Daphnia magna (water flea): 116921909
Help
Entry
116921909 CDS
T07514
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
dmk
Daphnia magna (water flea)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
WW
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
116921909
NCBI-ProteinID:
XP_045028418
LinkDB
All DBs
Position
LG4:10880093..10898346
Genome browser
AA seq
1683 aa
AA seq
DB search
MRLLRTCCVCQCRRSNSGSSSSSSNAHRKRRRRRTSPGSERESVSGSETGVAEPHRTEAV
DQRANSRRTNGGGSKRRQRATYRYEVVYRREEFSHDYLDRPEVEENGGHVPPVFRPVPEG
QPTDSQALQLQSQVVPFQSADYSLLSNYGRLEEFHPPALHTAVHSWQQQRQPQQHSSHDD
QPLYQNFGGGLTKDLREYLTTRFAKGSVDHELQTTIRDNLYLRTVPVTTRPRRPGETDGL
DYTFLSLEQFRLLEKNGSLLERGIYDGNYYGTPKPSLDSPLVLPSTPLAQSSTSALLQQH
NNNNSLLLLAGAHPSSEGKRRRNRSNVEAMAAAQNDGDADPNSGIDHSSMQQHLNPSQRM
AAGNNAAAPICNNNSIGGSNNNMSIPSYREDGGGAMGGLSEAELGPLPQNWEKAYTERGE
VYFIDHNTGTSQWLDPRLSKIQKKSLEECAEDELPYGWEKIDDPTYGTYYIDHVNRKTQY
ENPVTQAKKGGSGANETGTSSPPAPPATSGLPTTGNASSTDSGNSTYPRLKKQQQQQQSN
ESGGGGGHNGNNQPPAPLPKRSNSESRLNLHGYGGYNRPFFTRNPSELQGERICTTLLKS
NRGLGFTIVGGDDSEEEFLQIKSVVPHGPAWVDGRLQTGDVLVYVMDQCVLGYTHHDMVN
MFQSIAPGQAVALEVCRGYPLPFDPNDPNTEIVTTVAVAQQDGNKGPSRPGSADLLMGSS
SSEHHHHHHHHQDNNDMAHRFDGDEYGDGGVNGNPSAGPNKVEFLTVQITKGAMGFGFTI
ADSAYGQKVKTILDRPRCKNLQEGDILVDINGINMRHMSHGEVVQVLKDCAWGREASITV
QRGGAATPTKNKWKKGGIKEQDQQQQPPVSPRKPPVGAGLFRSKTPTADLYSAQTKEVVP
IRPKTPLVDTRNRPKTPSMGVGMSSGGPAQQSSLPDHLEQHREINRTPVNALAEQFQNGM
NFQENNGYNNQQQQRNVMNRSRSPGRELDSHPSSMQMHYENGLPPDAGYGGMPNGYPPAY
ESDYGRMGQPSRNPRADPYAPNPYTGGSYSMDASRPMDYGYGYSGMNGPNVPDYPEENLG
QFHRQDSGYGTQPQSVVVGYSNNSGNSGNNVLRQNAGGPGSFAPLKEGTSFDHDLPSYPP
SMSTGRPDVAMRRPPNNSGGNGNANPPVNSSGQQSLPPPPPPGEWMEMNVTLLRHETGFG
FRIVGGTEEGSQVSIGHIVPGGAADLDGRLRTGDEILAVDLMSVVHTSHHHVVQLMGAAA
LNGRVSITVRRWIPLHPSSISPQDTGYPSGVGDGSGMIYPYDVTVVRREDEGFGFVIISS
VTKGVSFIGQIIPDSPAKRCSQLHVGDRILAVNHHDISRLHHGDIVNLIKDSGYTVTLTV
GPPLDDTASSNASNSHRSSDAMVTAQALPAPASDGTRSPNRIDAYHQQYVYNQEDQIDGP
MIDGSEAYPPIEEDQLYAVELSRGTRGFGFSIRGGREFHNMPLFVLRIADNGAAAQDGRL
RVGDQLIEINGISTKNMTHADAIELIKNGGMVVRLLLRRGNVAPPMGENGQMLSPSTTGS
PTTPSGMMEMMRPNSSMAQPHHGSYGSNGPLSQNHQTDSRMPNGIPVGHQQPPPPSQQQQ
QYTGPPPYMMGPRGMPNGGMRGNVPAPLNVPPSQRNLNGPLSHSSPRVIGAAGNVAGDYY
WGS
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgcggctactaagaacttgctgcgtttgccaatgtcgtcgtagtaatagtggcagtagc
agcagcagcagcaacgctcaccgcaagcgaagaaggcgaagaacaagtccgggcagcgaa
cgtgagtcggtcagtgggagtgaaactggcgttgcggaaccgcatcgaacggaagccgtc
gatcaacgggccaatagtcgacggacgaatggtggcggcagtaagcgccgccagcgtgcc
acttaccgctacgaggtggtctatcgtcgcgaagagttcagtcacgactatctagaccgt
ccagaagtggaggaaaacggtggccacgtaccgcccgtattccggccggtgccggaagga
cagccgaccgattcgcaagcgcttcagctgcagtctcaagtcgttccgttccagtcggct
gattatagcctgttgagcaattacggacgactggaagagtttcatccgccagctctgcac
acggccgttcatagctggcagcaacaacgtcagccacaacaacattcgtcccacgacgat
caacccctctatcagaatttcggtggtggtttaacgaaggatttacgcgagtacttgacg
actcgcttcgctaaaggctctgtggaccatgaactgcagacgacgattcgagacaatttg
tacctgcgaacagtgcccgtgacgacacggccgaggcggccaggagaaaccgacggactt
gattacacatttctcagtttggaacagtttcgcttgctggagaagaacggctcgctgctc
gaaagaggcatctacgacggaaattattacgggactccgaaaccttcgttggattcaccg
ttggtcttaccgtccactcctttagcacagtcttcgacatcggcgttgctccaacagcac
aacaacaacaactcgttgcttttgctggccggagcacatcccagctcggagggtaaacgt
cgccgaaatcgttcgaatgtggaagcgatggccgcggcacagaacgacggcgatgccgac
ccaaacagtggcatcgatcactcttccatgcagcagcatctgaatccatcgcagaggatg
gccgccggcaataacgctgcagctcccatttgcaataataatagtataggtggcagcaat
aataacatgtcgattccgagttatcgcgaagacggtggcggtgccatgggcggactatcc
gaagccgaattgggtccattgccgcaaaattgggaaaaggcgtacacggaacgaggcgaa
gtttatttcatcgaccataatactggaacgtctcagtggctggacccgagactgtccaaa
atccagaaaaagtcgctggaagaatgcgccgaagatgaattgccctacggatgggagaag
attgacgatccgacgtacgggacgtactacatcgatcacgtcaatcgcaaaacgcagtac
gagaatccggtcacgcaggcgaagaaaggcggcagcggagccaacgagactggaactagc
agtccgccggctccacccgcaacgagcggcctacccaccactggcaatgccagcagcacc
gattccgggaacagtacctacccccgtttgaagaaacaacaacagcaacaacaatcgaac
gagagcggaggaggaggaggacacaatggcaacaaccaaccaccggctccattacccaaa
cgctccaatagtgagtccagattaaatctccacggttacggaggttacaaccgaccgttt
ttcacgagaaatccgtccgaattgcaaggcgaacggatctgtacgacgttgctcaaatct
aaccgcggactgggtttcaccatcgtcggcggtgacgacagcgaagaggaattcctccag
atcaaatctgtcgttccgcacggacccgcctgggtcgacggacgcctacagaccggcgac
gttctggtgtacgtaatggatcagtgcgttctgggctacacccaccacgatatggtgaac
atgttccagtctatagcgccgggccaggccgttgcgttggaagtttgtcgaggatatcct
ctgcccttcgacccgaacgatcccaacactgagattgtgactaccgtggccgttgcccag
caggacggcaataaggggccgtctcgtcccggaagtgccgacctgctcatgggctcctct
tcatccgagcatcaccaccaccaccaccaccatcaggataataacgacatggctcaccgc
tttgacggtgatgagtacggcgatggaggagtcaatggcaatccatcggcaggtcccaac
aaggttgaattcctgactgttcaaataacgaaaggggcgatgggcttcggcttcacgatt
gcagacagcgcctacggccaaaaggtcaagaccatattggacaggccgcgttgcaagaac
ctccaagaaggagacatcctggttgacattaacggcatcaatatgcgacacatgagtcac
ggcgaagttgtccaggtgctgaaagattgcgcttggggtcgcgaagcatccattactgtg
caacgtggcggtgcggcaacgcccactaaaaacaagtggaaaaaggggggaattaaagaa
caggaccaacaacaacagccgcccgtcagtccgcgcaaacctccagtcggtgctggactg
tttcgcagtaaaacgcccaccgcagatctttacagcgcccagacaaaggaagtggtgccc
atcagaccgaaaacgccactggtggacacacgcaaccggcccaaaacgccctctatggga
gtgggtatgagtagcggtggtccagctcagcaatcgtccctgccggatcacctggaacag
caccgcgaaattaaccgaacgccagtcaacgctctggcggagcaattccagaacgggatg
aatttccaggagaataacggttacaataatcagcaacaacaacggaacgtgatgaatcga
agccgaagtccaggcagggaactcgactcgcatccgtcgtcgatgcagatgcactacgag
aacggcctgccaccggacgctggttatggaggcatgcccaacggctatccacctgcctac
gagtcggattacggccggatgggtcaaccgtctcgcaatccgcgtgccgatccctacgct
cccaatccctacaccggtggatcgtattccatggatgcatcccgtccaatggattacggt
tacggctattcaggaatgaatggcccaaatgttccagactatccggaagagaatctaggc
cagtttcatcgccaagattccggctacggcacgcaaccgcagtcggtggttgtcggttac
agcaacaatagcggcaatagtggcaataacgtcctgcgtcagaatgctggtggaccgggc
tcattcgccccgctcaaagaaggcaccagcttcgatcacgatttaccgtcgtatccaccg
agcatgtcgacaggtcggccggacgtggccatgcggaggccaccgaacaatagcggcggc
aatggcaacgccaatccaccagtcaactcatctggccagcaatcgctgccgccgccgccg
ccgcccggcgaatggatggaaatgaacgtgacgctcttaagacacgaaacgggtttcggt
ttccggatcgttggcggcacagaagaaggatcgcaagtctcgatcgggcacattgttcca
ggcggagcagctgatctggacggccggctgaggaccggcgacgaaattttggccgttgat
ttaatgtcggtcgtccacacatctcatcaccacgttgtccagttaatgggcgcggccgct
ctcaatggccgagtctccattacggtcaggcgctggatacccctccatccatcgtccatt
tctcctcaagatactggatatccaagcggagtaggtgacggcagtggcatgatttacccg
tacgacgtgacggtagtgcgtcgcgaagacgaaggtttcggtttcgtcatcatctcgtcg
gtgacaaagggcgtctcgtttatcgggcaaatcattcccgacagcccggccaagcgttgc
agtcagctgcacgtcggtgaccgcattttggctgtcaatcatcacgacatatccaggctt
caccatggcgatattgtcaacctcattaaagattcgggttacaccgttacgctcactgtt
ggtccgcctctcgacgatactgcctccagcaacgcctccaattctcaccggtcctccgat
gccatggtaactgcccaagccttgcccgctcctgctagtgacggtactaggagccccaac
agaattgacgcttatcaccaacagtatgtctacaaccaggaagatcaaatcgatgggccg
atgattgacggatctgaggcctacccgcccatcgaagaggatcaactttacgccgttgaa
ttgagccgaggcacgcgaggatttgggttcagcattcgaggcggaagagaatttcataat
atgccgctcttcgttctccgcatcgccgacaatggcgctgccgctcaagatggccgtcta
agagtgggtgatcagctgattgaaatcaatggcatcagtacgaagaatatgacgcacgcg
gacgctatcgagttgattaaaaacggggggatggtggtccgtcttctactccggcgaggc
aacgttgctcctcccatgggtgaaaacgggcagatgttatcgccttcaaccacgggctcg
ccaacgacgccgtctggcatgatggaaatgatgagacccaacagttccatggcccagcct
catcacggctcttatggcagcaatggaccactttcccaaaatcaccaaacagatagccgc
atgcctaacggcattcccgttggccatcaacagcctccaccgccatctcagcaacagcaa
caatacacgggaccgccgccttacatgatgggtccgcgtgggatgccgaatggcggcatg
cgcggaaacgttcccgctccattgaacgttccgcccagtcagcgcaatttgaacgggcct
ttaagccacagttcgccgcgtgttatcggtgcagctggcaacgtcgctggagattactat
tggggttcttga
DBGET
integrated database retrieval system