Daphnia magna (water flea): 116922099
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Entry
116922099 CDS
T07514
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116922099
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116922099
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116922099
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116922099
NCBI-ProteinID:
XP_045028841
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All DBs
Position
LG4:complement(7238611..7251944)
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AA seq
782 aa
AA seq
DB search
MDFVILQVNGVDVSKSSHEEALGVFLSASEPILVQMLRRAPGNSSSSELSPIKPKSTIKE
SAISSSPTCNSQRTCCLHEHEVYGGIRNSVQVQTDWAGVNLPVWSAIDFYHQTEQLAEND
DVIEEEQEMEYEEIKLKRRNSTDKLGLTLCDGLPVSRINYDDTGKQAPAVDTSNFTEKKT
MNKIYVETNDNATECEEDEACVDEDNTESEDKEVYIQAIAEDSLAAADGRLLQGDVLLQI
NGVDVRNRYQAENLFATTGPELTLLVSRPHNQADPLDVLSVAFPYPELDEEFLEDGESEE
DVQVEGDEERILEDEENEKGDDKTRETENQQLQALYLQERHSHEVEWRQDSGFGTSSLPR
SSSDQDPNEGSFERTARSRMSDGSTPSQTTEEIQTGPYTSTVPCTNQINSDMTADKRLNM
VNRKMESLELECLTAATRYSRRTTQHQTRKQENEKDDSDHIYETISECLDQEPVYSTPYE
LPPETVNGKPVTSHSFSSRACRGVAEKSGMKDNIPLSGPTLVKSNVQSLYRNHCKRGMPR
SDRVEKTNDVEQWIRQAAAVSPLQQLYAQQNGSGESKKMADWRGTTSTKLSSSSGDSSGR
KEKKLSNVTQKRIANEDEMRKSTVRNRHKSNHASVGEDRDTSSAYNTGTGESWQSAHLSP
PFQQLPPGRSSAQYEQCLCCQKKPNAEWMQSSLSLSIIVSGDQLDPVSGSLIPTNQIADC
GHQAQISTRLLGHAQLYPVKAVSGAPLTARGSHRELKGKLLNLVTLGKVGLLIEPKRMAI
IA
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgttattttacaagtcaatggcgtggacgtgtccaagtcgtcgcatgaagaa
gcccttggcgtatttctatcggcgtcagaaccaatattagtgcagatgcttcgacgtgct
cctggtaattcttcgtcgtcggaattatctccaattaagccgaaatctaccataaaagaa
agcgccatttcatcttctccgacatgcaacagccaacggacttgctgccttcatgaacac
gaagtttacggtgggatcagaaatagcgttcaagttcaaaccgactgggcaggagtgaat
ctacccgtctggagcgctattgatttctatcaccaaaccgaacaactcgccgaaaatgat
gacgtaattgaagaagaacaagaaatggaatacgaggaaatcaagctgaaacggaggaat
tctacggataaattgggtctaacattatgcgatggtctgccagtatcacgaataaattac
gatgatactggtaaacaggcgccagcggtggacacgagcaatttcaccgagaagaaaaca
atgaacaagatctatgttgaaacaaacgacaacgctacggaatgtgaagaggatgaagct
tgcgtcgatgaagacaacacggaaagcgaagataaagaagtctatatccaagcaatcgcc
gaagatagtcttgcggcagccgacggaagacttcttcaaggcgatgtccttttgcagata
aatggtgtagatgttcgaaatcgatatcaagccgagaacttgtttgctaccaccggacct
gaactgacgttgctcgtatctcggccacataatcaagctgatcccttggatgtgctgtct
gtagctttcccttatcctgagcttgatgaagaattcctagaagatggagaatcagaagaa
gacgttcaagtcgagggcgacgaagagagaatattggaagacgaagaaaatgagaaaggc
gatgataaaacgagggaaactgaaaatcaacaacttcaagctttgtacctgcaggaaagg
catagccatgaagttgaatggcgtcaggacagtggctttggcactagctctctgccgcgt
agttctagcgatcaggatccgaatgagggatcttttgaaagaaccgctagatcacggatg
agtgatggatcgacaccgagtcagacaaccgaagaaatacaaacaggcccgtacacgtcg
acagtaccatgtaccaatcagataaacagcgatatgacagctgataaaagactgaacatg
gtcaatagaaaaatggaatcgttggaactagaatgcctgactgccgccactcgttattcc
agacgaacgacccaacaccagacaagaaaacaggaaaatgaaaaagatgattcagatcac
atttatgaaacaatctcggaatgtttggatcaggaaccggtttattcgactccctacgaa
ctacccccggagacagtcaacggcaagccagtcacgagccattctttcagctctcgtgct
tgtcgtggcgtagccgaaaagtcaggaatgaaagataatattccgctttcgggacctacc
ctagtcaagagcaacgtccaatctttgtacagaaatcattgcaaacgtgggatgccacgg
tccgatcgagttgagaagacaaacgatgtcgagcagtggatccgccaagcagccgccgta
tctccgttgcaacaactctatgcccaacagaacggttcaggtgaatcgaaaaagatggcc
gactggaggggcacaacttctactaaattgagttccagcagtggcgattcgagcggacgg
aaagaaaagaaacttagcaacgtcacccagaaaagaattgctaacgaagacgagatgaga
aaatcgaccgttcgcaatcgtcacaaatcgaatcatgcaagcgtgggcgaggatcgggat
acttccagtgcctataacactggaactggggaatcgtggcaaagtgctcacttgtcgccg
cctttccagcagttgccacctggacgaagttctgcgcaatacgagcagtgtctttgttgc
caaaagaaacctaacgcagaatggatgcaatcgtcgctctctctttctatcatcgtgtcc
ggtgaccagcttgatcctgtctctggctctctgattcccaccaatcaaatagctgactgt
ggccaccaagcacaaatttcgacccgtctgttagggcatgcacaactttatcctgtgaaa
gctgtcagcggtgcccccttgaccgcacgagggagccacagagaactaaaaggcaaactg
ctcaacttggtgacgttgggaaaagtaggattgttaatcgaaccaaagagaatggcaata
atcgcctag
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