Daphnia magna (water flea): 116922778
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Entry
116922778 CDS
T07514
Name
(RefSeq) protein trachealess
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116922778
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116922778
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_HIF1A
PAS_3
PAS
PAS_4
PAS_9
HLH
SLATT_1
Motif
Other DBs
NCBI-GeneID:
116922778
NCBI-ProteinID:
XP_045030355
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All DBs
Position
LG5:complement(8010409..8019040)
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AA seq
1034 aa
AA seq
DB search
MAGYALGLCGRAAATAAGIRDHFSDESSSASWMVLPPYPHHQYPGGPGSLTAAAAAAAAM
AGSLVGHASMGHHHSAVADYSALATSLQQQQQQQQQQQQQRRSPLSSAAYTHSCILEMRK
EKSRDAARSRRGKENYEFYELAKMLPLPPAITSQLDKASIIRLTISFLRLKDFSSNGDPP
WIKESLSSITSAHSSSSSHGSSSTTSSTTGSSSSSSNKANKGNSRSRSHQNHQHNQHHHQ
HAHHQMQLHQHQHPNSIPASVHVELFDQHQGTHILQSLDGFAFSLGSDGRFLYISETVSI
YLGLSQVEMTGSSVFDYVHTADHAELAQQLGLTLATNQAHHSASSSGTSSSQQLPPSPAS
GTGSVDDGSCCMNPDVTSLMSLESNSAYQGLDRSFCIRMKSTLTKRGCHFKSSGYRVVMV
LCRLRPQSQAYTASKSGVGQPNSGTPGQNQPVPLLGMIAMAIALPPPTVHEVRLEPDMFV
TRLAFDLRIIHCEPRIAELLEFVAEDLTGRSLYTLCHVEDVRLLRKAHTDLMHKGQVMTP
YYRILNRHGGFTWIQSCATVVCNSKNGDEQSIVCVNYVLSRTEMKNLVVDQCQLDSAPSL
PMKSNVFKTDHGAVDVLQSSPEESSSECSESLPKNGVTLSDPHRSSVQSSEQSRPSSEVE
VEVVNAPPEESVSSGMRNRALPGRPHHHRSAKRKYDELGTVSATSDSAMIGLDTNHQHHS
TDNSSSNESVSIQDHHHSNAMTDHQSEVDVARWKRLYAGTMENDSLQDRDLDGSGMNGST
TDFSTDALLSNGKPRSTIQWIGTPPVPSGSSSAAATAAALSVPSLLRQLYASRESVIRAN
VHAAAAAAAGRAQSSYFSNGDTLSTTPTGVPVGNEYPGDVFPPTSSHSYHSASAAAGSFL
PEYLPAMTPPSSVSPRDAAAGALFAAEASLRHSAYSGLTSAESSYTANPTQPLALKPHHH
VHYGHGSLEHHHHAHHHHNSAGAHHQYASVQPLVSTDAGQFYSHAPSGFHLYHPQVAKSS
SSSSVNNSATWYPN
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggccggttatgcgctgggcttgtgcggaagagccgcagccaccgcggctggaatccga
gatcatttcagtgacgagtcttcatccgcctcttggatggtactgccaccctatccgcat
catcaatatcctggcggtccgggaagtttaacggcagcggcggccgccgccgctgccatg
gccggatcgctggttggccacgctagtatgggacaccatcattcagccgttgcggattac
tcagcgttggccacatcgctccagcagcagcaacagcagcagcaacaacagcaacaacaa
cgtcgttcgcctctctcttccgctgcttacacgcattcatgcatattggagatgcgtaaa
gagaaatcaagagatgcggctcgatcccgtcgcggcaaggaaaactacgagttttacgaa
ttggcgaagatgttgcctctgccgccagccatcacgtctcagctggacaaggcgtccatc
atcagattgaccatatcattccttcggctcaaagatttctccagtaatggcgatccaccg
tggatcaaggagtccctctcatccatcacatcagcccattcgagttcttcgtcacatgga
tcgtcatcgacaacgtcatctacgacgggatcttcttcttcgtcgtcaaacaaggccaac
aaaggcaatagtcgttcgagatcccatcagaatcatcaacacaatcagcatcaccatcaa
cacgcacatcatcaaatgcagttgcaccaacatcagcatcctaattcgataccggccagt
gttcacgtagaattgttcgaccaacaccaaggaacgcacatcttgcaaagtctggatggt
ttcgcgttctcgctcggttccgacggccgatttctttacatctccgaaactgtttccatc
tacttgggcctgtcgcaagtcgagatgactggtagcagcgtcttcgattacgttcacacg
gccgatcatgcagaattggcccaacaattgggcctaacattggccaccaatcaggcccat
cattcagccagttcttccgggacgagctcttcccaacaattgccaccgtcgcccgcttcc
ggcactggaagtgtcgacgatggaagctgttgcatgaatcctgatgtaacatcactaatg
agtttggaaagcaactcggcctaccagggcctcgatcgttcgttctgtattcgaatgaag
tcgacgttgaccaaacgtggctgtcatttcaaatcatccggctacagggtggtgatggtc
ctgtgtcgacttcgaccgcaaagccaagcgtatactgccagcaaatccggtgttgggcaa
ccgaacagtgggacgccaggccagaaccaaccggttcctctacttggaatgattgccatg
gccatcgctctaccaccgcctaccgttcacgaagttcggcttgagccggacatgtttgtt
acacgcctagcatttgatttgagaatcattcactgcgagcctaggattgctgagctttta
gaattcgtagccgaagatctgactggccggagtctctacactttgtgtcacgtggaagat
gtccgtctgttgcgcaaggcccacacagatttgatgcacaaaggacaagttatgacaccc
tattaccgaatccttaatcgacatggaggatttacttggattcaatcgtgtgccactgta
gtctgcaactcgaagaacggcgacgagcagagcattgtctgtgtcaactacgtcctcagc
cgcacggaaatgaaaaacctggtggtggatcaatgccaactggattcagcacctagtctt
cccatgaaatccaacgttttcaagacggatcacggagcggtggacgtcctgcaaagttcg
ccggaagagtcgagttcggaatgctctgaatcgttgccgaaaaatggagtgacgttgagc
gatccgcacagatcgtccgtgcagagctctgaacagagtcgaccatcttccgaagttgaa
gtagaggtcgtcaacgctccgccggaagaatccgtttcgtcaggaatgcggaatcgcgcg
ttgcctggccgaccgcatcaccatcgatcggctaaacgaaaatacgacgagttgggcacg
gtttcagcaaccagcgacagtgccatgatcggccttgacaccaaccatcagcatcattca
acagacaattcgagtagcaacgagagcgtatccattcaggatcatcaccactcgaacgca
atgacggatcatcaaagcgaagttgatgtggcccgctggaagaggctttacgccggaacc
atggaaaatgattcccttcaggatcgggatctagatggaagtgggatgaacggaagcact
acagattttagtacagatgccctactgtctaacgggaagccacggtcgactattcaatgg
atcggcacaccgccagtaccatcaggttcgtcttcagcggctgcaacggccgctgccctg
tcggtaccatcgttgttacgtcagctgtacgctagcagggaaagcgtcatacgcgctaac
gtgcacgcagctgcggccgcagcagctggacgcgcccagtccagctatttctccaacggt
gatacactgtcgacgacgccgactggtgtccccgtaggcaacgagtaccccggtgacgtg
tttccacctacctcctctcattcttaccattccgcatccgctgcagccggaagctttcta
ccggagtacttaccagccatgactcctccttcgtctgtgtcacctcgcgatgcggctgca
ggtgcattgtttgctgccgaggcttcgttacgtcattcggcgtacagtggtctcacctcg
gcggagtcttcttacactgccaatccgacacagccactggcgttgaaacctcatcatcac
gttcactacggtcacggttctctcgagcatcaccatcacgcccaccaccaccacaattcg
gccggagcccatcatcaatatgcttccgtccagcctctcgtttcaaccgatgctggccaa
ttctattctcatgcaccttctggcttccatctgtaccatccgcaggtggccaaatcctcg
tcatcatcctcagtcaacaactctgcaacatggtaccccaattga
DBGET
integrated database retrieval system
