Daphnia magna (water flea): 116922570
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Entry
116922570 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 6-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116922570
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
116922570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
IFT57
SMC_hinge
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
116922570
NCBI-ProteinID:
XP_045035265
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Position
LG9:8799668..8809491
Genome browser
AA seq
1087 aa
AA seq
DB search
MKRVQSSQNSVPEDENSTVESPRRMAKSLKTAGIVTKISLENFLCHDKLEVKFNEQINFI
IGKNGSGKSAVLTGIVVALGERASATCRGMSIKDFVKTGKSKAVVSVTLLNKGQGSYKRD
IFGDTITIERTINASTGSGGYKMINHLGKTISTKRCDLDRILAKMNLQVDNPVCILNQET
AKNFLHSNDANQKYKLFERATQMDVMRDEFSMAENELSRSKFCMKEKLQSLEMLRVDLKK
WHTKKEWYEAINEIHDKKAKLENEILWAQVEDLEREVSGALXKKENQLAEIHRTGEKMQE
QEEQLAKLKEYLRTRKEDAFEKKRELQIARTECAEVEKQSQEMISRQREFQCELRQLAVD
KQRLTNDKQALIKEIDKLKKAHGDSEYAKKKXRRENELLKLKEREETLNSSRKVSEHLVE
QLKGALIQLKSEALASRNELSRIQKSLDTNIKMLAELKKSDSNAYAVFGEWIPKLLQKIE
RTSFRGAKPRGPIGAYIKLRDKSWAPVVETFLGHRLSCFICSNDEDAKLLNRLIDEETPR
NRPKPNIITSSTSGRLHDVSNYKVRCSPELRSKDIHCLMDMLIIDDPDIANILIDLNGIE
QVLLICEDRDARYLLADINRVPPNCKSAITKGGNTYHPDPNYRSYCGKVKSSAQLLQTSV
EDAIRNADEEISNLHREQDRIRQNLSNSSMQIQNNEGQLKQEEAKLASTRREITLIRDKT
RVLENDNDVAEPTDVLALEEDLVDVQAKLDRIDGDLESKTANLEELKRELHKVRQTITQH
QTIISSLMAECGPLQDVFRDNESKQRNIKEKAEMFAASLKSMQSKFNDFESDYEAAKSKA
ELEAENAAQVCARVPVTKSLKNLNSELRQLKEQIAAQEKEYGSREYVLNEYRRRKVDYER
ACSEITCSQGSLKKMNQMSKQRKEFISRFRKSIESRTHHVFQSLLKTRNFEGEIRFDPIE
KTLTLIVTPPGREESLQPTPKRGRGNDATDIRSLSGGERSFATVCFILSLWDAIESPFRI
LDEFDVFMDHVNRSISMDLLITEARENSGRQFIFLTPLGLEKQQLTNMDGLSIFKMADPN
RREEEAI
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcagagtagtcaaaattctgttcctgaagatgaaaatagtactgttgaa
agccccaggagaatggccaaatctttaaaaactgctgggattgtgacaaaaatatcatta
gaaaacttcctctgtcatgataaattagaagtaaaattcaatgaacaaatcaatttcatt
attgggaaaaatggcagtggaaaaagtgctgttcttacaggaatagttgtagcccttgga
gaaagggcctcagccacatgtcgaggcatgagtatcaaagattttgtgaaaactggaaaa
tctaaagctgtagtatcagtaacccttttgaacaagggccaaggatcctataagcgagac
atttttggagacacaatcacaattgaaaggacaataaatgcttccacaggatctggggga
tataaaatgatcaatcacctaggtaaaacgataagtaccaaacgttgtgatctggatcga
atcctggctaaaatgaaccttcaggtggacaatcctgtctgtattttaaaccaagaaact
gcaaagaatttcctgcatagcaatgatgctaaccagaaatataaactgttcgaacgtgcg
acccagatggatgtaatgcgtgatgaattttcaatggcagagaatgagttatccagaagt
aaattttgcatgaaagaaaagcttcagagcttagaaatgttgcgagtcgatttaaaaaaa
tggcatactaagaaagagtggtacgaggcaattaatgaaattcatgataagaaggcgaaa
ttagaaaacgaaatattatgggcacaagttgaagatctagagagagaggtctctggtgcg
ctgnaaaagaaggagaaccagttggcagaaatccacaggacaggggagaaaatgcaggag
caagaagaacagctagccaagttgaaagaatatcttcgaacacggaaagaagacgccttc
gaaaagaaaagagagctgcaaatcgctcgaaccgaatgcgccgaagttgaaaaacaatcg
caggaaatgattagccgccaaagagagtttcagtgtgaactccgtcagctggccgttgat
aaacaacgacttacaaacgataagcaagcgctaatcaaggaaattgacaaattaaaaaaa
gcacacggagacagcgaatatgctaaaaaaaagnagagacgagagaatgagttgctaaaa
ttaaaagaaagagaagaaactttgaattcgtcgcggaaagtttctgaacatttggtcgaa
cagctcaaaggcgcgttgatccaactgaaaagtgaggcattagcttcccgaaatgaactt
tcacgcattcaaaaaagtttggatacgaacattaaaatgctggcggagctaaaaaaatct
gattcaaatgcatatgctgtgtttggcgaatggatccctaaattgctccaaaaaattgag
agaacttcgttcaggggagctaagcctagaggtccaatcggtgcttacataaaacttcga
gataaatcatgggcgcccgtggttgagacgtttttgggacacagactttcatgctttatt
tgctctaatgatgaagatgcaaaattactcaacagactgattgacgaagagactccgcga
aatagaccgaaaccaaacattataacatcttccactagtggtcggttgcatgacgttagc
aattacaaagttcgatgcagtccggaattacgaagcaaagacatccattgcttaatggac
atgttaattattgatgatccagacattgctaacatactcatcgacttgaacggtattgag
caagttcttctcatttgtgaagatcgagatgcgcgctatttgttggccgatatcaatcga
gtacccccgaattgtaaaagtgccattacgaaaggaggtaatacttatcatcctgaccca
aattatcgttcttattgcggcaaggtaaagagttctgcacaattattacagacttcagtg
gaagacgccattcgaaatgctgatgaagaaattagcaacttacatcgcgaacaagacaga
attcgtcaaaacctaagtaactccagcatgcaaattcagaacaacgaagggcaattaaaa
caggaagaggctaaactcgcctcaacacgaagagagataacgttaatccgtgataaaaca
cgggtactggagaacgacaacgacgtcgcggagccgaccgatgtccttgctctggaagag
gatttagtcgatgtccaagctaagttagacagaattgacggtgacttggaaagtaagact
gctaacctcgaggaactgaagcgcgaattgcataaagtgcgccagacaattacacagcac
cagactatcatttcctcgctgatggccgaatgtggaccgttgcaggacgtatttagagac
aacgaaagtaagcaaagaaacatcaaggaaaaagccgaaatgtttgcggcttcattaaag
agcatgcaatccaagtttaatgattttgaatcggattacgaagccgctaagtcaaaagcg
gaacttgaagcagaaaacgccgcacaggtttgcgctcgtgttccagttacgaagtcgttg
aagaaccttaattctgaattgcgacaactgaaagaacaaatagcagcacaagaaaaggaa
tatggatctcgagaatatgttttgaatgagtatcgacggcggaaagtagactacgaacgg
gcatgctcagagatcacatgttcacagggctcattaaagaaaatgaatcaaatgagcaag
caacgcaaggagtttatctccagattccggaaaagcattgaatctaggacacaccatgtt
tttcaatctcttttgaaaactcgtaattttgaaggtgaaatccgttttgatcccattgag
aagacattaacgttaattgttactccacctgggcgtgaggagtcattgcaacctactcca
aaacgtggtcgtggtaacgatgccactgatattcgttccttaagcggcggagagcgatcg
ttcgccacggtctgtttcatcttatcattgtgggatgccatcgaaagcccattcagaatc
ctcgatgagtttgacgttttcatggatcatgttaaccgttccatcagtatggatttgttg
ataaccgaagccagagaaaattcgggtcgccaattcatttttctcacaccactcggtttg
gagaaacaacagctcaccaatatggatggcctatccattttcaagatggcggatcctaat
cgtcgcgaggaagaggcaatttaa
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integrated database retrieval system
