHPHLRTRGHTAAISSKATPTA
VVAPSSYTHNRSAMARVPRRIKIVHFWARTRFFQRTFMVAVVIWMSIFFYKYVAIENLTG
ETAGWSVQPNDSSPVELPAQSPQPSVKVSCSAGSNCVRSGEPDVTKETATHRAASEYATV
SPSTGKEEIDWQSRLQHPKNVDLWRRLSYRHWPDLLDIYNISLAGKCIAILPSIRLSIPV
HPERLSEVRNSRDGEYLSRSRWKSLASALDSLDVLDGDDSDFGTSGLNHDGGLNSGSGGN
GGSDEDSKTPYVPSSPIQIILTTLLAIPSVVFIAYVTVVLYRCICSRHYAEWRSSSTFWS
LGWGWAGNAGGGLTQESREYYSQIVAESMPLVLDGHRSPIECISTDGDVVSSVCLSGQLH
IWDIQTGDAVAQIDRNTYFAALHQQSTPPSPNGLRRDTYSSTNEMAAFNGPTFSNPIVLR
SSGSFHSPPASPNDLSWKDRTSPTSVKTSYYPSPVWCMQCFDGQVALGCANGRIEIWSHS
SGLRCLYDDGGGVGVAKLKVCGEYLLAARLNGTLESFQFHADFGSSVEQVDRRVHSLHGV
GEYDSEGRHSPSVFRLVRLNWARAHQQPISVLDASANGSRVVTGSLDHCLKVWRLETLTA
LYCLHGHRGPITAMFIDGAYPCSASGTGSQDGMLCMWDLSSGTCVYSLQAHDGSVSVLTY
TSSYVISLGADDKLCVWERFQGHLLNSLSLARLALCGSLAMLNDRLLVTSRQGSLVVWDV
RTGESIREVRLGDADSSTFVRNVMVVRDNVICDYGTQLRIVSFPMISTHKVE
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggcctttattgatccacaaattggtcatcaccccgccgtcgaggatgtcgatccgact
gcacttgctaatgggagaggattgcattctagcactaaaggcctcagcatacctgatagg
gtagcgttactctactacaagcatggtctcctttgctccagctacccctggtgtacaata
gtagtagcgattattattgttctcacgtcatgtcacccgttgttgtcattgccttttcct
ggaaatgaaccagaggagatatctatcccactccctgagaaaagaatctctacggatcaa
gattttgaaactcttcagtacccaacaagatggggaactcaacagccatcatttttcatt
cagcagattgtaatacgatcatcagtcaacccgtggacctctgacttgggcctgatggat
gcttttagaggtccattgggggaagttttcaagatacattcaggtctgctgggcttccac
tcacgtactagtaacttgactcttcgagacgtttgcctctacgttgagagcgtagctcct
agagctcgttcttttcaacatcttctcccggaattcagttgtctggtcctgtcacctgca
aatttgtggcaactagacgagaataccttccgcaatgacgcccagttcctagacaccatc
ttttccttcaagaaccccgtggtagaagtgcgttcaagcatggccgacatactttatggt
gtctcgctcaaaaacagtggattgaagaaattcccagtcaagactcgatcccgcgtccta
acgtatgccgtcaccatcatacttaaaactcactctgaaccgttcctctccgacttgcga
ctcaagctccgcaatcaattcccactgcattctagtactcaagaatccagtccatctcga
cgcacagtcgttcatatctactacccagaaaggttcaactacttggagcttatcccgctg
acctttgtctacttagttctgttcctctacatttacttttcggttcgcaagatagaaatg
gtgaaatcaaagttcggcatggcttttagtgccgtcgtcactgtggtggcatcactgggc
atgtctgtcggtctctgcacgtggttcggattgcgtttcacgctccaaggacgagacgta
ttcccctatttggtcgtgatcgttggcttggagaacattttggtgttgacccgctccgtg
gtgtcgacgcctgccaacttggacgttaagatccgtgtggctcagggacttagtcgcgaa
ggctggaatataaccaaaaatcttttgaccgaaatcactatcttgacggttggcttcttc
acctttgttccagcaatccaagaattctgtctgtttgccgtcgtcgccctcctatccgat
ttcgtcctccaaatgctgttcttctccaccgtcctgtccatcgacatattgcgcaaagag
ttgtcggaaatccaacgccaacggcggcagcttcaacctggccagcagtacttggccacc
aatcatagcgtccaaactccgaattcagcggaacgtgcgtttatagctaattctgtccac
ccgcacttacgcacccgagggcacacggctgccatttcgtccaaagccactccaacggcc
gtcgtagcgccttcgtcgtacacgcacaatcgatcagctatggccagagtgccacgaagg
ataaagattgttcatttctgggcccgcacgcgcttcttccagcgtacctttatggtggct
gttgtcatctggatgagtatcttcttctacaagtacgtggccatcgagaatttgacgggt
gaaacggctggctggtcagttcaaccgaacgattcatcgccggttgaacttccagcgcaa
tcgccgcaacccagtgtcaaagtctcgtgctctgccggatccaattgtgttcgatcaggg
gaaccagatgtcacgaaagaaaccgcaacccatcgcgctgcgtctgaatatgcgactgtg
tcgccctccaccggcaaagaagaaatcgattggcagagtcggttgcaacacccgaagaac
gtagatctttggaggaggttgtcgtatcgtcactggcctgatttgctggatatttacaac
atttctctggccggaaaatgcatagccatattaccttccattcgtctttccataccggtc
catcccgaacggctgtcggaagtgcgcaacagtagggacggcgagtacctgtcgcgatcg
cgctggaaatctttggcatcagccctcgattcgctcgatgtcctcgacggagatgacagt
gatttcggcacgtcgggtctcaatcacgacggaggtctcaatagtggatcaggcgggaac
gggggctcggacgaagacagcaagacaccctacgttccgtcgtcgcccatacaaatcatc
ttgaccactttattggccatccccagcgtcgttttcatcgcctacgtcaccgtcgtcctg
tatcgttgcatatgttcccgtcactacgccgaatggaggagctcttcgacgttctggtcg
ctgggttggggctgggccggcaatgccggtggcggtttgacgcaagagtctcgcgaatat
tactcacaaatagtagcagagtcgatgcctctcgttctcgacggtcaccgttcgccgatc
gaatgcatttccaccgatggcgatgtcgtatcgagcgtatgcttatccggccagctgcac
atctgggacattcaaacgggcgacgcggtagctcaaatcgatcgaaacacgtattttgcc
gccctacatcaacagtcaacgccgccgtcgccgaacggtctgcgccgtgatacgtactca
tcaaccaacgagatggccgcttttaacggtcccaccttttcgaacccgattgttttgaga
tcttcgggctcttttcattctcctccggctagccccaacgacctgtcgtggaaggacagg
actagtccgactagcgtcaaaacgtcttactatccgtcaccagtgtggtgcatgcaatgc
tttgatggacaggtggcgctgggctgcgccaacggacggattgaaatttggagccacagt
tcgggattgcgttgcctttacgatgatggcggtggcgtcggagtagctaagctgaaagtt
tgcggcgaatatcttctggctgcccggctgaatggaaccctagaatcgttccagttccat
gcggatttcggcagttctgtcgaacaagtcgatcgtcgtgttcattccctccacggggtt
ggtgaatacgattcagaaggtcgacattctccgtccgtttttcgtcttgtccggctcaac
tgggccagggctcatcaacagcccatctcagtcctggacgcgtcggccaacggcagccgc
gtagtgacgggttcattagatcattgcctgaaagtttggcggctggaaacactgacggcc
ctgtactgtttgcacggccaccgcggacccatcaccgccatgtttatcgacggcgcgtac
ccttgcagcgcgtccggaacgggaagtcaagacggaatgctgtgcatgtgggatttgtcc
agcggcacttgcgtctacagtttgcaggctcacgacggtagcgtgtccgtcctgacctac
acgtcctcgtacgtgatcagcctgggcgccgatgataagttatgcgtgtgggagcgattt
cagggtcatctgctcaactctctttcgttggcccgtcttgctctgtgcggtagtttggct
atgctcaacgaccggttacttgtcaccagtcggcaaggttcgctggtcgtctgggacgtc
cgaacgggcgaatcgattcgagaagttcgcctcggcgatgccgactcgagtactttcgtt
cgcaatgtgatggtcgttagagacaatgtcatctgtgactatggcactcagttgcgtatc
gtttctttccccatgatttccacccacaaagttgagtaa
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