Daphnia magna (water flea): 116922365
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Entry
116922365 CDS
T07514
Name
(RefSeq) synaptobrevin-1 isoform X1
KO
K13504
vesicle-associated membrane protein 2
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116922365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116922365
Membrane trafficking [BR:
dmk04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
116922365
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
116922365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
MCU
ODV-E18
DUF2970
SpoIIM
MBDa
CD34_antigen
DUF5345
Motif
Other DBs
NCBI-GeneID:
116922365
NCBI-ProteinID:
XP_032784657
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All DBs
Position
LG5:complement(3003725..3006340)
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AA seq
133 aa
AA seq
DB search
MSAAPGSEVGPDGQPPVVGGNRNPQQMAAQKRLQQTQAQVDEVVGIMRVNVEKVLERDQK
LSELDDRADALQQGASQFEQQAGKLKRKFWWKNLKMMIVMGVIGLIILIIIIVWATSGSS
SSSSITEPTTNSP
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgcacctggatcagaagttggacctgatggtcagcctccagttgttggagga
aatagaaacccgcaacagatggctgcccaaaaaagattgcagcaaacccaagcccaagtg
gatgaggttgttggaattatgcgagtcaatgttgagaaagtattggagagagatcaaaaa
ctttcagaacttgatgatagagcagatgctttgcaacaaggagcttcacagtttgaacag
caagctggaaaattgaaaaggaaattctggtggaaaaatttgaagatgatgattgtgatg
ggcgtcattgggctgataatcctcatcattataatagtatgggctacttcaggttctagt
agtagcagcagcatcacagagccgacgacaaactcaccttaa
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