Daphnia magna (water flea): 116921365
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Entry
116921365 CDS
T07514
Name
(RefSeq) tuftelin-interacting protein 11 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116921365
Spliceosome [BR:
dmk03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116921365
Other components
Complex C specific factors
116921365
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF7197
Motif
Other DBs
NCBI-GeneID:
116921365
NCBI-ProteinID:
XP_032783528
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Position
LG4:1222196..1226251
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AA seq
825 aa
AA seq
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MANEEEMESFDVSERDLYDAFQPGQRRFRKMTKNQQIYGVFDEDEEENPRSSSSSKRQNF
SKSSASKDYTAPVDFVKGGIQEGSKKEKIPEKNKLFSYSESEEEEDSSIGFGGRGQTKGK
LSQEKEGKKQPRKMFERFNKDSKTPGSGDLGEWEKHTKGIGAKLLFQMGYQPGKGLGKSL
QGRSEPVEAQVRKGRGAIGIYGSERKNESAKKQASDDEEEKEYKKNLAHWRKDLVEPSSK
KKKVQYLYRTTEEVIEEMSKSGVHRMAREYSEISKAKVIDMTGREQRILQGYSALRTKKT
EEPNDTETVAGIKKDKFQLEKLCYNLDTLVDLCEHEIIQNAKELSYNQDQIVAMEAQMKT
MSVEVSKEITRMEMLTAMLGVLEQLEIKQAANELTLDYLWEQIRNLEQSYPEEYVSSDLA
NVTLTYLIPLMKLRLSTYWRPLDSKSTDEACRLIFQRWRPILEFCNKTQTNSRGGIIRND
SRMDPYHGLLWHAWMPAFRGLVGQWTCKNADPMVDLIESWEQILPNWIMENILDQLILPR
IQKEVDSWNPLTDLIPIHAWIHPWLPRLGSKLEIVYPNIRHKMSQALVAWSPSDQSARSV
LLPWVPVFSKGSMDAFLIKNILPKLQIAITKWDINPSRQELDVWHWIMNWKDLMPVQSLV
QLLVSNFFPKWLQVLVAWLNHHPNYEEIVVWYTGWKALFPPEIAQNPAIQEQFTRALDLM
NRSLAVGGQVDFTPPPVPVMTPLVAAPLPTVAETVVPHGFRELVEYRCAQQGILCIPLVN
RFQAGRPIFRVGNVLCYFDRQVVFVLVNGVWTPVTAQQLLDMAVL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaagaagaaatggagagttttgatgtgtcggagagagatttgtacgacgct
tttcagcctggccagcgtcgttttaggaagatgacaaaaaatcagcagatatatggcgta
tttgatgaagatgaagaagaaaatcctcgttcgtcgtcatcgtccaaacgccaaaatttt
tctaaatcttcggcaagtaaagactatacagcaccggttgattttgtcaaaggtggtatt
caagaaggctcaaaaaaggagaaaatcccagaaaaaaacaagcttttttcatattctgag
agtgaggaggaggaggattcctcaataggttttggtgggcgcggccagacaaaagggaaa
ctgtcccaagaaaaagaaggaaaaaaacaacctagaaaaatgtttgagaggtttaacaaa
gactcaaaaactcctggctccggtgatcttggtgaatgggaaaaacatacgaaaggcatt
ggtgctaaacttctgtttcagatgggctaccaaccaggtaaaggtcttggaaaaagttta
caaggacgaagtgaacccgttgaagctcaagtccgcaaaggaagaggagcaattggtatc
tacgggtctgagcgaaaaaatgaatctgccaagaaacaagcgtcggatgacgaagaggaa
aaagagtacaagaaaaacttggctcactggcgaaaagatttggtagagccatcctctaaa
aagaagaaggttcaatatttatatagaactacggaagaggtaatcgaagaaatgtcaaaa
agtggtgttcatagaatggcgcgtgaatacagtgaaatttccaaagcgaaagttatcgat
atgactggtcgagaacaacgcatacttcaaggctatagcgcactgagaaccaagaaaacc
gaagagccaaacgacaccgaaaccgttgcaggaattaaaaaagacaagtttcaacttgaa
aaactgtgttacaatttggacactctggtggacctttgtgaacatgaaatcattcagaac
gccaaagaactgtcatacaaccaagatcaaatagtggctatggaggcacagatgaaaacc
atgagtgttgaggtttctaaagaaattacccgtatggaaatgcttactgcaatgctggga
gttttggagcagcttgaaattaaacaagccgcaaacgagctaactttagactacctctgg
gaacagataagaaatttggaacaaagctatccggaagaatatgtttcatctgatctagcc
aacgttaccctgacttatctcattccactaatgaagttacgtctgtctacctactggcgt
ccgttggattcgaaatctacagatgaggcttgtcgtttaatttttcaacgatggagacct
attctagaattttgcaacaaaactcagactaacagtaggggtggtattattagaaatgac
agtcggatggatccttatcatggtttattatggcatgcctggatgcctgcattccggggg
cttgtggggcagtggacttgcaaaaatgcagacccaatggttgacttgattgagtcttgg
gaacaaattttaccaaactggatcatggagaatattttggatcaactaattctccctaga
atacaaaaagaggtagacagctggaatccattgaccgatcttattcccattcatgcatgg
atacatccttggcttccacggctgggttcgaaactggaaatcgtataccccaacattcgg
cataaaatgtctcaagccttggtggcttggtcaccttccgaccaatctgcgcggtccgtt
ttattaccgtgggttccagtcttctctaaaggttccatggatgcttttcttattaagaat
attttaccaaagttacaaattgccatcacaaagtgggatattaatcccagtcgacaagaa
ttagatgtctggcattggattatgaactggaaagatctcatgcctgtacagagtcttgtc
cagctacttgtttcaaactttttcccgaagtggttacaggttttggttgcttggctcaac
caccatccaaactatgaagaaattgttgtttggtataccggttggaaggccttgtttcct
ccagaaattgcgcaaaaccccgctattcaagaacaattcactagggcgctggatttaatg
aaccgttctttggcggtcggaggtcaagtggatttcacgccgccaccagtaccggttatg
actcctttagtagctgctccacttcccacagtggctgaaactgtagtaccgcatggcttt
cgtgaacttgttgaatatcgttgcgcacagcaagggatcttatgcattcctctcgtcaat
cgatttcaagctggaaggccaattttccgcgttggaaatgttctttgctatttcgaccga
caggttgtattcgttttggtcaatggtgtatggacccctgtgacagcccagcagttattg
gatatggcagtattgtaa
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