Daphnia magna (water flea): 116922769
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Entry
116922769 CDS
T07514
Name
(RefSeq) AF4/FMR2 family member lilli isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116922769
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116922769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
SR-25
Motif
Other DBs
NCBI-GeneID:
116922769
NCBI-ProteinID:
XP_032785066
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All DBs
Position
LG5:7879929..7888856
Genome browser
AA seq
1399 aa
AA seq
DB search
MSYNLSSRDAGDRSRDRELQAKARAQMSSMLAEPEESFMPVFDAPVRLRPSSGDRTHQMI
VKTLGRYAPSIIEDSKYLIGVYQEPATPLPSREHHDPPDTPPPPSSNSCSSSSSRPEFAT
PTKPAPSSGLGQGHSHQRPTSSGGSLMKPPSHAAPHVAPQRSSAPPGRSSSNSNTTSSMT
GLHKAPGPGPGGGYHSGASSSSSSSSSSSSSSSSSTSSSRQRPPINNMRPHPPKLSFNNP
PPSSTPDQGVGHPDVHDILKEMKSVAVTPLTAIAATPRKEADRFDFGHPHQPPKRMPSNG
GLMDDLSISDSDPDSETESSIKISAAATTSTAPVLSPLPSSPMEPMNSPPRPRSPLSGPA
TAAASEADDSEDDSSSESDGSSSDSSSDGEHVEPETKPPHVSPPKQQQQPQQQQPANTPS
WSLKSFLPINPPSSIFEGTTRGSDVSQSGLDQISLDRRDTLGDSLRRPDDDDDDFFGSSA
GLRFDSPTPASELDDGLFKGDKNATTSSVAKMISDSDSEQPDLNSALSKMIVPEPLLSEM
SDSEDHITPRPNLPSSGSKASTNRRVKQSQSSSKNSLNRLSHSESSSSDDERPVPEARPR
QPVVTAPPALPAPAAPVEAAPKRRGPGRPKKQVNASAPASGKEISKRPGRAPRKQSANVQ
APISREILDTTTSSVSSSSSPSNSEVDVENTPSPLKARKPSLSVTVTPPTTPRKNNVHSQ
SPSKLAAVAKMPTPPTAVASRVLFPSRSRSRSRSSSSSSRRSSSSSSSSSSSSSSSSSCR
SMPSGGGKGQPRPRDEDLQKDYSPPKLDMDSKPNSDRKCALFMKIYRPTGAKGRQDRAAA
PDAAVPTSGGKGVKGKLEPKKVVSEVAASPKAVVAPTPPPPAKVAPAVPYVNGRPSLMCQ
VPLSKLAAPVRPPTQEKNPERPVENKTRTPVPKREAEKSSTPNRSSSKSSKRRSSISSTS
SVSVPPPVVATPSHRKESKRKRKGEGGDDAVETQTGKAQKKKSRRKINVEEAEQEAGPLP
PIVPTPNHIPSVDIKSCLSPFDPRNASPAPPMMRTQQQTQPGTNLVYFSYFEEPPAHQLE
HEDRDHNHFLSEAKALKHAADKQQTDRTLQAVQYLEAVLFFILTGNAMEHDRMTEKAAFT
MYKDTLNLIRYISSKFRHQPQAGTQSANIDAKLQILSLRCQALLYLKLFKMRRHEVKEFS
KVLGDYHAKATTVAVTSPAMGGASGSGIALDMHGQASVGGGVLYRTSGTPSPLSPTPSPA
GSVGSVGSQSSGYSSGELAPGQTSGQVGQQQQRPQQLANNQPLAMSTPNHLNVGPCVSVP
LGVHSVMQKQNQYFSYLCTCHELWEQGDSLVQRAQAQDFFIQLDRQCGPLTFHSSLRDVV
RYVRAGVQRLRDAYIQPGR
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataatttgagcagtcgtgatgccggtgatcggtcacgtgatcgtgaactccag
gccaaggccagggcccagatgtcatcaatgctggccgagccggaggaatcgtttatgccc
gtctttgacgcacccgttcgcctccggccgtcttcaggtgaccggacgcaccagatgatt
gtcaagacactgggccgatacgctccgtcgatcattgaagattccaaatatttgattgga
gtgtaccaagagccagctacgccactaccgagtcgggaacaccatgatccgcccgacact
ccgccaccaccatccagtaacagctgtagtagtagtagtagccggccggaattcgccact
cctaccaagccggccccgtcttcgggcctgggtcagggccattctcaccaacggcccact
tcatcaggtggtagcttgatgaaacctccttcgcatgctgcaccgcatgttgctcctcaa
agaagttcagctcctcccggccggtccagcagtaatagtaatactacaagtagtatgacg
gggttacacaaggctcctggacctggccctggtggaggatatcatagcggtgcgtcgtcg
tcttcttcttcatcgtcatcctcctcttcctcatcatcgtcgtctacctcttcatcgagg
cagcgtccgccaatcaacaatatgcggcctcatccaccaaagttgagcttcaacaatcct
cctccgtcgtcaacgcctgaccaaggcgttggccatccagatgtccatgatatcctcaaa
gaaatgaagtcggtggccgtgacaccgttaacggccatcgctgccactccgcggaaagaa
gccgatcgtttcgatttcggtcaccctcaccaaccgccgaagcggatgccttccaacggc
gggctaatggatgatttgagcatctcagacagcgatccggactccgaaacagaatcctcc
atcaagatctctgccgccgccaccacctctactgccccagttcttagcccactgccttcc
agtccgatggaaccgatgaacagtccaccaaggcctcgttcgccactctctggtccggct
acggccgccgcgagtgaggctgacgattccgaagacgattctagttcggaatcggatggc
tccagttcggattccagctctgatggtgaacacgttgagccggaaacgaaaccccctcac
gtttctccacctaaacagcagcaacagccacagcaacaacagccggccaatactcccagc
tggagcttaaaatcgttcctgcccatcaatcctcctagcagcatatttgagggcacaacg
aggggctctgacgtttcgcagtcaggccttgatcaaatctcattggatcgaagagacact
ctgggcgattcgcttcgtcgtccggacgatgacgacgatgatttctttggcagttcggca
ggccttagatttgatagtccaactcctgcgtctgagctggacgatggactgtttaaagga
gacaaaaacgcgacaacatcgtccgtcgccaagatgatttcagacagcgactctgagcag
ccagacctcaattctgccttgtcgaaaatgatcgtgcctgaacctttgctgtcggaaatg
tccgactcggaggatcatatcacgcccaggcctaacttgccttcatctggttcgaaagcg
tccaccaaccggagagtcaaacagtcccaatcttctagtaaaaacagtttgaatcgtttg
tctcattcggagagtagcagcagtgatgacgaacgtccagtgccagaagcgcggccacga
cagcccgtcgtgacggccccgccagctttgcctgctcccgctgcgccagtggaggccgct
cctaaacgaagaggtcctggtcggccgaagaaacaagtcaatgcatctgcacctgcttcg
ggcaaagagatttccaaacgtccaggtcgagcaccgaggaaacaatctgccaacgtccag
gctccgatatcgcgcgagattctggacacgaccacgtcatcggtgagcagctcatcgtcg
ccgtccaacagtgaagtagatgtggagaacacaccatctccgttaaaggcgaggaagccc
agcctgtcggtgacggtgacgccgccgacgactccgcgcaaaaacaacgtccactctcaa
agtccatcgaaattggctgctgtcgcgaaaatgcccacgccgccgacggccgtggcaagt
cgggtccttttcccatctcgcagtcggagtaggagcaggagcagttcgagcagtagtcgc
agaagcagcagcagcagttcgagcagcagttcgagtagcagcagcagcagtagttgcagg
tcgatgcccagcggaggtggcaaaggtcagccgcgaccgagagacgaagatttgcagaaa
gattacagcccgcccaagctggacatggattcgaagcccaactcggatcgcaagtgtgct
ctgttcatgaaaatctaccgacctactggagctaaaggaagacaggatcgtgcggcggct
cccgatgcggccgttccgaccagtggtggcaaaggtgtgaaaggtaaactagaaccgaag
aaggtcgtaagtgaagtggcggccagccccaaagcggtggtggcaccgacgcctccgcca
ccagctaaagttgcacctgctgttccgtacgtcaacggccggcctagtttgatgtgtcaa
gtacctctaagcaaattggctgctcctgtccgtccgccgacgcaggagaagaatcctgag
cgtccggtggagaacaaaacgagaactccagtgcctaaacgtgaggctgaaaaatcgtca
acgcctaataggtcgtcatcgaaatcttccaaacgacgatctagcatcagttcaacttcg
tccgtctctgtcccgccaccggtcgttgcaacgccatcgcatcgcaaggagagcaaacga
aaacggaagggcgaaggaggggatgatgctgtggagactcaaacgggcaaggctcaaaag
aagaagagcagacggaaaatcaacgttgaagaagcggagcaagaggctggccctctccct
ccgatcgttcctacgcccaaccacattccgtccgttgatatcaaatcttgcctgtctccg
ttcgatccgagaaacgcatcccctgcaccgcccatgatgcgcacccaacaacaaacgcag
ccgggcaccaacctcgtctatttcagctatttcgaggaaccaccggcccatcagctggaa
catgaagatcgtgatcacaatcatttcctgagtgaggctaaagcacttaaacacgcggcc
gacaaacagcaaacggaccggactcttcaagcagtacagtatttggaggcggtgttgttt
ttcatcctgactggaaacgccatggagcacgacaggatgacggagaaagcagcttttacc
atgtacaaggacacgctcaatctgatccgttacatttcgtcaaagtttcggcatcaacct
caggccggcacccaatcggccaacattgacgccaagctacaaattctgtcgttgcgctgt
caggcgttgctctacctcaaactgttcaaaatgcgtcgacacgaggtcaaagagttctcc
aaggtgctaggagactaccatgccaaggccaccacagtggcggtgacttctccggcaatg
ggcggagcctctggcagtgggatcgccttggatatgcacggccaggccagtgtcggtgga
ggtgttctttaccggacgagcggcacgccttcgccactttcgcctaccccgtcaccggcg
ggatcagtgggctcggtgggtagccaatcgtctggttacagtagtggtgaattagcacct
ggccagacgagtggacaagttggtcagcagcagcaaagaccccaacaattggccaacaat
caaccgcttgccatgtcgacgcccaatcacctcaatgttggtccgtgtgtttcggtacca
ctgggcgtgcacagcgtcatgcaaaagcagaaccagtacttcagctacctgtgcacttgc
cacgagctgtgggaacagggtgacagtctagtacaaagagcgcaagctcaagattttttt
atccaactggatcgacaatgcgggccgctcacatttcacagttccttacgcgatgttgtc
cgctatgtccgggctggtgttcaacgactgcgtgacgcctacattcagccgggtcggtag
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