Daphnia magna (water flea): 116921471
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Entry
116921471 CDS
T07514
Name
(RefSeq) tonsoku-like protein isoform X1
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116921471
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116921471
Transcription factors [BR:
dmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
116921471
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116921471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
TPR_12
Ank_5
Ank_4
TPR_7
TPR_8
TPR_1
LRR_6
TPR_2
LRR_8
RPN7
TPR_10
LRR_4
Motif
Other DBs
NCBI-GeneID:
116921471
NCBI-ProteinID:
XP_032783672
LinkDB
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Position
LG4:747061..752656
Genome browser
AA seq
1400 aa
AA seq
DB search
MNSYTFKDVSKLLKVKAKAKSKGELRELASCCNVLGELYQQQGKYEDAIAEHEEERKLCK
QLNDCIGIGIAHRKIGEALNELGQYENALKHQQNYLALAKSVDNKLEIQRALATIGRTHF
CHAEALTTNNRVLYDKALDSSKFSYQKSLELCERLKVAVSERDYMQMNSRLLLNLGLVCD
LQQQDSAAVNYFKKASYIADKYNFREDLHRCHYSLALFYQRRKNFSQSKREAEMAEKVAF
QLKDKALICDDLALKAQLFVIMADFESARRYLLKAYRQKTPVIQDHERIESDLRSAIKLC
KLQDMCCILSANEEEKLLRLHEKMGDLCSSLKAYPRAIDFYLKMLTKAQELRWTAKDINP
IYVSLSQTYMDLKDYKNAIKYYKKELENYEENPAESCRTLLNIANALEEDGATYYELEPL
YQQALDLAVKAENPRLKATTLNSLAVLHEMNGYMEKSQEAMASVNQICSDHNIDLDDESE
APESQTIRNNLFDFEDEIDLDEICVDDDSDEESESLDNNRGRRRPKKNIEKLNVKGETAL
HRACIKQDIDLVRLLLQQKHTVNVRDNCGWTPLHEACNYGNVEIVQLLIENGAMVNDRGG
KHCEGVTPLHDAASCGHIDVMETLLRNGANPLSQTDAGESVYECLLKWRLRTGGDLDSAT
LKECLNMERKLSDSMKKANQVVPSMKEIEHKHSSTSALIPEEDIIGNAFKEVDLTRVGPS
EPEMDGPPKFRESKDKRLASSAAQKEYAEAMKVIGSSSSARRSVVVSGPTKRSRIHQPAL
VLEDELVDEWIENDLPSPTRKSSKKSNFSFPVHKPSNQSDKEKTPTSTSSRLNKHSSRLS
LSNRRKSGAPSLNFEDITVSDDDVEVEVMLPSAKRAKPSPSFIHSSDDSNDRASPILSVS
KRLKKPVQLSMYAFAEVNAHTEDNIQAPKKAVNKPFSSVQQQNPSTSVLKLYVRIQDKVL
LIPVERSKSVQWLSDEAARRYYNMTGLNPVLSLHTMDGAVLNGEDEITLILQDGDKIVGE
MVKWDLQPLPERYANLCRQLEVVRLGEVDSLLTNAQTGGKLSLNLPLGPSLLPVVKALRY
QESLWDLDLSSSKLDDHVLQSLCEALSTLPHLVNLSLKGNLITAAGLTRLAESLQEENVT
GLKKLQRLNLSYNPIGDGASYPLTTCFQHMSALRSLQMESCDLTDRFLSDRISPVLKRKK
LEDLSIGFNEFTSSAIKSWMEVLDFNCLKYLSLQALPCDRLVNILCNSIQAVESCLLIEM
DLSHCNLTDSCVEQLVHIFNHTLQLKKLTLKNNNSLGIDAVADLLDYCRMKWVHIEEVDF
LGCALTRSDSKDNGRCVESLRYFLAWSKSLHRLSLSFSRHKSDPTWIPLLTEVWIAGHDS
EVLVKQPTEHQLILTTLSCA
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtacacgttcaaagatgtttcaaagcttttgaaggtaaaagctaaagccaaa
tccaaaggcgaattgcgagaacttgccagttgctgcaatgttctcggtgaactatatcaa
caacagggaaagtatgaagatgcaatcgccgaacatgaggaagagcgtaaactatgtaaa
caactcaatgattgcattggaattggcattgcccatcgtaagattggtgaagccttaaat
gaacttggacagtatgaaaatgctttgaaacatcaacaaaattatctagccttagcaaag
agtgttgacaataagttagaaattcaacgggctcttgccaccattggtaggacacatttc
tgccatgctgaagcactgacgactaacaacagagttctttatgataaagcattagatagc
tctaaattttcctaccaaaaaagcttggagctgtgtgagaggcttaaagtagcagtttca
gaaagagactatatgcaaatgaattccagactactccttaatttgggccttgtctgtgat
ctgcagcagcaagacagtgcagctgtgaattattttaaaaaggcaagctacatagctgac
aagtacaatttcagagaagatctgcatcgatgtcattactcactggcattgttctaccaa
agaaggaaaaatttcagccaatcgaaaagagaggcagagatggctgaaaaagttgctttc
cagcttaaagataaggcactcatttgtgatgatcttgccttgaaagcgcaacttttcgtc
attatggctgattttgaatctgcccgaagatacttacttaaagcatacagacaaaaaact
ccggtcatccaggaccacgaacgaattgaaagtgacttacggtcagcaattaagctgtgt
aagttgcaagatatgtgctgtatcctttcggcaaatgaagaggagaaattgttgagactg
catgaaaaaatgggagatctttgttcttcactcaaagcttaccccagggctattgacttc
tacctgaaaatgttgactaaagctcaggagcttaggtggacagccaaagacatcaatcca
atttatgtgtcattaagtcaaacttatatggacctaaaagactacaaaaatgccattaaa
tactacaagaaggaactggaaaattacgaagaaaatccagctgagtcttgccgcacgctt
cttaatatagcgaatgccctggaagaggatggcgcaacctattacgagctagaacctttg
taccaacaagcgttggacttagcagtgaaagctgagaatccacggttaaaagccactact
ttgaattctttggcagtccttcacgaaatgaatggctacatggaaaaatctcaggaagct
atggcgtctgtaaaccagatttgttctgaccacaacatcgatctcgatgatgaatcagaa
gctcctgaatcgcaaactattcgaaataatctctttgatttcgaggacgagattgatttg
gatgaaatctgtgtagacgatgatagcgatgaagaatcggagtcgttggataataacaga
ggaagaaggagaccaaaaaagaacatagaaaagcttaacgtgaaaggcgaaacagcactc
catcgggcttgcatcaaacaagatatcgatttggtccgccttttgttacaacagaaacat
acagtcaatgttcgtgataattgtggatggactccacttcatgaagcatgtaattatggt
aatgttgagatagtgcaattactgattgagaatggagctatggtgaatgaccgagggggt
aagcactgcgaaggtgtcacccctttacacgatgccgcttcttgcggtcacatcgatgtt
atggaaacattactacggaatggtgctaatccattgtcacaaactgatgccggagagtcg
gtatacgaatgtttattgaaatggagactacgaacgggaggtgacttggattctgcaacg
ctcaaggaatgcctcaatatggaacgtaaactatcagattctatgaaaaaagcaaatcag
gttgttccgtcaatgaaagaaatcgaacataaacattcaagcacttcagccctcattccg
gaagaggacattattggaaatgctttcaaagaagttgatttaacccgtgtgggcccaagc
gagccagaaatggacggccccccaaaattcagagaatctaaagataaacgattggcatct
tcggcagctcagaaagagtacgccgaagcaatgaaagtgattggaagctcgtcctctgcg
cggcggtcagtagtagtgagcggtccgactaaaaggagtcggatacaccagcctgcacta
gttttggaagatgaactagtagacgaatggatcgaaaacgatcttccatctccaacgcgg
aagtcgagcaaaaagtcgaatttctcattcccagttcataaaccgagtaatcaatcagac
aaagaaaaaacgccgacatcgacttcctctcgactcaacaagcattcatcaagactaagt
ctgagtaacaggagaaaatcaggcgccccatctttaaattttgaagatatcacagtcagt
gatgacgacgtagaggtggaggtaatgctgccttctgcaaaacgggctaaaccctcccca
agttttattcattctagtgatgatagcaacgatcgtgcttcgccaatactgtcagtatca
aaacggctgaaaaagcccgttcaactgtccatgtatgccttcgctgaggtaaatgcccat
acagaggacaatattcaagcacccaaaaaagctgttaacaagccgttcagctcggttcag
cagcaaaacccttctacaagcgttctgaaattgtacgtgcggattcaagacaaggtattg
ctcatcccagtggaacggagcaaatctgtgcagtggctttcagacgaggcagcgaggaga
tactataatatgactggtctgaaccccgttttatcgcttcatacaatggacggcgcagta
ttgaatggagaagatgaaatcacattgatacttcaagatggagacaaaattgttggcgaa
atggtcaaatgggatctgcaacccttaccagagcgatatgccaatttgtgtcgccaactt
gaagttgttcgacttggcgaagtcgactcgttgttgactaatgcgcaaaccggtggcaaa
ttatcgttaaatctacctttgggtccctcccttcttcccgtcgtcaaagcactgcgatat
caggaaagcttatgggatttggatctttcttcgtcaaaactggacgaccatgttttacag
agtctttgtgaagccctgtctacgctgcctcacttggtgaatctcagcctaaagggcaat
ttgataacggcagccggcctcactcgcctagcagagagcttacaagaggaaaacgtcaca
ggattgaagaagctgcaaaggcttaacttgagctacaacccaattggagatggggcttcg
tatccactaaccacctgttttcaacacatgtcagcgttacgcagtttgcaaatggaatcg
tgcgatctgacggatcgtttcctaagcgaccgcatttctcctgtgttaaaacggaaaaag
cttgaagacctaagcatcgggttcaatgagttcacgtcctctgccattaaatcgtggatg
gaagtgctggattttaactgcttgaaatacctttcattacaagctctcccttgtgatagg
ctggtgaacatattgtgcaatagtatccaggccgtcgagagttgcctactgattgagatg
gatttgtcacattgtaatttgacggattcctgcgttgaacaactagtgcatatcttcaat
catacgctacagctgaaaaaacttaccctcaaaaacaataacagcctagggattgatgcg
gtggctgacctgcttgattactgtcggatgaagtgggtccacattgaagaagtagatttc
cttggctgcgcgctgactcgttcagattcaaaagataacggaagatgcgttgaatcactc
cgctacttccttgcatggtccaaaagtttgcatcgacttagtttgtcgttcagtagacat
aaaagtgaccccacatggatcccgcttctcactgaagtttggatagcgggccatgacagc
gaggtactcgtaaaacaacccacagaacatcaactaatattgactacgctcagctgtgca
tag
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