Daphnia magna (water flea): 116921568
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Entry
116921568 CDS
T07514
Name
(RefSeq) probable serine--tRNA ligase, cytoplasmic isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116921568
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dmk01007
]
116921568
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116921568
Enzymes [BR:
dmk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
116921568
Amino acid related enzymes [BR:
dmk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116921568
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116921568
Prokaryotic type
116921568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Arc1p_N_like
DUF4455
NOD
Motif
Other DBs
NCBI-GeneID:
116921568
NCBI-ProteinID:
XP_032783803
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Position
LG4:444194..447678
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AA seq
573 aa
AA seq
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MVLDIDLFRADKGGDPEKMRENQKKRFKDVKLVDLIVEKDNQWRQLRFQLDQLNKLKNSA
SKEIGEKMKLERKKPPVSKSESPEAKGPYQNLSSPQTLENLNSHLQSHSYINGYTPCHLD
VAIHASMPKPVLSSYPHINRWYHHISAIEGSIQKKEPVGDDVLPDGLESLMASMSLTGEQ
LKPLTVNQIKKVSTLMDKAIAETNKKLDETEKERNDGLREMGNHLHPTVHVCDNEDENVV
ERTFGDCETRKKYSHVDLIHMVEGMDAERGTVTAGGRGYYLLGPMVFLEQALIQLALRIL
QTKGYIAMGTPFFMRKDIMQDVAQLSQFDDELYKVIGKGSEKAEDKEVDEKYLIATSEQP
IAAFHRDEWIKETELPKRYAGISSCFRQEVGSHGRDTRGIFRVHQFQKVEQFCITSPHDN
LSWQMMDEMIGNAEAFYQALNIPYRIVNIVSGALNNAAAKKLDLEAWFPGSGAFRELVSC
SNCLEYQSRRLLIRYGQTKKMNAQTDYVHMLNATMCATTRVICAILELNQTETGIKIPEV
LKSFMPPAYAEEIPFTKPAPIDEMELKKQQKKK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggttctcgatatcgatctgtttcgagccgacaagggcggggatcccgagaagatgagg
gagaaccaaaagaaaagattcaaagatgtaaaacttgtagatttgattgttgaaaaagac
aatcagtggagacaattgcgattccaattggatcagctaaataagctgaagaattctgcc
agcaaggagattggtgagaaaatgaagctggaacgcaaaaagcctcctgtctcaaaatca
gaatctccagaggccaagggcccttaccaaaatctgtcaagtccccaaacattggaaaat
ctgaattcccacttgcaatctcatagctacatcaatggatacactccatgtcatttggat
gtagctatccatgcttcgatgcctaaaccagtgctctcgagctacccacacataaaccgg
tggtatcatcacatcagtgcaatagaaggttctatccagaaaaaagaacctgtaggtgat
gatgttcttcctgatgggcttgaatcactcatggcttcgatgagccttactggagagcaa
ctaaaaccattgacggtcaaccagatcaagaaggtcagcacactcatggataaagccatt
gctgaaacgaacaagaaattggatgagacggaaaaggaaaggaacgatggtcttagagaa
atgggcaatcatcttcatcccaccgtccatgtttgcgataatgaggacgaaaatgtggtg
gagcgaacatttggcgattgcgaaactcggaaaaaatactcacatgtcgaccttatccat
atggttgagggtatggatgcggagcgaggtaccgtgactgctggtggtcgaggttactac
cttctcggtcccatggttttcttggagcaggctttgatccaactagcacttagaattttg
caaaccaagggctacattgccatgggaacgccctttttcatgcgcaaagacatcatgcaa
gatgtcgctcagctctcgcagtttgacgatgagctctacaaggtcatcggtaaaggcagc
gaaaaggctgaagataaagaagtagacgagaaatacttgatcgctacctcggaacaaccg
atcgccgccttccatcgcgacgaatggatcaaggaaacggaattgcccaaacgctatgct
ggaatctcgtcttgcttccgtcaggaagtgggttctcacggccgcgatacccgcggcatc
ttccgcgtccatcaattccaaaaggtggaacaattttgcatcacctcgccgcacgataac
ttgtcgtggcagatgatggacgaaatgattggcaacgctgaggctttctaccaggccctc
aacatcccctatagaattgtcaacattgtttcaggagcgttgaacaatgctgctgccaag
aagctcgatcttgaagcttggtttccaggctcaggtgcgttccgcgaattggtctcgtgc
tcaaactgcctagaatatcagtcacgccgtttgctcattcgctacggtcagactaagaaa
atgaacgcccagacggattatgtgcacatgctgaacgctacgatgtgcgccactactcgc
gttatttgcgctattctggaactaaatcaaacggagactggaattaaaattcccgaagtg
ctgaagtctttcatgcctcctgcgtacgctgaagagatcccgtttactaaaccggcgccg
attgacgaaatggagttgaaaaaacagcagaagaaaaagtaa
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