Daphnia magna (water flea): 116921394
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Entry
116921394 CDS
T07514
Name
(RefSeq) la-related protein Larp4B isoform X1
KO
K18763
la-related protein 4
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116921394
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116921394
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Motif
Other DBs
NCBI-GeneID:
116921394
NCBI-ProteinID:
XP_032783564
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All DBs
Position
LG4:complement(1071419..1081582)
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AA seq
1153 aa
AA seq
DB search
MPREQQLDRVGGGGVSRQNRRPPLIKNAGCCLMLDPHYSNSSMYLGDEGTYVCKAFSPRS
YVIQKVGPSSTSPPPPLSAVPSLNPDAVVFESNHLTRQITDTDSIVIDRPTAVTHSSGKD
HTLVNGEAVMPSPVALSVESLPAVDSPDMLSPSPVTVSLVQDTTKTMMNGDQLQSKEGES
GSVQNESVVVSSEIVNNPSAMSPIGDVPVDRLKHALAVQLEYYFSRENLANDAYLVSQMD
GDQYVPIWTVANFNQIKKLTTDIKLITEVLKESPNVQVDDEEMRVRPSHKRCIVILREID
GTTPVEEVRAIFADESLPKILSCEFAHNNVWYITFESDDDAQRAYHYVRDNVKEYKGRPI
NARIKAKPAMNRFFGLPGGVNNGLPGVPPGMSIVPPAVPLPVPVILAPGAPLPVAVAPVP
PTAVPLVAATGTAPSLKNGYPTAVASGTPPPHEGAVAVNPSVNQQQQPHMQPHHQQQPRF
LYAAPPAPGSPYGAQPQLQLYAFHHPSSFYTPTVLQAWPSTTAAGTSLFDLAPVFAMNGL
SPQATFKPSPNPRYPGNMGGRGRGAHRRNLSTHSNANNQNETSVSAHSPGFSQQQQSGGL
SGSAGGNASSTANGVSMSNGPSAAPLPSKNSNSPQAGTSVSSSSPVTSNAGGSGRDNKEA
SAVSGTSHHPLQKQATDGAPAAVGAAGYAPASSDERRHHHEANNERNFGADRGDRQQYGF
GGRGRGRPRGDRGNRGGGYSSYYRGASNGPYRGGSGGGGGGDRERQDRDSRHGSFGSSVG
SGGGSYQSRVNGPHQHHHHGNGNSSTTSPAPDFDLQAVSSFPPLPGLEAGAPSGASLAVS
SNSAGGNAVNSEATPKTEENSTPECVAHLGAVNSSGASGAWGESKLSDVVKGVAKPKSGS
NNGHGPKHLLNGPALVPSGGHNSNAAASSSAASVITPSGGMLGATKATSLESQPSPLPNG
DLAQSTLALTPPTSPGKKEKPFSGSAVQQANTSKPAKAQTSTQQSLIHHHQQPTATGTPP
SDVAPVKVVVAPVHPPGVSYAKMAEQNKDRLEQMAREVKERELEQERERRRVAQTKLAAN
QGKTGARPGGPGQTPGNVAPSTNSSSQGPAAVQQQHQHQYRNDRRKDKQAHHVNINMGSD
IEVGGSRDRSKSP
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagagcagcagctggatcgtgtgggaggaggcggagtgagtcggcaaaacaga
cggccaccactaatcaagaatgctggatgctgtttaatgctagatcctcactacagcaat
agtagcatgtatttgggcgatgagggcacttatgtctgtaaagcattcagtcctcgatct
tacgtcattcaaaaggttggaccctcttcgacgtcacctccaccacctttatcggcagta
ccttcgctgaatcccgacgctgtcgtttttgaaagcaatcatctgaccagacaaataact
gacacggacagtattgtcattgaccgcccgactgcagtaacccactcctcaggaaaagat
catacattggtgaatggggaagcagtcatgccttcaccagtggctctctccgtggaatct
ttgcctgctgtagactcaccggacatgctgagcccgagcccagtgactgtgtcccttgta
caagacactaccaagacaatgatgaatggtgaccaactgcaatccaaagaaggggagagt
ggttctgtccagaatgaatcagtagtggtttcaagtgagattgtgaacaatccttctgca
atgtctcccatcggggatgttccagtcgacaggctaaagcatgctttagctgtgcaatta
gaatactacttttcaagggaaaacctggctaatgatgcttatttggtgtctcaaatggat
ggggaccaatatgttcctatttggactgtggctaacttcaatcaaatcaagaaattgaca
actgatattaagctgatcacagaagttttgaaggaatcaccaaatgtccaggtggatgac
gaagagatgcgcgtgcgacctagccacaaacgttgcattgtgattcttcgagagattgat
ggcactacgccagttgaggaagtacgtgccattttcgctgatgagtctctacccaagata
ctctcctgcgagtttgctcataacaatgtatggtacattacttttgaatcggacgacgat
gcccagcgagcctaccactatgttcgagataacgttaaggaatacaagggccgtccaatc
aatgcacgcataaaggctaagccggcgatgaatcgctttttcggcttgccaggtggagtg
aataatgggttgcctggtgttcctcccggtatgagcattgttccaccagccgttcctctc
cctgtcccggtgatcctggcacctggagctcctttgcctgtggctgtagcaccagtgcct
cccactgctgtccctttggttgctgcaactggtacggctccgtcgctcaagaacggatat
ccaactgccgtggcaagtggaactccgcccccgcacgaaggtgcggtcgctgttaatcct
tcggtaaaccaacagcagcagccacacatgcagccgcatcatcagcagcagcctagattc
ctctatgcagcacctcccgcccctggatcaccgtatggagcacaacctcagcttcagtta
tacgcgttccatcatcccagttcattctacacgccaactgtcctacaggcgtggccttcg
acgaccgccgccggtacttcgctgtttgatttggcaccggtgtttgctatgaatggtctg
tcgcctcaagcaacgtttaaaccgtcacccaatccacgctacccaggtaacatgggcggc
cgaggacggggtgctcatcgtcgaaatttatcgacacattctaatgcgaataaccaaaac
gaaacaagcgtttcggcgcattctcctggattcagccaacaacaacaatctggcggcttg
agcggttctgctggtggcaatgccagcagcactgcgaacggcgtttctatgagtaacggg
ccatccgctgcgccccttccgtccaaaaacagtaactcccctcaagcggggacgagtgtt
tcgtcctcttcaccggtgactagcaacgctggcggcagtggacgtgataataaggaagcg
agcgctgtaagcggcactagtcatcatccgcttcagaaacaggcgactgatggcgctcct
gctgcggtcggagcagcaggttacgctcctgcttctagcgatgaaaggcgacaccatcac
gaagccaacaacgaaaggaattttggagccgaccgtggcgatagacaacagtacggattt
ggcggcagaggccgtggtcgacctagaggtgatagagggaatagaggaggcggatattcg
tcctattatcgcggtgcatcaaatggcccttaccgtggtggcagcggcggaggcggtggt
ggagatcgtgaacgacaggatcgtgactcgcggcacggtagcttcggctcctctgttggt
agtggcgggggaagttaccagtcgcgtgttaatggcccacatcagcatcaccatcatggt
aatggtaatagcagcacgactagcccagcacccgatttcgaccttcaggcagtttcttcg
tttccgcctttacctggtctggaagctggagctcctagtggagcgtctctcgctgtgtca
agcaactctgccggtggtaatgcagtaaactctgaagcgacgcccaaaactgaggagaac
agtacaccggaatgtgtagctcatttaggagcagttaatagtagcggagcaagtggagct
tggggtgagagtaaactgtcggatgtagtgaaaggtgtggccaaaccgaaaagtggctca
aataacgggcatggtccaaaacatctattgaacggccccgctttggttccgagcggaggg
cataacagcaatgcagcagccagtagttctgcagcttccgtgataacgccatcgggtggc
atgttgggtgcaaccaaggcaacttcactcgagagccaaccatctccattgcctaacggt
gatctcgcacagtccactcttgccctcactccgcccacatcccctggaaaaaaagaaaag
cctttttcgggttctgctgttcaacaagccaatacttcaaaaccggccaaagcgcaaacg
tccactcaacaatcgctcatacaccaccatcaacaacccacggcaactggaactcctccc
tccgatgtagcgccggttaaagtagttgtcgctcctgttcatccgcccggcgtttcgtac
gctaaaatggccgaacagaacaaggatcgattggaacaaatggcacgcgaagtcaaagag
cgcgagctagaacaggaacgtgagaggaggagggtagcccaaacgaaattggcagctaat
cagggtaaaactggtgcacggccgggtgggcctggtcaaacacccggtaatgtagcgccg
tcaactaattcgtcaagccaaggaccagcagctgtgcagcagcagcatcaacatcaatat
cgcaacgacagacgtaaagacaagcaggctcaccacgtcaatattaatatgggcagcgat
attgaggttggtggttcacgtgaccgttccaaatctccttga
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