Daphnia magna (water flea): 116921208
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Entry
116921208 CDS
T07514
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116921208
03036 Chromosome and associated proteins [BR:
dmk03036
]
116921208
Spliceosome [BR:
dmk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116921208
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
116921208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
NRDE-2
Lsm_interact
DUF7413
Motif
Other DBs
NCBI-GeneID:
116921208
NCBI-ProteinID:
XP_032783356
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Position
LG4:complement(1739466..1743112)
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AA seq
863 aa
AA seq
DB search
MEIQQDLKDGYENEKIGFEENDSHVDGSESSDTDDSEKEREEHYALERRVVELRKELSKS
PNAYNTHVELISCLKKLGELDQLQHARESMHAIYPLTEELWLDWLRDEIKLSLSDEDKKK
VESLFLRATGDYLSIDIWVEYIQFSLAGMDIGGAEALEKIRTVMEEAIRHGGLHVVKGGL
LWDSYRDFEMAIYQSTKAKTETENINQAKKITHLFNRQLSVPLLDMERTWKEYNDWLEIL
DQKVETHVKASYDKAKIQLEKISPLEDTLLIAVENDDKAAVYRTYLDLEMNEIKDPSRIQ
ALFERVVAEIPLYDAFWMDYCKYVDRQFKTAETTFAVFRRAVRNCPWNGPIWASYIFAAE
RYEKEDSFISGLVQNAFVAGLASAADLLAVWLGFIEYLVRKCKSDDSEQIVQLREAFTRA
TEHLHQSFDIEGDPECILLQYWAYFEAKKLNNMPKARELWRQIMGQGHGKSAQWWLARIQ
FERAHANDVTEVRKLFVKSINAVTSLDWPELIVKQWLQFEREEGDLQTMDNAQLRCDARM
EKVKKERESKIVKDLDTGKGRKRGKTEENHDSVSIPPKKAKIGHNSASTIKSDTGNTTET
RTNASQPVKPITIPQPIADPCRHANTVFLSNLDFNISEEDIRSTMSSSGTITDIRLVRDY
KQRSKGFCYVEFSSSDEVKEALKRDREPLKGRPMFISPSEPDSALKHPAFKYQSTLEKKK
LFVKGLASTTTKEDLENLFSKFGILKDVRLATFRTGISKGIAYVEFEDEVSATMAMNKTD
GTTFQDRVLTVALSNPPPRYDKKTTDREELSLGGGARERKTQLSFVPISILRQAKSSTMP
PPPPPLGAQKSNADFRSMLLNKK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggagattcagcaggatcttaaagatggctacgagaacgagaaaataggttttgaagag
aatgacagccatgtagatggatcagaaagttctgatactgatgattcggaaaaagaaagg
gaagaacattatgcgctagaaagaagagttgtcgagttgcggaaggagctttcaaaatct
ccaaatgcatacaacactcatgtggaactcattagttgtttgaaaaaacttggagaactt
gatcaactacagcatgccagagaatctatgcatgcaatttatcccttaactgaagaacta
tggctagactggctaagagatgaaatcaaactctcattatcggatgaagataaaaaaaaa
gttgaatcactctttctaagggcaacaggggattacttgagcattgatatctgggtggaa
tacatccagtttagtttggctggcatggatattggaggtgctgaagcattggaaaaaatt
agaacagtcatggaagaggcaattcgtcatggaggtttgcacgtcgtaaagggaggttta
ctgtgggactcgtatcgtgattttgaaatggccatatatcagtcaaccaaagcaaaaact
gaaacagaaaacataaatcaagctaaaaaaatcactcatctcttcaaccgtcaactctca
gtgcctttgcttgacatggaacgaacttggaaggagtataatgattggctcgagattttg
gatcagaaagtcgaaacgcacgtgaaagcttcatacgataaagcaaaaatacaactggaa
aaaatatcacctctggaggacacccttcttattgctgttgaaaatgatgacaaagctgct
gtttaccgtacttatttggatcttgagatgaatgaaattaaagatccctcacgcattcaa
gcacttttcgagcgtgttgtcgccgagatacctctgtatgatgcattctggatggattat
tgcaagtatgtcgatcgtcaatttaaaactgcggagacaacttttgcagtttttcgaaga
gcagttcgcaattgtccatggaatgggcccatatgggctagttatatttttgctgccgaa
cgctatgaaaaggaagacagtttcatttcgggattggtacaaaatgcgtttgttgctgga
ctggcttcggcggcagatttattggccgtgtggttgggattcattgaatatcttgtgcgt
aaatgcaaatctgatgacagtgaacaaatcgtccaactgcgagaagcttttacacgagcg
actgaacatttgcaccagagttttgatatcgaaggtgatcctgagtgcatattgctgcaa
tattgggcgtactttgaggcgaaaaagcttaacaacatgcctaaagctcgtgagctgtgg
aggcagataatgggtcaaggacatggtaaatcagctcaatggtggttggctcgtattcag
ttcgaaagagcccatgccaatgatgtcactgaagtccgaaaactcttcgtgaagagtata
aatgcagtaacgtcgttggattggccagagctaatcgtgaagcaatggttgcaatttgaa
cgagaagaaggtgatctacaaaccatggacaacgcacaactcagatgtgatgctcgaatg
gaaaaagtaaagaaagaaagagaaagtaaaatcgttaaggatttggatacaggtaaaggc
cggaaacgaggcaaaaccgaagagaatcacgactccgtatccatacctcctaaaaaagcc
aaaatcgggcacaatagcgcttcgactatcaagtcggacacgggaaacacaaccgaaact
cgcacaaatgcctcgcaaccggtgaagcccataaccattcctcaaccgatcgccgatccg
tgtcgtcatgctaacacagtcttcttgagcaatctggacttcaatatctccgaggaagat
atacgttcgaccatgagttcttcgggcacgataactgacatacgcctggttcgtgattat
aagcaacgtagcaagggattttgttatgttgagttctcttcatcagacgaggtaaaagaa
gcgctgaagcgggatcgtgagccgttgaagggaagacctatgtttatttcaccttcggaa
cctgactcagcattgaaacaccctgcttttaaataccagtcaactttggaaaagaaaaaa
ctatttgtaaaagggttggcttccaccacgacgaaagaggacttagaaaatcttttctca
aaatttggaattcttaaagacgttcgattagccaccttccggacagggatttcaaaaggc
atagcgtacgttgaatttgaagacgaagtttcggctacaatggctatgaataagacggat
ggaactacgttccaggatagagtcttaaccgttgcgctgagtaatccacccccgcgttac
gacaagaaaaccacagacagagaagaactatctttgggtggaggtgcaagagaaagaaaa
acacaattgtcgtttgttcccatctccattctccgacaggcgaagtcttcgacgatgcca
ccaccgccaccacccctcggtgctcaaaagagtaatgctgattttcgatccatgcttctc
aataaaaaatga
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