Daphnia magna (water flea): 116921364
Help
Entry
116921364 CDS
T07514
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116921364
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116921364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-met
Zap1_zf1
zf-C2HE
zf-C2H2_jaz
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
116921364
NCBI-ProteinID:
XP_032783527
LinkDB
All DBs
Position
LG4:1268698..1287970
Genome browser
AA seq
1177 aa
AA seq
DB search
MSNQGTKMEEGAWDLAELAEEDFEQLAVYIVPDAVVEPSSSNASERVNRAETSLPRNLTL
KPSQALSDVLGVWSSDYIPRGTRFGPLVGDIYAKDHVPKHANRKYFWRVYNNSEVFYYID
GYDTAKANWMRYVNPAYSSESQNLIACQYKMNIYFYTTKPILPNQELLVWYCKEFAERLN
YPVTGDLMLQRIRQQVHQNDEDGTDTEQSTAEIKKPNCDEGPMSPADGAEDVKVKQQHKK
LAADTTALSKETDQPGSKEAALAVDTTTARRDHADNHHHNHQMTPTAEGSVRSDEGYHSN
GYHDEVLTPPEDSSDSDNDNYVLDFSRKPSSSSGSSLAAGPAAGQPSSTSRLSPLAEEPV
TQQGSPQSDSRGGGSTNEYRKVKIKMPKAYHYRHSSVSEEREQVPSRSSAHHRLAPATQS
PPQQHQQHSPPVTQSVVKSAPLVAQLSPVAALPLSPRFRRSHPPALHPPSYSPEPMDYEE
HHHRHRDHPDHRINYDRSRSPCGREAVPPPPPAVNALLSNGSILESILLRRQGSGNASAA
VVAAAAAAAKKENGAELLRQEYYDEVYHRERFKEAVQVIVANESHPKPDSSAGSLPVAPA
TLPPPPPSSSAHHRSSPSSSHLLLAPSTTVPVAISTVVYPPYKKLHRYNIPTGSDVRDLL
NSKDPNHLSPDSSCSTTAVNKSIRNESNSSPSNGGQQQHHHHMHHLSGHHPSHGSHPFNS
RSPQPSQSHQFQSSSSSNGSNSRSAPSPHHHPNDSGNGGSSGGGLLYNVNNVAQMFSSAH
FNMYAYGGAGSNASSSGGGSSSHNVGGAHPLASSSSTSSSSGAHIHPHIPMPHSPAASAA
SSSGGNGGDRCGQRDPSESSIRSAASSLSPNYSQALHCHTSPGSGSLSPIGSGSPSPNGS
QGRGYRSLPYPLKKKDGKMHYECNICYKTFGQLSNLKVHLRTHSGERPFKCNVCTKSFTQ
LAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCPAKFTQFVHL
KLHKRLHTNERPYTCGGCQKKYISASGLRTHWKTTNCKPSSLEEEMALERSPTDSAGYDC
NGSDVEEGMEDKDEEMSLDGMSCDSDSLAIQQHHRQGQHEHHHELGVNSTTGRRSQSPDE
GNMHGNGRQQSGNYDADSSRPSVIETANKAPHIIECT
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcaaggaacgaaaatggaagaaggtgcttgggatttggcagagttggccgaa
gaggattttgagcaattggccgtgtacatcgtgccggacgcggtggtcgagccgagcagc
agcaacgcatcggagagagtgaacagggccgagacgtcgctacccagaaatttgacactg
aagccgagtcaggccttgtctgacgtgctgggcgtctggagcagtgattacataccgcga
ggtacccgattcggacctttggttggcgacatttacgccaaggatcacgtgcccaaacac
gccaatcgcaaatacttttggagggtgtacaacaacagcgaagtgttttattacatcgat
ggctacgatacagccaaggccaactggatgcgttacgtcaatccggcctattcgtccgaa
tctcagaatctgatcgcctgccagtacaagatgaacatttatttttacacgaccaaaccc
attctgcccaatcaagagctcttggtctggtactgcaaggaattcgccgaaagactcaat
tatccggtcaccggagatttgatgctgcagcggatccgccagcaagtccaccagaacgac
gaagacggaacggacacggaacagtcgaccgctgagatcaagaaaccaaactgcgacgaa
gggccgatgagtccggcagatggcgcggaagatgttaaagtcaaacagcaacataagaaa
ctcgcagccgacacgacggcactgtccaaagagacggaccagcccggcagcaaagaggcg
gcgcttgccgttgacacgacaaccgcacgccgcgatcacgctgataatcatcatcataac
caccagatgacacccacggcggaaggctcagtccgatcggatgaaggttaccatagcaac
ggctaccatgacgaggttctgacgcctccggaagattccagcgactctgacaacgacaat
tacgtcctggatttcagcaggaaaccttcgtcgtcttccggctcttcgttggcggctggt
ccggctgctggtcagcccagttcgaccagtcgattaagtccgttggcggaggagcccgtc
actcaacagggctctccgcaatcggacagccgtggcggtggcagcactaacgagtatcgc
aaagtcaaaattaagatgccgaaagcgtatcattatcggcacagcagcgtcagcgaagag
cgcgaacaagttccgtcgcgctcctcggcccatcatcgacttgcccctgctacgcaatcg
cctccgcaacaacatcaacaacattcgcctccggtgacccagtcggtggtcaaatcggca
ccgctggtggcccaactctcaccggtcgctgccttgccgctcagtcctcgattccggcgc
agtcatccgcctgcacttcacccgccatcttattcgccggaaccgatggattacgaggag
catcatcatcgccatcgcgaccatccggatcatcgaatcaattacgatcgttcgcgttcg
ccttgcggccgcgaagctgttcctccacctcctccggctgtcaatgcgttgctgagcaac
ggaagcatcctggagagcattttgctgaggcgccaagggagcggtaacgcctccgccgcg
gtcgtagcggccgccgccgctgcggccaagaaggaaaacggagcggaactcctccgccaa
gaatattacgacgaagtgtaccatcgtgaacgattcaaggaggccgtccaagtcattgtg
gcgaacgagtctcaccccaaaccggattcgtcggccgggtctttgcctgtcgctccggcg
acgttgccacctcctccaccttcttcatcggctcatcatcgatcgtcgccttcgtcttcc
cacctgctcctagcgccgtcgacgacagtgcctgtagccatttcgactgttgtgtatccg
ccttataagaaactgcatcgttacaacattcccactggatcggacgtgcgcgatctcctc
aacagcaaggatccgaaccacctcagcccggattcgagttgttcaacgacagccgtcaat
aaatccatccgcaacgagtcgaacagctcgccatctaacggtgggcaacagcaacatcat
caccacatgcaccacctcagcggacatcatccgtctcatggatcgcatccgttcaatagc
cggagcccgcaaccgtcgcagtcgcatcagttccagagcagtagcagcagcaacggatcc
aacagccgatcggctccatcacctcaccaccatccgaatgattccggcaacggcggtagc
tccggcggcggcttgttgtacaacgtcaacaacgttgcgcaaatgttctcgtcggctcat
ttcaacatgtacgcctacggcggagctggatccaatgcatcttcatccggcggaggcagt
agtagtcacaacgtcggcggtgctcatccgctagcgtcttcgtcgtccacctcctcctcg
tccggtgctcacattcatcctcatattccgatgccgcacagtccagccgcgtctgccgct
tcttcgtccggaggcaacggcggagatcgttgcggtcaacgggatccatccgagtcgtct
atacgatcagctgcctcgtcgctcagtccgaattacagccaggcgctgcactgccacaca
tcgcccggaagcggctcgttgtcgcccatcggctcgggcagcccgtcgcccaatggaagc
caaggccgtggctaccgatcgttgccttaccctctgaaaaagaaggacggtaaaatgcat
tacgaatgcaacatttgctacaagacattcggacagctgtccaaccttaaagttcatttg
cggacgcattccggcgagcggcccttcaagtgcaatgtttgcaccaagagtttcactcag
ctggcccacctacagaagcaccatctagtgcacacgggtgaaaaaccgcaccagtgcgac
atttgcaagaagcggttcagcagcacgtccaacctcaagacccatttgcggctgcattcc
ggacagaagccttacgcttgcgatttgtgcccggccaaattcacgcagtttgtccacttg
aaattgcataaacgtttgcacacgaatgaaaggccgtacacgtgcggtggatgtcagaaa
aagtacatcagcgccagcggattgcgcactcactggaagacgaccaattgcaaaccgagt
agcctcgaagaagagatggcccttgaacggtcacctaccgactcggccggctacgattgc
aacggctcagatgttgaagaaggtatggaagacaaggatgaagaaatgagtttggacgga
atgagctgtgatagcgactcgttggccattcagcaacatcaccgtcaaggccagcacgaa
caccaccacgaattgggtgtcaattcgacgacgggccgacgttctcagtcgcccgacgaa
ggaaatatgcacggaaacgggagacaacaatcgggaaactacgacgccgattcgtcccga
cccagcgtgattgaaacggccaacaaagcgccacacattatcgaatgcacatag
DBGET
integrated database retrieval system
