Daphnia magna (water flea): 116922019
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Entry
116922019 CDS
T07514
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 32 isoform X1
KO
K11837
ubiquitin carboxyl-terminal hydrolase 6/32 [EC:
3.4.19.12
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmk01002
]
116922019
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116922019
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116922019
Peptidases and inhibitors [BR:
dmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116922019
Ubiquitin system [BR:
dmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116922019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
116922019
NCBI-ProteinID:
XP_045029185
LinkDB
All DBs
Position
LG4:10017322..10025268
Genome browser
AA seq
1598 aa
AA seq
DB search
MSGVAGQASKKVKAIASVTCNLISAMGAKDSKPQVISYEEAAKRVNNVELKRLKDTFGKY
STPNGLLQQSIFLSEIIGDTVPNNLADLIYTAWGGTAKGISFKDLLSGLVLLTRGTQDEK
CRFIFSLYAKDINSVVTKDNVVNYTTKYSDGWNLENISSLFDEAEAVNYSKFREWLITNP
CSTSLTQWLLSDPCPITLSNDLETPTFYQTLSGVTHLDEQEIIDLEKKYWQLKNLSSNGK
FDIELFLSFASAPISSNSEEDVSKFSIARGLFSAFDENCDGHLDFKEIVCGISAACRGPL
VERIKFCFKIFDVDRDGVFSHSEVTQLIESLKQLAIEQFPENSSDADLLEISDLIANEME
SVDLESFLMWAVKRNALEHLLDMLHQLCHVVLGLRPASRTEEGKLIQNWLRREVKRGYRV
GEFWYLISSIWWKQWSDYVAPNQDDSSKNPPSNASLRNNPSDSGSDVGTVVRPRAIDNTC
LVSTSTVKATVLTGEGGRLRRELEKGKDYEVVPEAIWKALSAWYGGSPALPRQAVQFTDS
GPIELELYPLLLRLLRHSSTTNDNGPAWNGQSWNSIVGGYGAAALAGGYGYFPSATQQTP
RRYLAYVAAFSQLATVSQTYEYLCGRLRLKFDDVRLWLMKDDHCLVLLEDENSTLASLSC
RDNDQLLIEVRNKDLTWPEEMVSLSGQSGDKYRQALPSEKGATGLNNLGNTCFMNASLQC
VSNTQALTQYFTSSMHLLELNRDNPLGMKGNIAKDYGDLIRDIWKGKSRTIAPLRLRWTI
GKYAPRFNGYQQHDAQELLAFLLDGLHEDLNRVHDKPYVELSDSEGRPDVVVAQEAWENH
LLRNRSIVVELFHGQLKSKVTCGVCQRESVRFDPFNYLSLPLPLESYVHVEVVVLRLDGS
LPVKYGLRLPMDATYLLLKERLASLCQISPDHLLFAEVSGAMIKTFPGVNSKVRPTSGLA
LFAYQVLSSTEVIQLLPANGGNIGAPDSGAKDANRNNNKIGHHSNNQIAKVVDKGGDTTA
TTTSSEVRRPVGICMNVMSTVFCRKNGTSPGQESLPQRSTAIQQPVTNGGTNDERNGDRS
SLASTSSGSGGLGSPVSLTSNNSSTQELSVSLGMGASFLVVYHRKMIRQDLYFVSPHKTR
PSLFGLPLLVPLAWRTDGVPSSGDERNRMLVLQTTSQDLYRCVWTLVSRLVSPSPPTDSG
TLPNHAHDCDDSLGYEFPFTLKVVQANGIHCGICPWTKFCKGCPLAPTPDPLPNGSETNS
SYIEGVLNYCIAVDWEPTALHLRYQTSLEKVFDEDPSVAKALHQQTEPVSLEQCLQAFTR
EEQLSGDEKYYCPKCATHQPATKKLQIWRLPPILIVHLKRFQFVNHRWIKSHKAVQFPHN
NLDFTEFLAAIPSETLVRHRQIASSSSMPPNGVAESSKDDSNDISTKHSISSSVPYSNGH
PPNIREVITGNESTRKRLESTSLITHPVHDEDLIDFHQHRLLPGYNKLDITYSLYAAVCH
SGIMGGGHYISYAKNPNGKWFYYNDSTCKESSANQIEGQTAYMLFFERDGIDMKAYLPKL
REPSTSSAESANSESTSGKVAVAVSGLEEEEGKKCCIM
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagtagctggacaggctagcaaaaaggtaaaggcgatcgcgagtgtaacttgc
aatttgatcagcgccatgggagctaaggattctaagcctcaagtcatcagctacgaagaa
gccgccaagcgcgtgaacaatgttgaactcaaacgactaaaggatacattcggcaaatat
tcaacaccaaatggattactccagcaaagcatttttctttctgaaattattggtgacaca
gtcccaaacaacttagcagatcttatttacaccgcttggggtggaactgcaaagggtatt
tctttcaaagatcttctgagtggattagttcttctcactaggggcacccaggatgaaaag
tgtagattcatatttagtctatatgcaaaagatatcaacagtgttgtgaccaaagataat
gttgtaaactacacaacaaagtattctgatggatggaatctagaaaacatttctagtttg
tttgatgaggctgaggccgttaattattcaaaatttcgggaatggctgataacaaatcct
tgttctacttctctaacgcagtggttgttgagcgatccatgtcctataacgctctccaac
gatctcgagacgccaacattttatcaaactttgtctggtgtcacccacttggatgaacaa
gagattattgatctcgagaaaaaatattggcagcttaaaaatttatcatcgaatggaaag
tttgatattgaactcttcctttcctttgcttcagcacccatcagttcaaacagcgaagag
gacgtttcgaagttctctatcgcccgcggattattttccgcgtttgacgaaaactgtgat
ggacacctggactttaaggaaattgtgtgtggaatttcagccgcatgccggggaccctta
gtggaaagaataaaattttgcttcaaaatttttgacgttgaccgcgatggagttttcagt
cattcggaagttacgcaattgatcgaaagcctaaaacaactcgctatagaacaatttcct
gagaatagtagtgacgccgatttattggaaatatccgaccttattgctaatgaaatggaa
tctgttgatcttgaatcatttttaatgtgggcggtcaagcgaaacgccttagaacatctt
cttgatatgttgcaccagctgtgtcatgtagtactcggactacgtcctgcttcgcgcaca
gaagaagggaaactgattcagaattggctaagacgtgaagttaaacggggctatcgagtc
ggtgaattttggtacctcatatccagcatttggtggaagcagtggtcagattatgttgct
ccgaaccaggacgactcaagtaaaaatccacctagtaacgcatctcttagaaacaacccg
tcagattctggaagtgatgtgggcactgtagttagaccaagggccattgacaacacatgt
ttggtgtcgacttctacagtaaaggcaactgttttaaccggggaaggaggacgtcttcgg
cgagaattagaaaaaggcaaagattacgaagtagttccggaggcaatctggaaagcattg
tcagcatggtatggaggaagcccagcgttgccgagacaggctgtccaattcacagattcc
ggcccgattgagttagaattatatccgttgttgcttcgtctcctaagacacagttcgacg
accaatgataacggaccagcttggaacggccaatcttggaatagtattgttgggggctat
ggtgctgcagctcttgcaggcggatacggctattttccatctgctactcagcagactccc
cgtcgttatctagcttacgttgcagcttttagtcaattggccacagtcagccagacatac
gagtatctttgcggaagactgcgcctcaaattcgatgatgtccgactttggctcatgaaa
gacgatcattgcttggtcttgttggaagacgaaaattctacgcttgcctcactttcatgc
cgtgacaacgaccaacttcttatagaagtacgtaacaaagatttaacatggccggaagaa
atggtttctctttctggccagagcggtgacaaatatcggcaagctctgcccagcgagaaa
ggtgcgaccggcttgaacaatctaggcaatacatgcttcatgaacgcttccttacaatgc
gtaagtaatacgcaagcccttacccaatatttcacctctagtatgcatcttctggaactc
aacagagataaccctctgggaatgaaaggaaacattgccaaggattatggtgatttgatt
cgcgatatttggaaaggcaaatctcgaactattgccccgcttcgcttaagatggacaatc
ggaaaatacgccccaaggtttaacggttaccagcaacatgatgctcaggagcttttggct
ttccttcttgacggtcttcacgaagatctaaatcgagttcacgataagccttacgttgaa
ttgagtgacagcgaaggccgtccggatgttgttgtagctcaagaggcatgggagaatcac
ctcctacgaaaccgctcgattgttgtggaactcttccacggccaattaaaatcgaaagtc
acctgcggggtgtgccaacgtgaaagcgtacgctttgatccattcaactacttgtcactg
cctctacctctagaaagttacgtccatgtcgaggtcgttgtccttcggttggatggatcg
ttgccagtcaaatatggtcttcgtttacccatggatgctacgtatctcttacttaaagaa
agattagcctccttgtgccaaatctctcccgatcatcttttatttgcagaagtgtctgga
gcaatgatcaagacgtttccgggagtcaacagcaaagttcgaccgacgtctggattagcc
ttattcgcgtaccaggtgctaagctcgactgaagtgatccaacttctaccggcgaatggc
ggcaacatcggtgctccagacagtggagccaaagatgccaatcgaaataacaacaaaata
ggccatcactccaataatcaaatagcaaaagtcgttgacaagggaggggacaccaccgct
accaccaccagctcggaggtaagacgacccgtcggtatctgcatgaacgtgatgagcacc
gtattctgtaggaagaacggtacctctcctggacaagaatccctgccgcaaagatcaaca
gccatccaacagccagtaacaaatggaggaactaatgatgagcgcaacggcgatcgttcg
agtttggctagtaccagcagcggcagtggtggattaggaagtccagttagtttgacgagt
aacaatagcagtactcaagaactaagcgtctctctcggaatgggagcctcttttttggtt
gtctatcaccggaaaatgatacgacaagatctctatttcgtctcgccacacaaaacgcga
cctagtctcttcggtttaccgctattggttcccttagcatggagaacagatggcgtccca
tcttcaggagatgaacgaaacagaatgttagttctacaaacgacgagccaagatttgtat
cggtgtgtgtggacgctggtgtctcggctggtctcgccttcaccccctactgacagtggc
acacttccaaatcacgcccatgactgcgatgatagtctgggctacgagttccctttcacc
ctaaaagttgtacaggccaatggaatccattgtggtatttgtccatggaccaaattctgt
aaaggatgcccgctggctccaacgcctgaccccctaccaaatggtagtgagaccaattca
tcctatatcgaaggcgtccttaattattgcatcgccgttgattgggaaccgactgctctt
catctccgttatcagacgtcgcttgaaaaggtatttgacgaagatcccagtgtagccaaa
gctcttcaccaacaaacagaaccagtcagtctagagcagtgcttgcaagctttcacgcga
gaagagcaactctcaggggatgaaaagtactactgtcctaaatgcgccacccaccagcca
gctaccaaaaagctacaaatctggagattgcccccaatactgatcgttcatctgaaacga
ttccagttcgtcaaccaccgttggattaagtctcacaaggctgttcagtttccacataac
aatttggatttcaccgaattcttagcagcaattcctagcgaaacgctagtccgccatcga
caaatagcttcttcttcttccatgccaccgaacggggtggcagaatcaagcaaggacgat
tcaaatgatatttcaactaaacattccatttcctcgtccgtcccttattccaacgggcat
ccaccaaatattcgggaagtgatcaccggcaacgaatctactcgtaagcgtctcgaatcc
acgtcgcttatcactcatccggtccatgatgaggatcttattgattttcatcaacaccgg
ctcctaccaggctataacaagctagacattacttacagcctttacgctgctgtgtgtcat
tcgggtattatgggaggaggccattacatctcctatgccaagaatcctaacggtaaatgg
ttctactacaatgactctacgtgcaaggaatcctcggctaatcagattgaaggacagact
gcttatatgttgttttttgagcgagacggtattgatatgaaggcatacctccctaaatta
cgtgaacctagtacgagttcggctgaaagcgccaatagtgaatctacatcgggcaaagta
gcagtagcagtcagtggtttagaagaagaagaaggcaaaaagtgctgcatcatgtga
DBGET
integrated database retrieval system
