Daphnia magna (water flea): 116922521
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Entry
116922521 CDS
T07514
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X3
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116922521
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116922521
Transporters [BR:
dmk02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
116922521
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Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
OATP
Motif
Other DBs
NCBI-GeneID:
116922521
NCBI-ProteinID:
XP_032784774
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Position
LG5:complement(11796055..11802216)
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AA seq
536 aa
AA seq
DB search
MNLFLQCNHVLVSPGKRIMIKFFTDEGGPRRSTRADYETAIAATEYGKFHYWLLLACGWA
NAADAVEILCVSFLLPSAECDLLLTSTDKGILSAIVFLGMMIGGYLWGGLGDSLGRRGVL
MVSMTVNAIFGMLSSLAMTFPTFLVLRFLSGLGIGGSIPVTWSYYAEFQPKAKRGAMLSF
LAAFWMVGNLVVAGLAWAIIPLTFEYESANFQFNSWRLFTLLCGIPSLSVAITLIFFPES
PRYLLSQGDEEGALEVFRRIYASNTGRPVSQYPFTNLELDDDMLSTVSHHSEKLFRRIKR
ICHRVGSQSKLAFGPAVRRSMILMIIINFAIQFGYYGLWLWFPELFNRLQVYYEDHNVTV
SVCEVVDFKPNTTGQDPFEHCKDAAPPDNQVFINAFIVAIAPLPANIWTIFHMDKLGRKF
FLVFSMIGSGLAAFLIWLVRSSAGNLALSCIFGAVSTMGFNALDCLGAELFPTNVRSTAM
SITLAAARLGAILGNIIFGVFVDVACAIPILLVATLLMFGGLLGLWLPNTTKEPLL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttttcttcaatgcaaccatgtgctagtttcaccagggaaaagaataatgatt
aaattcttcactgatgaaggtggtcccagaagatcaacgagagcagactatgaaacagct
attgcagctacagaatatggaaaatttcattattggttgctcctagcatgtggttgggct
aatgcagctgatgctgttgaaattctatgtgtttctttccttttaccgtcggcagaatgt
gatctcttattaacctccactgacaaaggaattctctctgccattgttttcctaggaatg
atgattggtggctacctgtggggaggtttgggtgattccttaggaagacgtggtgttttg
atggtatcaatgaccgtcaacgcaattttcggcatgttgtctagcctggccatgacattt
ccgacatttttggttttgcgatttttgtcaggtctcggaattggtgggagtattcctgta
acttggtcctattatgccgagtttcaacccaaagcaaaaagaggtgccatgctttcgttt
ttggctgcgttctggatggttgggaacttggtagttgcaggacttgcttgggctattata
ccgcttacatttgagtacgaatcagccaatttccagttcaactcatggaggctatttact
ctactttgtggtattccaagcttatcagtcgcaattaccctcatattctttcctgaatcg
cctcgatatttgctgtcgcaaggggacgaagagggggcactagaagtgttccgtcgtatt
tatgcctcaaataccggtaggccagttagtcaatacccgtttacaaacctggagcttgac
gatgatatgttgtcaaccgtttctcatcatagcgaaaaattattcagaagaattaaaagg
atatgtcatcgagtggggtcgcaatcaaagttggcttttggtcctgctgtacgaagatca
atgattttaatgattattatcaacttcgccatccaattcggttattacgggttatggctt
tggttcccggaactcttcaatcgattgcaagtctattacgaagatcacaatgttacagtt
tccgtttgcgaagtcgtggattttaaaccgaataccactggacaagacccattcgaacat
tgtaaagacgctgcaccacccgataaccaggttttcatcaacgcatttatcgtagcgatt
gctcctttaccagctaatatttggacgatatttcacatggataagcttgggagaaaattc
tttcttgtgttcagcatgattggatctggtctggcagccttccttatttggctagttcgt
agcagtgccggcaatttggcgttatcttgtatctttggagctgtgtctactatgggtttc
aacgcattggactgtctgggagcggaattatttcctacaaacgttcgctccacggcaatg
tccataacattggcagccgctcggcttggagcaatattaggcaatattatttttggggtt
ttcgttgatgttgcttgcgccattccaattcttctagtcgcgacactcttaatgtttggt
ggtctactaggactttggcttccgaacactaccaaagaaccattattataa
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