Daphnia magna (water flea): 116921976
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Entry
116921976 CDS
T07514
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116921976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116921976
03012 Translation factors [BR:
dmk03012
]
116921976
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116921976
Translation factors [BR:
dmk03012
]
Eukaryotic type
Release factors
116921976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
116921976
NCBI-ProteinID:
XP_032784231
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Position
LG4:complement(4009652..4012288)
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AA seq
436 aa
AA seq
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MEENSADRNVEIWKIKKLIKSLELARGNGTSMISLIIPPKDQIARISKMLADEFGTASNI
KSRVNRLSVLGAITSVQQRLKLYAKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPINT
SLYLCDNKFHTEALTALLADDNKFGFIIMDGNGALFGTLQGNTREVLHKFTVELPKKHGR
GGQSALRFARLRMEKRHNYVRKVAEVATQMFISNDKVTAAGLILAGSADFKTELSQSDMF
DPRLQVKIIKMVDISYGGENGFNQAIELAAESLANVKFIQEKKLIGRYFDEISQDTGKYC
FGVDDTLKALELGAVEILICWENLDIMRYMLKIPGTEATKVLHLTPEQQKDNTHFTDKES
GTEMELIESQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDMQSL
QGDGPLDDQVYDLDDY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaactctgcagataggaatgttgagatctggaagatcaaaaaacttattaaa
agcttggaacttgcaaggggaaatggcacaagcatgatttctctgatcatcccacctaaa
gatcagattgccagaatcagcaagatgttggctgatgaattcggtactgcctccaacatt
aaatctcgagtaaacaggctatctgtcctgggtgccatcacatctgtacagcagagatta
aaactatacgccaaagtcccgcctaacggattggttatatattgtggaaccattgtcaca
gaagaaggtaaagaaaaaaaagtgaacattgattttgagccttttaagcccatcaacaca
tcactgtacttgtgtgacaacaagtttcatacagaagccttgactgcattattagctgat
gacaacaagtttggatttatcatcatggatggtaatggagcgctgtttggaactcttcaa
ggaaacacgagagaagttttacataaatttactgtcgagctacccaagaagcacgggcgt
ggtggtcaatctgctttgcgtttcgcccggttgcgtatggaaaagcggcacaattatgtt
cgtaaagtggccgaagtagcgacccaaatgttcatatccaatgataaggtgacagcagct
ggcctcatcctggcaggaagtgctgacttcaaaacggagctgtctcagtcagacatgttc
gatccgagattgcaagtcaaaatcattaaaatggttgacatttcctacggtggtgagaac
ggcttcaaccaagcaatcgaactcgccgcagaaagtcttgccaatgtgaagtttatccaa
gaaaaaaaacttattggtcgttactttgatgaaatcagccaagacacaggcaaatattgc
ttcggtgtcgacgacacactgaaggcgttagaacttggggctgtggaaattctcatttgt
tgggagaatttggacattatgcgttacatgctcaagattcccggcacggaagcaaccaaa
gttttgcatttaacgccagaacagcagaaagacaacacgcatttcacggacaaagagagt
ggtacggaaatggaattaattgaaagtcaaccgttactggagtggctggcaaacaactac
aagtcttttggtgcgacactcgaaattatcaccgacaaatcccaagaaggttcccagttt
gtccgagggtttggcggtataggaggcattttacgttataaagtggatatgcaaagttta
caaggcgatggcccgctggacgatcaagtctatgatttggacgattattga
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