Daphnia magna (water flea): 116922315
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Entry
116922315 CDS
T07514
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116922315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116922315
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116922315
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
RE_Bsp6I
LAMTOR
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
116922315
NCBI-ProteinID:
XP_032784590
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Position
LG5:979011..982140
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AA seq
480 aa
AA seq
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MSFNLSSNQPSQPSTFGAQTFGAQSFGNPAPSSSSFSFGTVPATSSAAPFSFGTSTAPQQ
AGGFQLGATNTSSAGSFGFGSTPQATQAFSFSSVPSNTATATTSGTGATFGFGGFNATGF
GLGSVSSAPLSGLSTNVISTTTTAPSLGLGGINSTPFGGDPAASNSQGKSDSKAFNEMPV
PAEITQSVEEFKKHVKQQKAKKDEVSRGSSKAPEKVGEEVETLKNILSNLANNIQQHSAL
VHKLKHDVALEIKNAEIAQRTKETAPSMQLDNTSPLEYFVRLVADFEQRMQFYKQQIEDT
ERNLLAMSKQQALTPQELMGTMKKLHEAFVLLAGRVHMIHTTLQNYKDDYLTYRRRVLND
PTDIFASKSHVSSKSSLVSQLNKIGSGPSPFGGTSDPLSRTLNHLSSSVQSSGGTSGGLS
FGSSLANSSSVLPSSSAGSLTFGTPSRSAGFFGSSAQSLQSANSSFQLQSPPPGNKRNKR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaatttgtcttctaatcaaccctcacaaccttccacttttggagcacagacg
tttggtgcacagtcgtttggcaatcctgcaccatcaagttcctcgttctcttttggtact
gtcccagcaactagcagcgctgcaccgttttcgtttggaacctctactgctcctcagcaa
gccggaggtttccaattaggagcaaccaatacatcttcagcgggtagttttggctttgga
tcaacaccacaagctacacaagctttcagtttttcaagtgttccttcaaacactgcaact
gccacaacatcagggacaggagctacctttggatttggaggatttaatgcaacagggttt
ggattgggctcagtatcaagtgcacctttatctgggctttctaccaatgtcatatcaact
acaacaacagcaccttctcttggccttgggggtattaattccacaccatttggaggtgat
cctgctgcatcaaactcacaaggaaaatctgattccaaagcttttaacgaaatgccagtt
cctgctgagataactcaatcagtagaagagttcaaaaagcatgtgaaacaacaaaaagct
aaaaaagatgaggtcagtcgaggaagtagcaaagccccagaaaaggttggcgaagaagtt
gagacgttgaagaatatcctgtccaatttggccaataacattcagcagcattctgccctg
gttcacaaactgaagcatgatgtagcactcgaaataaaaaatgcggaaattgcacagcgc
accaaagaaacagcgccaagtatgcaactggataacacctcgcccctagaatactttgtg
cgcttagtggccgatttcgaacagcggatgcagttttacaagcaacaaatcgaggataca
gaaagaaatctattggccatgagcaagcaacaagcgttaacacctcaagaattgatggga
acgatgaaaaagctgcacgaagctttcgttttgttggctggacgtgtccatatgattcat
actacgcttcaaaactacaaagacgattatttgacatacagacggcgagttttgaatgat
ccaactgatatttttgcatcaaagagccatgtctcttccaaatcgtcactggttagccaa
ttaaacaaaattggaagtgggccgtctccatttggaggcacttcagatccgctatctcga
acgttgaatcatctctccagctctgttcaaagttctggtggtactagtggaggtctgagc
tttggctcctcgttagctaatagtagttctgttctgccgagtagtagcgcaggtagtcta
accttcgggacgccaagtcggtcggcaggtttttttggtagctctgcgcagtcgttgcag
tcagccaattccagcttccagttgcaaagcccgccccctggcaataaaaggaacaagcgc
taa
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