Daphnia magna (water flea): 116922001
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Entry
116922001 CDS
T07514
Name
(RefSeq) protein lethal(2)denticleless
KO
K11790
denticleless
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116922001
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116922001
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD_LRWD1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
NBCH_WD40
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
116922001
NCBI-ProteinID:
XP_032784267
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Position
LG4:4189272..4191656
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AA seq
567 aa
AA seq
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MIPQLINREYGLTTGKEEVPVDFLLTKLQCHQADEYPGIYSISNSAPSSDLLYACKFSQS
PGFEHIVAVANEDGKIGFQDTNIVGNARPIHGSQAHENAIFDLCWAPSKWQIVTASGDQT
SILFDIGSSSISPISIFRGHTASIKSVDFSPTNSSLFASGSRDGSIMVWDVRGSFQLKAE
NVIKNAHPIQAVTEVKTSRTKKRTTPSTTSGVSSVTSVLFQNDYTLISAGAADGNIHVWD
LRKNYTVYKGDPLPKISIPYGVFTCRSGIASLSLNPGKTLLYAGAMDDVIYEFNVASYNE
NPVGVYGGHEQHSFYIKSCLSGDGKYLISGSSDDYAYIWKIGAGPRPLLKLDGHSAEVTC
VAWSPSNVPKVITCADDVRHRIWRINTAKETHVTENVNEIRGRAYKYDAQTPIPKSCEEV
LNRLKKKVNNIPSLGCKTPKSILKINQNTRMPNRTPDIPANSPYPSNERLSVNTPRTALS
PLKSINELTPSHSGNSSNFNRAAASRRLEMDEANYSSPTRDLPNYVADGLSPHSRTRSGT
KRKKLDWLTDLSRKTTPNSHTKGRKIK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgatccctcagctgatcaatcgggaatatggattgacaactggaaaagaagaagtgcca
gttgatttcctgttaacgaagcttcagtgtcatcaggctgatgagtaccctgggatctac
tccatatctaattcggctccaagttcagatttgctatatgcttgtaaattttcacagtca
cctggttttgaacacattgtggcagttgcaaatgaagatggaaagattggatttcaagac
accaatattgttggcaatgcaagacctattcatggttcccaagcacatgaaaatgcaata
tttgatctttgctgggctccatcaaagtggcaaattgtgactgctagtggcgaccaaact
tcaatcctttttgacattggtagtagctcaatcagtccaatttccatctttagaggccat
acagcaagcataaaatcagttgacttttccccaacaaattcatctttgtttgcttctggc
tctcgtgatggttccataatggtctgggatgttaggggaagtttccaacttaaagctgaa
aatgtcataaaaaatgctcatcccattcaagccgttacagaagtgaaaacttcacgtacc
aaaaagaggaccacccccagtactacctctggtgttagcagcgtcacttcagtcttattc
caaaacgattatacccttataagcgcgggagcagcagatggaaatattcacgtttgggac
ctcaggaagaattatactgtgtacaaaggtgatccgttaccgaaaatatccattccttat
ggtgtattcacgtgccgaagtggaatagccagcctttcactaaatccaggaaaaaccctt
ctttatgctggtgcgatggatgacgttatttatgagtttaacgttgcgtcgtataatgaa
aacccagtcggtgtgtatggtgggcatgaacagcactcgttttacatcaaatcatgtttg
agtggcgatggaaagtacttaattagcggatctagtgatgactacgcatacatttggaaa
atcggcgcaggccctcggccactgctcaagctcgacggtcatagtgcggaggtgacatgc
gtcgcgtggtctcccagcaacgttccaaaagtcatcacgtgcgcagatgacgttcggcac
cgaatttggagaattaacacagcaaaagaaactcacgttacagaaaacgtaaatgaaatc
agaggccgtgcctataaatacgatgctcaaacccctattcccaaatcttgtgaagaagtt
ttaaataggctgaaaaagaaggtcaacaatatcccgtctttaggctgcaaaaccccgaaa
tcaatcctaaaaatcaaccaaaatactcgcatgcccaatagaacccccgatattcccgct
aactctccctacccatcaaatgaacgactatcagttaacacaccccgaacggcactgtcg
cctttaaaaagtattaatgaactgactccaagtcacagtggcaatagtagtaattttaac
cgagccgcggcttcccgtcggctagaaatggatgaagcaaattattcgtcccctactaga
gacttacctaactacgtggctgatgggttgtctccgcatagtagaaccaggtctggcaca
aaaaggaaaaagttagattggctcactgatctcagtcggaaaacaactcctaattcgcat
actaaagggcgaaagatcaaataa
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