KEGG   Daphnia magna (water flea): 116922001
Entry
116922001         CDS       T07514                                 
Name
(RefSeq) protein lethal(2)denticleless
  KO
K11790  denticleless
Organism
dmk  Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dmk04121]
    116922001
Ubiquitin system [BR:dmk04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     116922001
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_DCAF12 Beta-prop_WDR75_1st Beta-prop_HPS5 WD_LRWD1 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 NBCH_WD40 MIOS_WD40 Beta-prop_RIG_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 116922001
NCBI-ProteinID: XP_032784267
LinkDB
Position
LG4:4189272..4191656
AA seq 567 aa
MIPQLINREYGLTTGKEEVPVDFLLTKLQCHQADEYPGIYSISNSAPSSDLLYACKFSQS
PGFEHIVAVANEDGKIGFQDTNIVGNARPIHGSQAHENAIFDLCWAPSKWQIVTASGDQT
SILFDIGSSSISPISIFRGHTASIKSVDFSPTNSSLFASGSRDGSIMVWDVRGSFQLKAE
NVIKNAHPIQAVTEVKTSRTKKRTTPSTTSGVSSVTSVLFQNDYTLISAGAADGNIHVWD
LRKNYTVYKGDPLPKISIPYGVFTCRSGIASLSLNPGKTLLYAGAMDDVIYEFNVASYNE
NPVGVYGGHEQHSFYIKSCLSGDGKYLISGSSDDYAYIWKIGAGPRPLLKLDGHSAEVTC
VAWSPSNVPKVITCADDVRHRIWRINTAKETHVTENVNEIRGRAYKYDAQTPIPKSCEEV
LNRLKKKVNNIPSLGCKTPKSILKINQNTRMPNRTPDIPANSPYPSNERLSVNTPRTALS
PLKSINELTPSHSGNSSNFNRAAASRRLEMDEANYSSPTRDLPNYVADGLSPHSRTRSGT
KRKKLDWLTDLSRKTTPNSHTKGRKIK
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgatccctcagctgatcaatcgggaatatggattgacaactggaaaagaagaagtgcca
gttgatttcctgttaacgaagcttcagtgtcatcaggctgatgagtaccctgggatctac
tccatatctaattcggctccaagttcagatttgctatatgcttgtaaattttcacagtca
cctggttttgaacacattgtggcagttgcaaatgaagatggaaagattggatttcaagac
accaatattgttggcaatgcaagacctattcatggttcccaagcacatgaaaatgcaata
tttgatctttgctgggctccatcaaagtggcaaattgtgactgctagtggcgaccaaact
tcaatcctttttgacattggtagtagctcaatcagtccaatttccatctttagaggccat
acagcaagcataaaatcagttgacttttccccaacaaattcatctttgtttgcttctggc
tctcgtgatggttccataatggtctgggatgttaggggaagtttccaacttaaagctgaa
aatgtcataaaaaatgctcatcccattcaagccgttacagaagtgaaaacttcacgtacc
aaaaagaggaccacccccagtactacctctggtgttagcagcgtcacttcagtcttattc
caaaacgattatacccttataagcgcgggagcagcagatggaaatattcacgtttgggac
ctcaggaagaattatactgtgtacaaaggtgatccgttaccgaaaatatccattccttat
ggtgtattcacgtgccgaagtggaatagccagcctttcactaaatccaggaaaaaccctt
ctttatgctggtgcgatggatgacgttatttatgagtttaacgttgcgtcgtataatgaa
aacccagtcggtgtgtatggtgggcatgaacagcactcgttttacatcaaatcatgtttg
agtggcgatggaaagtacttaattagcggatctagtgatgactacgcatacatttggaaa
atcggcgcaggccctcggccactgctcaagctcgacggtcatagtgcggaggtgacatgc
gtcgcgtggtctcccagcaacgttccaaaagtcatcacgtgcgcagatgacgttcggcac
cgaatttggagaattaacacagcaaaagaaactcacgttacagaaaacgtaaatgaaatc
agaggccgtgcctataaatacgatgctcaaacccctattcccaaatcttgtgaagaagtt
ttaaataggctgaaaaagaaggtcaacaatatcccgtctttaggctgcaaaaccccgaaa
tcaatcctaaaaatcaaccaaaatactcgcatgcccaatagaacccccgatattcccgct
aactctccctacccatcaaatgaacgactatcagttaacacaccccgaacggcactgtcg
cctttaaaaagtattaatgaactgactccaagtcacagtggcaatagtagtaattttaac
cgagccgcggcttcccgtcggctagaaatggatgaagcaaattattcgtcccctactaga
gacttacctaactacgtggctgatgggttgtctccgcatagtagaaccaggtctggcaca
aaaaggaaaaagttagattggctcactgatctcagtcggaaaacaactcctaattcgcat
actaaagggcgaaagatcaaataa

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