Daphnia magna (water flea): 116921483
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Entry
116921483 CDS
T07514
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116921483
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dmk01001
]
116921483
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116921483
03036 Chromosome and associated proteins [BR:
dmk03036
]
116921483
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
116921483
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116921483
Protein kinases [BR:
dmk01001
]
Serine/threonine kinases: Other
TAF1 family
116921483
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116921483
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
116921483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
116921483
NCBI-ProteinID:
XP_032783693
LinkDB
All DBs
Position
LG4:3395737..3402251
Genome browser
AA seq
1826 aa
AA seq
DB search
MPSSDEENENHSSDDDGDLSNSPDNNDDDSQSSQENGGNRRPSGLNLTGFLFGNIDKEGK
LEADILDDESKRQLATLGRFGFMSMLETVIREGDSGSKDHSADSDDDGAKSPTAEDYSDI
NELAEDEGGPYLDDSILMPPPPTPTSKSLSASEAKKRLETPLAAMLPSKYANIDVRELFP
DFRPDKVLCFSRLFGPGKPSSLPQIWRGVKKKRKKKKLDEDFDEEQVEPAEIVFKFGPTP
TPDKCRPDDEERFLKPLEDPNALSNIKNSDDDKGPSVADWRFGPAQLWYDILGVPETGEE
FDYGFKVKRKDPNSADEDGQELPSFKFPDEAFHMITQLNWEDDVVWNGDDIKHKVMQKLN
AKGGLASGWLPTATNRLATQKAAPAATPATGKAATPGAKGGAKSANNKPGGAAAAAAAAA
AAAAAAAAVEEAADDVWHSIFPVENDELVFGQWEDDIIWDSENMTEMPKPKILTLDTNDE
NVILTIPDDIDPATKQAYVQQPVKVKIPHPHVRKSKLLLGKAGVINVLEDDSPPPPSENN
DKDPYNISNDEFYAAKATEAAIKVSTGGNIIQHSTPVVELQAPFIPTHLSIMKLRSFHRP
PLKRYSHGPLATPGPHPVHPLLRHIRKMAKQRELERMAAGGGDIFFMRTPEDLSGKDGDL
ILLEYCEEHPPLISQVGMSSRLKNYYKRKAVKDTGPPQYKYGETAYAHTSPFLGTLHPGQ
SIQAIENNMYRAPIYEHQLAPTDFLVIRTRTTYHIREVDAFYTVGQECPLYEVPGPNSKR
ANNFTRDFLQVFIYRLFWKSPDTPRRIRMDDIKRAFPAHSESSIRKRLKLCADFKRTGVD
SNWWVLRPDFRLPSEEELRALVSPEQCCAYFSMIAAEQRLKDAGYGEKFLFAPEQDDDED
QQLKMDDEVKVAPWNTTRAYVQAMKNKCLLQLTGPADPTGCGEGFSYVRVPNKPTINKEE
LESQPKRIVTGTDADLRRLSLNNAKAILRKHGVPEEEIKKLSRWEVIDVVRTLSTEKAKA
GEEGMDKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLASGEVLSTDEGESEEEEDISDI
EEMGKNIENMLANKKTSSQLSREREEHERRELQKMILGEGSGGMKKDKSRVGLDDEDSSS
QPPLAGAGQAGRVLKIFRTFKNAEGKEYTRVELVRKPAIIDTYVRIRTTKDDAFIKQFAT
PDEHQKEEMKREKRRIQEQLRRLKRNQEKEKLGIVNNRRRKVKMKPDLKMKCGACGQVGH
MRTNKACPLYQNTTPLPPMVVAMTEDQEEEIEKQIFSEDEELVNVDGTKVKLSGKLVKHA
EEIKRRSLVLKVPKEAMSGRKRRRAGTVTHCDYLSRHTTKTANRRRTDPVVTLSTMLEEI
LNEMRELPDVQPFLFPVSSKTVPDYYRIVTRPMDLQTIREALRQKRYQSREDFLSDVNLI
FENSTLYNGEKSILTTAAKRMLDLCIERLSQKEERFMRLEKAINPLLDDDDQVAFSYVLD
NIINGKLKPLPEAWPFLKPVNKKFVKDYYSIVKNPMDLETVAKKVKAHKYHNREEFLYDV
DLILENSIAYNGEESQFTEKARALGRICRETLEEYDEHLTQLESNIRIAQKKAMEQAEND
FLDVGEEGYEDEYMMDSMDMVDLPDRPGEDEWDPDVETPVRAPKKSRKSSSINFAQPGPS
TAVKPKGKRGRPAKNKGSPGGKNNSPRVSLSSPRGSKRKASDVLDDLQFSASEKEEEEDE
EDDDEELEEVAMDVDVDANYDPEAEFFSCGPSKDEDIRDDLQVSESEEEGEIRDDQPAVN
NKGRSRHHSNRPSSSRDEDDDGGLWF
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtagtgacgaagaaaacgaaaatcatagcagtgatgatgatggggacttgagc
aatagtccagataataatgatgatgattcgcagtcatctcaggaaaacggcgggaataga
agaccatcaggattgaaccttaccggcttcctatttggtaacatcgacaaggagggtaaa
ctcgaagcagatatccttgatgatgaatctaaacgtcagctggccactcttggacgattt
ggcttcatgtcaatgcttgaaactgtcatcagagaaggtgattctgggagcaaagatcat
agtgctgattctgatgatgatggagctaaatcccctactgctgaagattattctgatatc
aatgagttggcagaagatgagggagggccttacctggatgattcaattctcatgccacca
cctcctacaccaacttccaaaagcctgtcggctagtgaagcaaaaaaaaggcttgaaaca
ccgttggcagccatgctcccttccaaatatgcaaatattgatgtgagagagctattccca
gatttccggcctgacaaagtcctgtgcttttccagactctttgggcctggtaaaccaagc
agcctccctcagatttggagaggagttaagaaaaagagaaaaaagaaaaagttagatgaa
gattttgatgaagaacaagttgaacctgctgaaattgttttcaaatttggtccaacccct
actccagataaatgcagaccagatgatgaagaacgttttctaaaacctctggaagatcct
aatgctcttagtaacattaaaaactctgatgatgacaagggcccaagtgttgcagattgg
aggtttggtccagctcagctttggtacgacattcttggagttcccgaaacaggcgaagag
tttgactatggttttaaagtaaagcggaaagatcccaatagcgccgatgaagatggccag
gagctgcctagttttaaattcccagatgaagccttccatatgattacacagttaaattgg
gaagacgatgtagtctggaacggtgacgatattaagcacaaagtgatgcagaaattgaat
gcaaagggtggtttggcctctggatggttacctacggctacaaatcgtctggcaacacag
aaagctgcccctgctgcaacccccgcaactggtaaggctgcaactcccggagcaaaaggt
ggtgcaaaatcagccaataataaacccggaggagcggcggcagcagcagctgctgctgct
gcggccgccgcggctgctgcagccgttgaagaggcagccgacgacgtttggcactcaatt
ttcccagtcgagaacgatgagttggtgtttggccaatgggaagatgatatcatatgggac
agtgaaaacatgacagagatgccgaaacccaagattttaacgctcgacacgaatgatgaa
aatgtcatcttaacgattcctgacgatatcgatcctgccaccaaacaggcctacgtgcaa
cagcctgtcaaagttaaaattccccatcctcatgttcgaaaatccaaattactgctggga
aaagctggcgtcattaatgtattggaagatgattcgccaccccctccttctgagaataat
gataaagatccgtacaacatctcaaacgacgaattttatgcagcgaaagcaactgaggca
gctattaaagtcagtaccggtggaaatatcattcaacattcgactcccgtggttgaactt
caagctccttttattcctacccacttgtctataatgaaactgcgaagtttccatcgtccg
ccgcttaagcgctattcccacggaccattggcaactcctggtcctcatccagttcatccg
cttctgcggcacataagaaaaatggctaaacaacgggagctcgagcgaatggctgctggc
ggtggtgacatatttttcatgcggacacctgaggacctcagtggtaaagacggtgatctc
attctgctcgaatactgtgaggaacatccgcctttgatcagtcaagtgggcatgtcgtcc
aggctaaaaaactactacaaacgaaaagcggtcaaagacactggacctccacagtacaaa
tacggtgaaacagcgtatgctcacacgtcaccgtttttgggtacactccacccgggccag
tccatccaagccattgagaacaatatgtatcgtgcgccaatttacgagcatcagctggct
ccaacagattttctggttatccggacgcggacaacgtaccacatccgcgaagtcgatgct
ttctatactgtcggccaggaatgcccgctgtacgaagtgcctggtccaaactctaaacga
gcaaataacttcacccgtgacttccttcaggtattcatttatcgactcttttggaaaagt
cctgacactccacgtcgtattcgaatggacgacattaaaagggcttttccagcccattcg
gaaagcagcattcgcaaacgactgaaactttgtgcagacttcaaacgtactggagttgat
tccaattggtgggtactgcgaccggatttccggttaccttctgaagaagaactgcgggca
ttggtatcgccggagcaatgttgcgcatatttcagcatgattgctgccgaacagcggtta
aaagacgctggatacggcgaaaaattcctctttgctccggaacaggatgacgatgaagac
cagcaactaaaaatggacgatgaagtcaaggttgccccttggaacacgactcgcgcttac
gtccaggctatgaaaaacaaatgcttactgcaattaacgggtcccgcggatcctaccggt
tgcggtgaaggtttctcctacgttcgtgtaccaaacaaaccgacaattaacaaagaagag
ttggaatcccaacctaaacgtattgtgacgggtactgacgcagatttacgtcgattgtct
ctgaataacgccaaagcgatcttacgaaagcacggtgttcccgaagaggaaattaagaag
ctttctcgttgggaagttatcgatgttgttcgaacgctgtcgacagaaaaggccaaagcc
ggcgaggaaggaatggacaagttctcgcgtggtaatcgtttttctatagccgaacatcag
gagcgatacaaggaagaatgtcagcgcatctttgatcttcaaaatcgcgtcttggcttcg
ggcgaagtattgtcaactgacgaaggtgaaagcgaagaggaagaagacatttctgatatc
gaagaaatgggtaaaaacattgaaaacatgctggctaataaaaagacttctagtcaatta
agtcgcgaacgcgaagaacatgaacgtcgcgaattgcaaaagatgatccttggcgaaggc
tcgggaggaatgaagaaggacaagagtcgcgtgggactcgatgatgaagacagctcgtcg
cagcccccactggctggagccggccaggctggccgagtgctcaaaattttccgaacattt
aaaaatgccgagggtaaagaatatacccgagtggaattggttcgcaaaccggccatcatc
gacacctacgtccgtattcgaacaacgaaagatgatgcatttattaaacaatttgccaca
cccgatgagcaccagaaagaagaaatgaaacgtgagaaacgtcgaatccaggagcaactc
agacggttgaaacgtaatcaggagaaggagaaattgggtattgtgaacaatcgtcgtcgc
aaggtcaaaatgaagcctgatcttaaaatgaaatgtggtgcttgtggccaggtgggtcat
atgagaaccaataaagcttgcccactttatcagaataccactccactaccgccaatggtt
gttgccatgacggaagaccaagaagaagaaattgagaaacaaatctttagcgaagatgag
gaactcgtcaacgttgacggcactaaagtgaaactgtcgggcaagctggtcaagcacgca
gaagagattaaacgacgttctctagtgcttaaagtacccaaggaagccatgtcaggtcgg
aaaagaagacgggctggaacagttacgcattgcgattacctgagtcgacatacaactaaa
actgctaatcgaagacgaactgatccagtagtaacgctttccaccatgttagaagaaatt
ctaaatgaaatgcgtgaactacccgacgtccagccattccttttcccggtgagcagcaag
acggtaccggactattaccggatagtaactcgaccaatggaccttcaaactattcgggaa
gccttgcgccaaaagcgttaccagagtcgcgaagactttttgtctgacgtcaatctcatt
tttgagaattcgaccttgtacaatggcgagaagagtatcttgacaacagcagccaagcga
atgttggacctttgcatcgaacgtctctcccaaaaggaggaaaggttcatgagactcgaa
aaggctattaatccattactggacgatgacgatcaggtggccttttcttacgtattggac
aacattatcaacggaaagttaaaacctttgccagaagcttggcctttcctgaaacctgtc
aacaaaaagttcgtcaaagattactacagcatcgtcaaaaatccaatggatttggaaacg
gtggccaagaaagtaaaagcgcacaagtaccacaatcgcgaagagttcctgtacgatgtc
gaccttatcttggagaatagtattgcctataatggagaggaatctcaatttaccgagaaa
gccagagctcttggacgcatttgtcgtgaaactcttgaagagtacgacgaacatttaact
cagcttgagagtaacatccgcattgcgcagaaaaaagccatggaacaagctgaaaacgat
ttcctcgatgtgggcgaagaaggttacgaagatgagtacatgatggattccatggacatg
gttgatctaccagatcgtccaggtgaagacgaatgggatccagatgttgaaacacccgtt
cgtgctcccaaaaagagccgaaagtcttcatctattaattttgcccaacctgggccttca
actgctgtcaaacccaagggcaaacgcgggcgtccagcgaagaataaagggtcaccgggt
gggaagaacaattctccgcgggtcagtctctcttcaccccgcggatccaaacggaaagcg
agtgacgttttggacgatcttcagttttctgctagtgagaaagaagaggaagaagacgag
gaagatgacgatgaagagttagaagaagtggctatggatgtggatgtcgatgccaattat
gatccagaagcggaattcttttcttgtggtcctagtaaagacgaggatatccgtgatgac
ttgcaagtcagcgagtcggaggaagaaggtgaaattcgcgacgatcaacctgccgtcaat
aataaaggacgaagtcggcaccattcgaaccgaccttcgtcttcccgtgatgaggatgat
gatggaggtttgtggttctaa
DBGET
integrated database retrieval system