Daphnia magna (water flea): 116921348
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Entry
116921348 CDS
T07514
Name
(RefSeq) probable lysosomal cobalamin transporter
KO
K14617
LMBR1 domain-containing protein 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04977
Vitamin digestion and absorption
dmk04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
116921348
04980 Cobalamin transport and metabolism
116921348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116921348
Membrane trafficking [BR:
dmk04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
116921348
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Motif
Other DBs
NCBI-GeneID:
116921348
NCBI-ProteinID:
XP_032783502
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Position
LG4:9952470..9954931
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AA seq
569 aa
AA seq
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MSHDGQASFVPQNIGILLTLVFFIYVLLSAMFFTFLVRYITGKLSAERVPTVVSIVALTV
ASLPTGLIPIDVFVVGYMKNSSGQFQPWASDMRDRHDFSTTLLSAYYASYIATLFITFVI
IPLAFFFHKMETASSGRSRQNVLPALCYTGLSLVILIVLLAIGGVVPTRDLPTPNSTLED
QFRNMVEDLKTSELEDMFSFALSIIRIVGITLITAYVGVGMVLGPITHIRGYPDPRTELA
CVRNRRIGIEREISDIQQTRVRMSPGVHQLPRSEAIRLLSLEHEDLDLREREEQLKETIK
HWLSPFVMVCRPTQICAGIVGLLVGLLIFVSLFMTNILRAMYSFGESVGYLMPTVQVLNP
LDRFALFIQRVFPLDFIVLIFLVTFMILAATSGFQKMGIGIPWIKTYNISPWKTKSRSLL
VFTANLVLILLAVDVLLLALLPQYTTYSSQHYVACAENKSLAYPPLPTPLPDSAIQGEAL
VLSRGTRDGECSETVVIPCDWTAPEDQCVMTRIAVLWARVCYKTWYFGAIFYCITWIFLI
VIILEGCVATFRPQHTSSSVTILPDLESS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgatgggcaagcatcgttcgtgcctcaaaacataggaatcctgcttactttg
gttttcttcatctacgtcctgctttctgccatgtttttcaccttccttgtccgctacatt
actggaaaactatcagccgaacgtgttccaacggtcgtttctatcgtggctctcacggtg
gcatcgctgccaacaggattgattccgatcgacgttttcgtcgtgggttacatgaaaaat
tcttctggccaatttcagccgtgggcgagtgacatgcgagatcgtcatgacttttccacc
acccttctgtctgcttactatgcgtcctacatcgcaacgcttttcataacgttcgttatc
atacctttggcatttttctttcacaagatggagacggcttcctctggaaggtctcgtcag
aatgtcttgccggccttatgttacaccggcttgtctctcgtcatactcatcgtcttgcta
gccattggtggagttgtgcctacacgagatctacctactcccaattctacccttgaagat
cagttccgcaatatggtagaggatttgaaaacttcagagttggaagatatgttctccttc
gcgttgtctatcataagaattgtaggaataactttgataacggcttacgtgggtgtcgga
atggtgttgggaccaatcacccatattcgaggctatcccgatccgcgaactgaattggcc
tgtgttcgtaatcgccgcattggtatcgagagggaaatatctgacatccagcaaacacga
gtgagaatgtcaccaggagtgcatcagctgccaagatcagaagcaatccgactgctttct
ctcgaacatgaggatcttgatttacgggaaagagaagaacaactgaaggaaacaatcaag
cactggctttcgccttttgtcatggtctgtcgtccgactcagatctgcgccggcattgtc
ggattgcttgtgggtctcctcatattcgtctccctctttatgaccaatattttgcgagcc
atgtactccttcggtgaatctgtcggctatttgatgcctactgttcaagtactcaatcca
ctcgatcgatttgcactcttcatccaacgagtcttcccactcgatttcatcgtcctcata
ttccttgttactttcatgatccttgcagcaacgtcgggcttccaaaaaatgggtattgga
atcccttggatcaagacgtacaacattagcccttggaaaaccaaaagccgttcccttctg
gttttcacggcgaatttggtactcattctgctcgctgttgatgttctgctgttagctttg
ctaccgcagtacacgacttattcctcacagcattatgtcgcttgcgcggagaacaaatcg
cttgcctacccaccgcttccgacgccccttcccgattcagcaattcaaggtgaagccctc
gtgttgagcagaggaacaagagatggcgaatgtagtgaaaccgtggtgattccttgcgac
tggacggctccggaagaccaatgtgttatgacgcggattgccgtactctgggcgcgagtg
tgttacaagacctggtattttggagccattttctactgcatcacctggattttcctaatt
gtaatcatcttggaaggatgcgttgccactttccgtccacaacacacatcaagctccgtc
acgatccttcctgatttagaatcttcttaa
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