KEGG   Daphnia magna (water flea): 116921735
Entry
116921735         CDS       T07514                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
dmk  Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dmk03036]
    116921735
   03400 DNA repair and recombination proteins [BR:dmk03400]
    116921735
Chromosome and associated proteins [BR:dmk03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116921735
DNA repair and recombination proteins [BR:dmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116921735
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2 CEP104-like_TOG HEAT_EF3_GNC1
Other DBs
NCBI-GeneID: 116921735
NCBI-ProteinID: XP_032783967
LinkDB
Position
LG4:10945562..10949739
AA seq 962 aa
MVTPTSIQKLRDSLVLQESMSEAISIVSQSIASREITILQLVENLQPELLHQQAAYRCRA
VSTIASILEQLAPDLKEINEKEIDLITEFFCSKLKDHHSILPAALHGLHVLSSTNRLSPG
LARSISQAIFQDVHCQSQLQHDRRAIYKTIKNLLALHIRELQILGQDFVFGLIQAADQER
DPRNLLILFSIFPVVAGYFRLEPFTEEFFEVFSCYFPIDFTPPANDPYGVTKDQLCEGLR
QCLASSAHFAEYCMPLLQEKLESDLVSAKVEALKTLELCCLSYHPTQLEKWIDTFWKCIR
REVLINVNTEELEHASLDALAALSRAFAANEEFKNPAFTKLLKEILSECQGHLCEPERRL
MTPSSYVLLAICSGNAPACALIVSQVIPLLMDQYRIRSQSAPRQFILNCLNKLVQAGLYG
FTEIDVAQSGICPLIPTLLELYLEVLKEDDALLCGLSLQGLGHFVGIGLNHQDLEKVNQS
LLGLLQQPLTTGHTIEEIGRFFYKCAEQNESWFVEQVLVKLLDMAVSDKANVIFLLLRNL
PPLPRIRAQVLSQLLARLEQSGPELRLEMLKTLAYFAQHDEVQMFHQLHSWALKTLKEGD
PPTSLEATCGVLRKLASSLSSEDATQFIDEQIGRYIDQHLASSAWVVPIMEATLGSLDAT
PVGQNLEKLIKTLEPLTICHPNADVRISACRLVAALINKVPEGHELESILDSLRTKWQDP
SADRNKTVCLFVWITKALLMRSYSKLDQSIQELVEFLNDPTHGYLVAEGFKTILGETEGC
LNFDSHANIRLMYRQRFFQEVVPRLLKLYRESPSCNKSACFAAIANQLAFIPEGVLVAHI
TTLIPLLIQCLNIEQPDQLIISTITAFMGLMSDNVNAIEEYISSLVPRLLTLAKDGLTMD
VRRLALRCLSELRKAQTVVLLPLRSEVILRLIPCLDDKKRLVRREAAVARQKWAMLGQAG
CD
NT seq 2889 nt   +upstreamnt  +downstreamnt
atggtgactccaacttccattcaaaagcttagggattcgcttgttttacaagaatctatg
tcagaagctatcagcattgttagtcagtcgattgcgtcaagggaaataacaattctccag
ttagtcgaaaatttgcaaccagaattactacaccagcaagctgcataccgatgcagagct
gtatccactattgcctcaattttggaacagctggcacctgatttgaaagaaataaatgaa
aaagaaatagatcttataacagagtttttttgtagcaagctcaaagatcatcattcaata
ttacctgctgccttacatgggcttcatgtattgagctcgacaaacaggctttccccagga
ttagctagatcaatatctcaggcaatatttcaagatgttcattgccaatcacagttgcag
catgatagaagagcaatatacaaaacaatcaaaaaccttctggctcttcatattagagaa
ttacagattcttggtcaagattttgtttttggccttatccaggctgcggatcaagaaaga
gatcctcgaaacctcttgatcctcttcagcatatttcctgtggttgctggttacttcaga
ctcgaaccgttcaccgaagaattttttgaagtttttagttgctatttcccaattgatttc
acgccgcctgcaaatgacccatacggagtaaccaaagatcagctgtgtgaaggattacga
caatgccttgccagtagcgctcattttgctgaatactgtatgcctttattgcaggagaaa
ttggagtctgacttggtttcagctaaagtagaagcgttgaaaacattggaactgtgttgc
ctctcctatcatccgacgcagcttgagaagtggattgacacattttggaaatgtattcgc
agggaagtcttgatcaatgtcaataccgaagagctagagcacgcctctttggacgctctt
gctgctttatcacgggcattcgcagcaaatgaagaatttaaaaatcctgcatttaccaaa
ctgctcaaagaaattctgtcagaatgccaaggacatttgtgcgagccggaacgtcgattg
atgacccctagtagctacgttctgctagcaatatgctctggaaatgcacctgcttgtgcg
ctaatcgttagccaggtgatacctcttctgatggatcagtatcgaatcagatcacagtca
gctccacgacaatttatcctgaactgtttaaacaagctggtgcaagctggactttacggt
ttcaccgaaatagacgttgctcagagtggcatatgtcctttgataccaacattgttagaa
ctgtatctcgaagtgcttaaagaggatgacgcattgctctgcggtctaagtcttcaagga
ttgggtcactttgttggtatcggattgaaccatcaagacctggaaaaagttaatcagtca
cttttgggtttgcttcagcaacctttgactaccggccataccatcgaagaaattggtcgg
ttcttttataagtgtgctgagcaaaatgaaagctggttcgttgagcaagtattggttaag
ctgttggatatggctgtttcagacaaagccaatgtgatctttcttctcttaagaaattta
cctccgttgccccggatccgcgcgcaagtgctttcgcagctacttgctcggctagaacaa
tcaggaccagaattgcgactggaaatgctaaagactttagcttactttgcgcaacatgac
gaggtacaaatgttccaccagttgcacagttgggcgttaaaaaccttgaaagaaggggat
cctccaacatcgctcgaagccacctgtggtgttctgagaaaattagcttccagtttatcg
tctgaggatgccacccagttcatcgacgaacagatcggtcgatacatcgatcagcacctt
gccagttccgcttgggtagtgccgatcatggaagcgacgttaggatcgttggacgccaca
cctgttgggcaaaatctggagaagctaattaaaacactggagcctttaactatttgtcat
ccaaatgctgatgtgaggatctctgcatgtcggctcgtggctgcgctgattaacaaagtt
cctgaagggcatgagctagaatcaatactcgactcattgcgaacgaaatggcaagatcca
tccgccgaccgaaacaaaactgtttgcctgtttgtctggataactaaagctctgttgatg
agatcctattccaagcttgatcaatccattcaagagttagttgagttcttaaatgacccc
acacatgggtacctggtggccgaaggatttaaaacaatattgggcgaaactgaagggtgt
ctgaacttcgatagtcatgcaaacattaggctaatgtaccgacagcgatttttccaagag
gtggtacctcgtctgttaaaattgtatcgggagtctccatcttgcaataaatccgcttgc
ttcgccgccatcgcaaaccagctggccttcattccggagggtgttttagttgctcacata
accacgcttattcctttactcatccaatgtctgaacattgagcaacccgatcaactcatc
atttcaacaatcacagccttcatgggtctcatgtcagacaatgtcaacgccatcgaggaa
tatatcagcagccttgtccctagattactcacgcttgctaaagatggtctgaccatggat
gtccgccgccttgcacttcgatgtctgtcagagctaaggaaagcccagacggtggttttg
ctcccacttcgatcagaggttatcctacgcctgattccatgccttgatgacaaaaagcgc
ttggtccggcgagaagcagcggtggccaggcaaaaatgggctatgttagggcaagcaggt
tgtgactaa

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