KEGG   Daphnia magna (water flea): 116922365
Entry
116922365         CDS       T07514                                 
Name
(RefSeq) synaptobrevin-1 isoform X1
  KO
K13504  vesicle-associated membrane protein 2
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    116922365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dmk04131]
    116922365
Membrane trafficking [BR:dmk04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    116922365
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab associated proteins
    116922365
SSDB
Motif
Pfam: Synaptobrevin MCU ODV-E18 DUF2970 SpoIIM MBDa CD34_antigen DUF5345
Other DBs
NCBI-GeneID: 116922365
NCBI-ProteinID: XP_032784657
LinkDB
Position
LG5:complement(3003725..3006340)
AA seq 133 aa
MSAAPGSEVGPDGQPPVVGGNRNPQQMAAQKRLQQTQAQVDEVVGIMRVNVEKVLERDQK
LSELDDRADALQQGASQFEQQAGKLKRKFWWKNLKMMIVMGVIGLIILIIIIVWATSGSS
SSSSITEPTTNSP
NT seq 402 nt   +upstreamnt  +downstreamnt
atgtctgccgcacctggatcagaagttggacctgatggtcagcctccagttgttggagga
aatagaaacccgcaacagatggctgcccaaaaaagattgcagcaaacccaagcccaagtg
gatgaggttgttggaattatgcgagtcaatgttgagaaagtattggagagagatcaaaaa
ctttcagaacttgatgatagagcagatgctttgcaacaaggagcttcacagtttgaacag
caagctggaaaattgaaaaggaaattctggtggaaaaatttgaagatgatgattgtgatg
ggcgtcattgggctgataatcctcatcattataatagtatgggctacttcaggttctagt
agtagcagcagcatcacagagccgacgacaaactcaccttaa

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