Daphnia magna (water flea): 116922732
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Entry
116922732 CDS
T07514
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116922732
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116922732
Meiosis-specific proteins
Cohesin complex and associated proteins
116922732
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116922732
NCBI-ProteinID:
XP_032785008
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Position
LG5:12024230..12029503
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AA seq
1252 aa
AA seq
DB search
MAKVRSNLKYIEVENFKSYQGFQRIGPLKNFSAVIGPNGSGKSNFMDAVSFVMGEKTQTL
RVKRLSDLIHGASINKPVSRSAMVSAIFEVEDGTELKFTRIVQGSSSEHRFNGEMVNPQR
YFTELEKLGINVKAKNFLVFQGAVENIAMKNPKERTALFEEISGSGALKEDYDRLKAEML
KAEEDTQFTLQKKKGIAAERKEARMEKEEAEKYQKLREDLAEQQVVLYLFKLYHCEQDIK
TCREDIAKKQQELGKIERRKEKADEILKEKKKEHTKIGRELAKMEQDIREIESEINKKRP
TFIKAKERVTHMQKKLEAAQKSLTQARKANDAHAEDIEQLEKELSEVDRRREEYEAELQS
ESQSQGRSVHLEEEQVAQYHRLKEEAGRQSARYLQELDSVNREQKSDQDRLDNESRVRSE
IENQLRQRQHELEETQKRSDKLMEHIRTTETALEEQMKLQGDLTNEVEQSKNQIDTLQSK
LDGISKNLGEAKVDKHEDARRRKKQEIVENFKRLYRGVYDRIINMCHPVHQRFNIPVTKL
LGKYMEAIVVDTEETARNCIQYLKEQMLEPETFLPLNYLKAKPLKERLRVIRDPPNVRLL
YDVLQYDPPEIKKAVLFVTNNALVCDTQEDAMKVAYEMEDGDRYDAVALDGTFYQKSGLI
SGGSRDLEKKAARWNDKQLSALKSNKEKLSEELREAMKKSRKESELHTVNCTVKGLDSRL
RYALSDREKTAKQIEQSQGEIVKLEVQLRNFAPATDEIEKIMRERDLLIQNVKERMNRVE
DTVFAEFCAQIGVANIRQYEERELRLHTWTQQERAKKRLEFENQKNRILNQLEFERSRDT
QTNVERWERSVSDDEEELERAKQAEQKQMSEIDKEMRKLDDIKSTRMSKKNDLDNMEEDM
ALARRDMGTVAKDLQNVQKSITSMEAKIDQKRGERHSILKQSKMEDIIIPMSRGNMEDIE
QDGNITESMNSESVTTSGNDSLNTVANSQTIYEREDRIVIDYSDLPDKYKDLFESDEVRR
EGDRLQRHVNELNNTIQRIQAPNMRAMQKLDLAREKLHETNEEFEKARVKTKKAKQAFER
VKKERFDLFMSCFEHVSNEIDGIYKSLAKNQSAQAFLGPENPEEPYLDGINYNCVAPGKR
FQPMSNLSGGEKTVAALALLFAIHSYQPAPFFVLDEIDAALDNTNISKVAGFIRTQTANL
QTIVISLKEEFYSHADALIGVCPDPGECLISKMLLLDLTQYPPHQFEETQRL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagtaagatcaaatcttaagtacattgaagtcgaaaatttcaaatcgtaccaa
gggtttcaacgtattggcccccttaagaacttttcggctgtaattggcccaaatggatca
ggaaaatctaatttcatggatgctgttagctttgtaatgggagaaaaaactcaaacactc
agagtaaaacggctcagtgatctcattcatggagcatctataaacaaaccagtgtctcgg
tctgcaatggtttcggccatatttgaagtggaagatggaacagaactcaaatttactagg
attgtccaaggttcttcatctgaacacaggtttaatggagagatggtaaatccccaacga
tacttcactgagttggagaaattaggcatcaatgtaaaggcaaagaatttcttggtgttt
caaggagctgttgaaaatattgcaatgaaaaatcctaaagaaagaacagcattatttgaa
gaaatatcaggctctggggctttgaaggaagattatgataggttaaaagcagaaatgtta
aaagctgaagaagacactcaatttacactgcaaaaaaagaaaggtattgctgctgagagg
aaagaagctagaatggagaaagaggaagctgagaagtaccaaaagcttcgtgaagaccta
gcagaacagcaagttgtgctgtacttgttcaagctgtatcattgtgaacaagatatcaaa
acttgcagggaagacattgccaagaaacaacaagaacttgggaagattgagaggcgcaaa
gaaaaagccgatgaaatcttaaaagagaagaaaaaggaacacactaaaatcggaagagaa
cttgctaagatggaacaagacatacgcgaaattgaatctgaaattaataaaaaacgccca
acctttatcaaagccaaagaacgagtgacgcacatgcagaaaaagttagaagcggcccaa
aaatcgcttactcaagcgagaaaagccaatgatgcccatgcagaggatattgagcaactt
gaaaaagagttgtcggaagtggacaggcgaagagaagaatatgaggctgaattgcaatcg
gagagccaaagtcagggtcgcagcgttcacttggaggaagaacaagttgctcagtaccat
cgtttgaaggaagaggcgggaagacaatcggcgcgttacctgcaagaacttgattcggtg
aatcgcgaacaaaagtctgatcaagatcgcttggacaatgagtctcgtgtccgtagtgaa
atcgaaaaccaactgcgtcagcggcaacacgagctcgaagagacgcaaaaacgctctgac
aagttaatggagcatattcgaacaactgaaacggctctagaagagcagatgaaattgcag
ggtgatttgacgaacgaagtcgagcagtccaagaaccagatcgatacgctacaaagcaaa
ttagatggaatctcgaaaaatttaggtgaagctaaagtcgacaaacatgaagacgcgcgt
cgccgtaaaaagcaagaaattgtcgagaactttaagcgtctctatcgcggtgtttacgat
cgaatcattaatatgtgccatccggttcaccaacgtttcaacatacccgtaaccaagcta
ctgggtaaatatatggaagccatcgtagttgatactgaagaaacagctcgaaactgcatt
cagtatctcaaagagcaaatgttagagccggaaacatttctccctcttaactatttaaag
gcgaaacctttgaaggagcgactacgtgtcatcagggacccaccgaacgtccgtttgctt
tacgatgtgttgcaatacgacccacccgaaatcaaaaaggccgttttgtttgttaccaat
aatgcattagtttgcgacacacaagaggacgccatgaaagtggcttatgaaatggaagac
ggtgatcgttatgacgctgtggctttggacggcacattttaccagaaatctggtctgatt
tccggtggctctcgggatctggagaagaaggctgcccgctggaatgataaacagctcagt
gccttgaaatccaacaaagaaaaactcagcgaagagctgcgggaagctatgaagaaatca
aggaaagaatctgaattgcatacagtcaattgtaccgtcaaaggtttggattctaggctt
cgctacgcgttgtcggatcgagagaaaaccgccaaacagatagaacagtcacagggagaa
attgtgaaactggaagtccaattgagaaattttgcccctgccaccgatgaaatcgaaaaa
atcatgcgggagagagatttgttaatccaaaatgtcaaggaacgcatgaaccgtgtggaa
gataccgtttttgctgaattttgcgctcagattggtgttgctaacatccgacagtatgaa
gagcgggaactcaggcttcatacatggacccaacaagagcgagccaagaaacgtctagaa
tttgagaaccaaaagaatcggatactcaaccagctggaattcgagcgctcccgggacaca
cagactaacgtggaacgttgggaaagatctgtcagtgacgatgaagaagaactagaaaga
gccaaacaggccgagcaaaaacaaatgagtgagatcgacaaggaaatgcggaagttggat
gacattaaatcgacgcgaatgtcaaaaaagaacgatcttgacaatatggaagaagacatg
gctttggctcgacgagatatgggaacagtggccaaagacctgcagaacgttcaaaagtca
atcaccagcatggaagcgaaaattgatcaaaagaggggcgaaagacatagtattttaaaa
cagtctaagatggaagatattattattccaatgtcacgtggtaacatggaagacatagaa
caagacggcaatatcacagaaagtatgaattctgagtcggtgacaacatcaggaaacgat
tcgcttaacactgtggctaattctcaaactatatacgaacgagaagacagaattgttatt
gattattctgacctacccgataagtacaaagacctctttgaatcggacgaggtgcgccgc
gaaggtgaccgcctacagcgtcatgtaaatgagttgaacaacaccattcagcggattcaa
gctccgaatatgcgagctatgcaaaaattggatttagcgagggaaaagctacatgagaca
aatgaagagttcgaaaaggctcgtgttaaaaccaaaaaagctaaacaggcgttcgagagg
gtaaagaaggagcgcttcgatctcttcatgtcatgttttgaacacgtttccaacgaaatc
gatggcatttataagtcgttggcgaagaaccaatctgcccaagcgtttttaggtccagaa
aaccctgaagaaccttaccttgatggaatcaattacaattgtgttgcacccggtaaacgt
ttccagcccatgtcaaatctttccggaggagaaaagactgttgcagctttggcgctactg
tttgccattcacagctatcagccggctcccttttttgtattggatgagatcgatgctgct
ctggataacacgaatataagtaaagtagctgggttcatccggacgcaaacagccaacttg
caaaccatcgtcatttctttaaaagaggaattttatagccacgctgatgcacttattgga
gtttgtcctgaccctggagagtgtctcatcagcaagatgcttcttctggatcttacccaa
tatccgccccaccagtttgaagagactcaacgtttatga
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