Daphnia magna (water flea): 116921453
Help
Entry
116921453 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dmk03012
]
116921453
Translation factors [BR:
dmk03012
]
Eukaryotic type
Initiation factors
eIF-3
116921453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
Mito_carr
PCI
EIF3CL_C
Motif
Other DBs
NCBI-GeneID:
116921453
NCBI-ProteinID:
XP_032783652
LinkDB
All DBs
Position
LG4:904097..911479
Genome browser
AA seq
1286 aa
AA seq
DB search
MNPIEETSYIRTIEWEMLDKKKFIPLSITSSCMVRTSLYPFTLVKTRLQIQKGNEVYKGT
FDAFRKIVKYEGFKGLYKGFWVNLFSIVSGTFYVLTYENVRHLLQANNVTDSRVRALVAG
GCASLIGQTIIVPIDVISQHLMMVGQKVDGVAQNIKPSLQNGAGKSKTQLALAITKDIYH
IDGLRGFYRGYIASLFTYVPSSALWWTFYHLYQDHLNNLFPSWFPHLGIQCTSAILGGLT
TTTLINPLDIVRARLQVQRLDSIGQTFRILWREERFYTFTKGLTARLIMSTFYSFSIILG
YESVKRWSVKEQYREQIRXHVETVSKLELRDILLSTLKAIRDSLRPRCELISCGLSPGEH
TXKMSRFFGTASDSDTESDVSEEEVQQRPTAVPTYTFSDDEEEQKRIVRSAKEKRFEELK
DIIKLIKNYKKNKDLSKMLSSFEELTKAYQKALPVIAKEEKGVTPRFYIQCLVEVETFLN
ELWEDRDGRKNLSKNNSKSLSTLRQKMRKYVKDFEADVAKFKENPDEEEEDEEAEEKSEA
ESDEESEAEGPAAFRKSESETRTKPLPKVKPIAPEGDESDDSYWDSDGEDETSSSDDDSK
YANLKDKFLKVAGGEDDKKKEKKDRKDKEKAQRRKDREEEEELEMEGGDGWQVQGKATQA
KPKMFAKDADINTGVVLKKLFEILAARGKKGTDRREQVEMLHELYTVSEANNLGIGIAVK
VKFTIISAIFDYNPKICDAMKPEHWEKLLQCIAELLDLLNSRTDIIMGEHVSEDHEKLDQ
AEYDAEQDPSRRFFSVRGCMLTTVERMDEEFVKILKECDAHSNEYVERLKDETRVSAIID
SLQTYIERQSLPAELCRLYMRKIEHMYYKFDPNTIKQSNGESNVEKDTTLAVMDRLCRYI
YVNDKEERIRPRAMLCHIYHYALHDEWYKARDLMLMSHLQETVHLLDPSTQILYNRTMVQ
LGLCAFRHGHIKEAHHALLDIQSSGRAKELLAQGLLLQRQHERTSEQEKIEKQRQMPFHM
HINLELLECVYLVSAMLIEIPYMAAHESDARRRMISKSFHHQLKVSERQAVTGPPESMRE
HVVAASKAMRNGLWKQAHNFIINEKMNAKVWDLFYQADRVRTMLVRKIQEESLRTYLFTH
SSVYDSLSMATLSKMFDLEQPTVHAIISKMVMNEELMASLDEPTQSVVMHRTEPSRLQSM
SLQLADKLANLVDNNERILKIRQGPFGFSRGNQNVRFGDRPQYGNRQGQQGGGGNWQRRG
GDNRDNRDNHRDNRDNHRDNRDRHNN
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctatagaagaaacatcttacattcgaacaattgagtgggaaatgttagacaaa
aagaaatttatccccttgagtattactagttcatgtatggttagaaccagcctttatcct
tttaccttagtcaaaactaggttacaaattcagaaagggaatgaagtttataagggtacc
tttgatgcttttcgaaaaattgtcaagtatgaaggtttcaaaggactgtacaaagggttc
tgggtcaatttgttttcaattgtttcgggtactttctatgttttaacttatgaaaatgtc
aggcatttgcttcaagcaaataatgtaactgactctagagtaagggcacttgtagctggg
ggctgtgcttcccttattgggcagacaataattgtaccaattgatgtcatcagtcagcat
ttgatgatggtgggtcaaaaagtggatggtgtagcgcaaaatatcaagccaagtcttcaa
aatggagcagggaaaagtaaaacacaactggcacttgcaataaccaaagatatttatcat
atcgatggtttgcgtggtttctaccgtgggtatatagcatcgttgttcacctacgttccc
agttcggcactttggtggaccttctatcacctataccaagatcatctcaacaacctattc
ccttcgtggtttcctcacctcggaattcagtgcacatccgcaatccttggaggtttaact
acaacgacgttgataaatcctttggatattgtgcgagccaggttacaggtgcaacggttg
gattcgattggacaaaccttccgtatcttgtggcgagaggagcgtttttatacgttcacc
aagggattaactgcccggctcatcatgtctacattttatagcttttcgatcattctgggt
tacgaatcggtcaaacggtggagtgtaaaagagcagtacagggaacaaatcaggtgacat
gttgagacagtatccaaactggaacttcgtgacattcttctttcaactcttaaagctatt
cgagattccttgcgtcctcgttgtgagttaatatcttgcggactttcacctggtgaacac
acanaaaaaatgagtcggttcttcggtacagcctctgattcggatacagagagtgatgtt
agtgaggaagaggtacagcagcgtcccacagctgtccccacttatacattcagtgatgat
gaagaagaacaaaaaagaattgttcgttcagccaaagaaaaacgatttgaagagctgaag
gatatcatcaagctgataaaaaactacaaaaagaacaaagatttgagcaagatgctgtca
tcatttgaagaattgactaaggcataccaaaaagcattgcctgtgattgccaaggaagaa
aaaggagtaactcccagattctacatacaatgcttggtggaagttgaaactttcttaaat
gagttgtgggaagatagggatggaagaaagaatctgtcaaaaaataactcaaagtcactg
agtacattgcgtcaaaaaatgcgaaagtatgtaaaagactttgaagcagatgtagcaaag
tttaaggaaaatccagatgaagaggaagaagatgaagaggctgaagaaaagtctgaggca
gaatcagatgaagaaagtgaagctgaaggacctgctgctttccgtaaatctgagtcagaa
acgcgtaccaaaccgttacctaaggtgaaacccattgcccccgaaggtgacgagagtgat
gactcgtattgggactcggacggtgaagacgagacatcttcatcggatgatgactctaaa
tatgccaacttgaaggataagttcttaaaagtggctggtggcgaagatgataagaaaaag
gaaaagaaagatcgcaaggacaaggagaaggcccaaagacgcaaagatcgtgaagaagaa
gaagaattggagatggagggcggagatggctggcaagtacagggtaaggctacgcaagct
aagccaaaaatgtttgcaaaggatgccgacatcaacactggggttgttctgaagaagttg
ttcgaaattctggctgctagagggaaaaagggcactgatcgtcgtgagcaagtagagatg
ttgcatgagctttacacagtatcagaggccaacaatcttggaatcggcattgcggtgaaa
gtaaagttcacaatcatttctgccatttttgactataacccaaagatctgcgacgctatg
aaaccggagcattgggagaagctgttgcaatgtatcgctgagcttctggatcttctaaat
tcgcgtaccgacataatcatgggagaacacgtttcggaggatcatgagaagctggatcag
gcagaatacgacgctgagcaagatccatcgcggcgcttttttagtgtccgtggatgcatg
ctgactactgtagagcgaatggacgaggaatttgtaaaaattctcaaggaatgcgacgcc
cacagtaacgagtatgttgagagacttaaggacgagacccgagtttcggcaatcattgac
agtctccagacgtatattgaacgacagagcttgcccgcggagctgtgccgactttacatg
cggaaaatcgagcatatgtattacaaatttgacccaaatactatcaagcaaagcaacggt
gagtcaaatgtagagaaagataccactctggcagttatggaccgcctatgtcgctatatc
tatgttaacgataaagaagaacgaatccgacctagagctatgttatgtcatatttaccac
tatgctcttcatgatgaatggtataaggcgcgtgacttaatgcttatgtcacatcttcag
gaaacggttcatttactcgatccttcgacccaaattctttataatcgaacaatggtccaa
ttgggtttgtgtgctttccgccatggtcatatcaaggaggcccaccacgcgttgttggac
atccagtctagcggccgtgccaaagagctactagctcaaggccttctcctccaacgtcag
catgaacgaacgtctgaacaggagaaaattgaaaagcaacgtcagatgcctttccacatg
cacatcaacttggaattattggagtgcgtctatttggtgtcggctatgcttatagaaatt
ccttacatggctgctcatgagtcagatgctcgtcggcgtatgatttccaaaagcttccac
caccagctgaaagttagtgagaggcaggcggttacgggacctccagagtcgatgagagaa
cacgtagtggctgcttctaaagccatgcgaaatggactttggaagcaggctcataacttt
atcatcaatgaaaagatgaatgctaaagtgtgggatctgttctaccaagctgaccgagtg
cgtacgatgttggttcgcaagattcaagaagaatccctacgaacatacctcttcactcac
tcatcagtttacgactctttatcgatggctacattatccaaaatgtttgatcttgaacaa
ccgaccgttcatgccatcatttcaaaaatggtcatgaacgaagaacttatggcttcgttg
gatgaacccacacaaagtgtggtaatgcataggactgaaccttcccgtttgcaatctatg
tctctccaacttgctgataaattagctaatctggttgataacaatgagcgaattctaaaa
attcgtcaaggtccgtttggcttctcccgtggaaaccaaaacgtgcgcttcggcgaccga
ccacagtacggcaatcggcaaggacaacaaggaggcggaggcaattggcaacgccgaggt
ggagataatagggataatcgagacaaccatcgggataaccgagataaccatcgggacaat
cgagaccgtcataacaattaa
DBGET
integrated database retrieval system
