Daphnia magna (water flea): 116921887
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Entry
116921887 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116921887
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
116921887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
116921887
NCBI-ProteinID:
XP_032784137
LinkDB
All DBs
Position
LG4:complement(10802076..10812177)
Genome browser
AA seq
2128 aa
AA seq
DB search
MNGEIPTIPIISLAGIASLSDLLPEMPLPAPLASTQSSRSLLFHPRVAEEAHRLLSTHDD
ALAAQLQHALTTTSYNPQHIILRDQRYENFNHPEISQPQPELLGAILQRNPHVFRQQQQQ
HPQPWNSNQNSVHPHQQQQQAMYNSQQQIGYASPATHVGAYTPSGNSVQGYAPQQSPAPG
LPAQAAMNYVPQGSPYSTQTKLLVAQNNVYPQQPQQGYNSPSWGYEKPVHTPVPAQQQYQ
QQQAQQHYPQQHHPQQPQATHPAMALVEPLPPQHNQPQQIPQQQIQLQSQHQSPQQAAQP
QLPFYNHQEYPNTIASTHSHERNETEKPVFQRQPAVPQQPAHNHQYVESVKPEPIATSST
NSSSKQNHRTSRKHNSGRPSYKEDSDSDSGAVKPVEPIKEEKPIQEETKPKVKVRKEETP
RKRKSTGEVVTGNDEVTPAPKKKFKRLERKITHEEGKLSAEELMETNTFQRFTRLVEHIF
DATEDADLNAPADLDNDTDIPQEAMIPKQQLHDLCAEAAKLKSIGAMSAVPPERLVRLLN
LLEKNIRDGAKISLLGDPDEDEEESKLWTELSSERVLRAVEAALAALHILTAQNMPKRAY
LEEVIERIVQLARFQLQHSIYPAYDPVYRTESKKDVMSSGGSSKKKRAHVREVRDKTVLL
VYHKMVVLVGLMAELLAVQTLTDTAVLHLSTVGVAPFFVENIPELQLSSLRLVTTIFSRY
DKHRRLLLDDILASIARLPSSKRGLRTFRLSADQHIQMLTALVLQLIQCVLSLPEKLGAP
PGTTVQGEDTDSSVLAMDPEVVVATRYDTAVRTAANFLSVFLGKCGVKNNEEVDYRPLFE
NFVQDLLSTVNKPEWPAAELLLSLLGKLLVQNFSNKNVDVLLRVASLEYLGVVAARLRKD
AVSSQHKTDTIDQLLKQVREDEANNSVEEFKSKKHKKKKKSGDKDHEKENLPADKTEILQ
SLLLDYLAVNSQCDPAMLHARHFYVAQWYIDTKSSVTKRAISSDNVPDAGQEERPQNKET
PKKKKKKKKRNHFSSSSSSSSSSSSEDDNDALRKPHPENIGADCNNHNRSMEMIDRRKKL
LLSKINPFPEAAPGTRTQVLTTPLDAESSELITRFLASKRPFSQSFDSYLKHILKVLTEP
AIAVRAKAMKCLTQIVESDPVVLARTDMQLGVHHSFLDQSTAVREAAVDLVGKFVLSRPE
LIDKYYTMLSARILDTGVSVRKRVIKIMKDICTECPDFPKIPEICVKMIRRVNDEEGGIK
KLVMEVFQAMWFSPVRDKPTLDFNALMRKVMNITDVVAACRDTGLDWLEQLLQQMFRPKE
DKDDTAKANVEPSKALLTACQQIVDCLVENILRLEEASLARVSNSAASVDGKSANGGETK
GASQRLVACMTTLYLFAKIRPLLLVPHAMTLQPYLSLRCRTQGDYQIISDVARTLEVVVP
LLEHPSESFLAQLEEDAVKLILQHEKAVVAACLSCLGSVVNHVTRNFKLIRDCFRKYFGP
LTEYKLMHERDPDNPRLVQHRPFFRRALFTVGLLLRHFDFTDEEVRFGLPDSTKQQVMEI
LLYFVCQNCTDMQFFTLQAIGSVCIRHYDFMLGESLKSVYLNRLLEPSVPLRLKVQVLNN
IETYLQEEEIRMIKEDQQWSKTSKKENLKEMGDVTSGMASTVIQLYLKPILDCFIHSSSS
VRQSAFRVTQLILQQGLVHPVQIVPYLVCISTDGERVSHAADKQLQEIEKKYPGFIHMKA
LQGIRLSYQLQSLIESAPKENSPVQSASKSTVETPNKKSGTKCSVASAIQESQGIARGFR
LREGEHPSALNGFLYSLLRGTKQQRRALVLSMLKQFDETSKNPLAQLLYLADNLASFPYQ
VIDEPLFLIHHIDIMVSVTGSNLLQGFRESLLPSAVPTSPEEEEDDEDIASIMQRLPPDT
TPFEEFLTAAQGCLLLLMLKQHLKDQYGLTDAKITQYSPSEGAKIYEKNAPRKVVNIFMP
RPTLHALKENLGITGYVEVSSKQSLVEKYIEFKQLMLKIDPAEEDEEERLASAMRTYQVS
ESPVPTDVPIGVPVFGAAPALATGATIMGAPTTPMKTPRTKSAKTPRSPRAEKSSSSSSK
KKSHKKRKRKIESDESSDDSDCDPDFRA
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgaaatccctacaatcccaatcatcagcctggcaggcattgcaagcctcagc
gacttgctacctgagatgccattgccagcaccactggcttccacacaatccagtcgttca
ttgcttttccatccacgggtcgctgaggaagctcatagactcctgtctactcatgatgat
gccttggcagctcaacttcagcatgcactcaccacaacctcgtataatccccagcacata
attttgagagatcaacgctatgaaaatttcaaccacccagaaatctcacaaccacaacct
gagttgctgggtgcaatcctgcagcgaaatccacatgtctttcgacagcaacaacagcag
cacccacaaccgtggaacagcaatcaaaactctgtgcatcctcatcaacagcagcagcaa
gccatgtataattctcagcagcaaattggttatgcgtcgcctgccactcatgttggggcc
tacacaccaagtggaaattctgttcagggatatgctcctcagcaaagtcctgctccaggg
ttacccgcgcaagccgcaatgaattacgttccacaaggcagtccatattccacgcaaacg
aagcttttggttgcgcaaaacaatgtgtacccccagcagccacagcaaggctacaatagc
cctagctggggatatgaaaaacctgttcatactccagtaccagcccagcagcaataccag
cagcaacaagcccagcaacattatccgcaacagcatcacccacaacaaccgcaagcaaca
caccctgccatggctcttgtagagccgctaccaccacagcataatcagccgcaacagatt
cctcagcagcaaattcaactacaatcgcagcatcaatccccacagcaagctgcccagcct
cagttgccgttttacaaccatcaagagtatccgaatacgatagcttctacgcattcacac
gaacggaatgaaacggaaaaaccagtgttccaacgccaacctgccgtacctcaacaaccc
gcgcataaccaccagtatgtcgagtctgtcaaaccagagcccatcgctacgtcgtccaca
aacagttcgtctaaacaaaaccatcgtacgtcaaggaaacataatagtgggcgaccgtcc
tataaagaagactctgattccgatagcggagctgttaaaccagtggaaccaattaaagag
gaaaagccaattcaagaagagacaaagccaaaagtgaaagtgcgaaaagaagaaacgcct
cgcaaacgaaaatccaccggtgaggtcgtaacaggcaacgatgaagtgacaccagcaccg
aaaaaaaaatttaaacgactggagcgcaagataacccatgaagagggtaaattgagtgcc
gaggaactcatggagaccaatacgtttcagaggtttacgcgcttagtagaacacattttt
gatgccacggaagatgctgatctgaatgccccggccgacttggacaacgatacggatata
ccgcaagaggcaatgattccgaaacagcaacttcacgatttgtgcgctgaagcagcaaag
ctgaagtccattggtgccatgtccgccgttccacccgaaagacttgttcggttactcaac
ttgctcgaaaagaacatacgcgatggagccaaaatttctctgcttggggatccagatgag
gatgaagaggagagcaagttgtggacggaattgtcttctgaacgtgtactccgagctgtt
gaggcggcgctggcagcccttcatattcttacagcgcagaacatgcctaagcgagcatat
ctcgaagaagtcattgagagaatcgttcagttggctaggttccagttgcagcattcaatc
tatccggcatacgatcccgtttaccggacagagtccaaaaaggatgtcatgagttcaggt
ggcagttcaaaaaagaaaagggcacatgtgcgagaagtgcgtgataaaaccgttctattg
gtttatcacaaaatggttgtactagtcggcttgatggctgaattattggcagtccaaacg
ctaaccgatacggcggtactccatctttcaaccgtaggtgtcgcgccgtttttcgtcgag
aatatccccgagttacagttgtcttctctgagacttgtgaccactatctttagccgctat
gataaacatagacggctattgctcgacgacatcctagcttccatcgcacgactgccctct
tccaaacgagggcttcgaactttccgccttagcgctgatcagcacatacagatgctcacc
gccttagtccttcagctcattcagtgtgtcctaagcctcccggagaagttaggagctccc
ccgggaacaaccgttcagggcgaggacacggacagctctgtcttggccatggatccggag
gtagtggtagccacgcggtacgatactgcagtccggacagctgccaattttctgtcggtt
tttctcgggaagtgcggagttaaaaacaacgaggaagtcgattaccgtccactttttgaa
aatttcgtacaagatctcttgagtaccgttaacaagcctgaatggccggctgctgagctg
ttgctatctcttttgggcaagctattggtgcagaacttcagcaacaaaaatgtcgatgtt
ctcttgcgggtggcatcactggagtacctcggcgtagtggcagctcgtcttagaaaagac
gccgtcagttctcaacacaaaacggataccatcgaccaattgttgaagcaggtccgtgaa
gatgaagcaaacaactcagttgaagaattcaagtccaaaaagcataaaaagaagaaaaag
agtggggacaaagatcacgagaaagaaaatctcccagcagacaaaaccgagattcttcag
tcattgttgcttgattatcttgctgtaaactctcaatgtgatcccgctatgcttcacgcg
cgacatttctacgtcgcccagtggtatatagataccaaatccagcgtgacaaaaagagcc
atttcgtctgacaatgtacccgatgctggtcaggaagaacgaccacagaacaaagaaaca
ccaaagaaaaagaaaaagaagaaaaaacgaaatcacttttcatcgtcgtcatcgtcttcc
tcctcttcgtcctctgaggacgacaacgacgctctaagaaagcctcatcctgaaaatatt
ggtgccgattgcaataatcacaatcggtcgatggagatgattgatcgaagaaagaagttg
ctactttctaaaatcaatcctttcccggaagcagcaccgggtacaagaactcaggtctta
accacccctcttgatgctgaaagctccgagcttattactcgttttctggcttccaaaaga
ccgttttctcaaagctttgattcgtatctcaaacacattttaaaggttttgacggaacct
gccatcgctgtgcgagccaaagctatgaaatgcctaacccaaatcgtcgaatcggatcca
gtcgtccttgcccgaacagacatgcaacttggtgttcatcattctttcctggaccaaagt
acagcggtcagagaagcagctgtcgatctagtgggaaagtttgtcctatcgcgcccagag
cttattgataaatattatactatgttgtctgctcgtattttggacacgggagttagtgtc
cgcaaaagagtcattaagattatgaaagatatctgcaccgagtgccctgattttcccaag
attcccgagatatgtgtgaaaatgatcagacgcgtgaacgacgaagaaggcggcataaaa
aaacttgtcatggaggttttccaggccatgtggtttagcccagtcagagataaacctact
cttgatttcaatgctttaatgagaaaggtcatgaatattactgatgtggtagccgcttgc
agagatactggcttagattggcttgaacaacttcttcaacaaatgtttcgaccgaaagag
gacaaagacgataccgcgaaagcaaacgtcgaaccttccaaagctctcttaacggcctgt
cagcagattgttgattgtttagtcgaaaatatccttcgtcttgaagaagcatcccttgct
cgtgtgtccaattctgcagcatcggtggatggtaaaagtgcaaatggcggagaaacgaaa
ggagcctcccagcgattagttgcctgtatgacgacactgtatttgttcgcgaaaatacga
ccccttttgctggtaccgcacgccatgacccttcaaccttacctgagccttcgctgtaga
acacaaggcgactatcaaattatcagcgatgttgcgcgcacgttggaagtagtggttcct
ttgctagaacatccgagtgagtcttttcttgcccagctcgaagaagatgccgtcaagttg
attttgcaacacgaaaaagccgtagtggctgcttgtctttcgtgcctgggttcagttgtc
aatcatgtgacacgaaattttaaactcatccgagattgcttccgaaaatactttgggcca
ctaaccgagtacaagttgatgcacgaaagagatccagataatccacgactcgtccaacat
cggcctttcttccggagggcgcttttcaccgtaggattattgctcagacatttcgatttt
acggacgaagaggtgcgctttggtttacctgactcgaccaaacaacaagtaatggagata
cttctttacttcgtgtgccaaaactgtactgacatgcagttctttactcttcaggccatt
ggctccgtctgcattagacattatgatttcatgttgggggaatctctaaaatcggtttat
cttaaccgattgttggagccatccgttccattgcgactaaaggttcaagtgttaaacaac
atcgaaacctacctccaagaagaggaaattcgaatgatcaaagaagaccaacagtggtct
aagacgtcaaagaaggaaaacctaaaggagatgggagacgtaacctcgggaatggccagc
actgttattcaattgtatctgaagcctatcctggattgcttcatccactcttcatctagt
gttcgacaatcagccttcagagtgacacagttgatcctccagcaaggattggtccatccg
gtgcaaatcgttccgtatttggtttgcattagcactgatggtgaacgtgtatctcatgct
gccgataagcagttgcaagaaattgaaaagaagtacccggggtttattcacatgaaagcg
ttacaaggcatccgactctcttatcagttgcaatcactaatcgaaagcgctcccaaagag
aattcacctgtccaatcagcttcgaagagcacagtggagactccaaacaagaaaagcggt
accaagtgttcagtggctagtgcaattcaggaaagccaaggaattgctcgtggtttccgg
ctcagggaaggggaacatccgtctgccctcaatggcttcctctactctcttctgcgtggt
acaaaacagcagcgacgagctcttgtgctttcaatgctcaaacaattcgacgagacatca
aagaatcctctcgcacagctcctttatctggcagacaatctagcttcctttccctaccag
gtgatcgatgaaccgctgtttttgatccaccatattgacattatggtatcagtgacgggg
tctaacctccttcaaggattcagagaatcccttctccccagtgctgttcctactagtccg
gaggaagaagaagacgacgaggacattgcatccattatgcaacgattacctccagataca
acaccgttcgaggaatttctgactgccgctcaaggttgtctccttcttctcatgcttaag
caacacctaaaagaccagtatggcctgacggatgccaaaataacccagtattccccgtca
gaaggggcgaaaatatacgagaagaatgcaccaagaaaagtggtcaacattttcatgcca
agaccaacattacatgcgttgaaagaaaaccttggtataactggttacgtggaggtgtcc
agtaaacagtcgctggtagagaagtatatagagttcaagcagctcatgctcaaaatcgat
cccgctgaagaagatgaagaagagagactggcctctgccatgcggacgtatcaagtttct
gaatcacctgtcccgactgacgttccaattggagtgcccgttttcggagcagcgccggca
ttagcgacgggtgcaacgataatgggagcgccgacgacaccaatgaaaacgcctcgaaca
aaatcggcgaaaactccaagatcaccaagggcagagaaaagtagtagtagtagcagtaag
aaaaaatcacataagaaacgaaagcgaaaaattgagagcgacgaaagcagtgacgactcg
gattgcgatccggacttcagagcttga
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integrated database retrieval system
