Daphnia magna (water flea): 116922839
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Entry
116922839 CDS
T07514
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116922839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmk03032
]
116922839
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116922839
DNA replication proteins [BR:
dmk03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
116922839
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
116922839
BRCA1-C complex
116922839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
RTT107_BRCT_5
BRCT
Yop-YscD_cpl
PTCB-BRCT
Porin_8
Motif
Other DBs
NCBI-GeneID:
116922839
NCBI-ProteinID:
XP_032785180
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All DBs
Position
LG5:8208716..8211090
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AA seq
612 aa
AA seq
DB search
MWFIQRKSDGQTVYLLNKEYDVGRRKCTIEVSDDLSVSRQHLKLTVDYSPLTQVSGQPTL
KIMDLGSTYGVFINPSTTNTGKVEPKTWVNLEADSSFHFGVKNEWIVKWKNISVVCSALG
SAERRRLNKELTMLGAESLSEWQHGITHLVTDKIMLTQKVLDSLLAAIPIVVVDFFEKWV
SLLEQDSYSPLPDASQYTPQIGPALGQFGKQSFIPKEERKSLFLGKTFLFASSNELKSSM
AIAAKRAGGNITSDFEAINTEGVVLMECANSPPDYARLVTSLSSRGERSIPQSEIGLAIL
SCSVEIYCNPRARLASEHSQGCSKPAKASFQCSFRDEETQLATQPFNHKKESEEPPCKRN
KIENPTPESHQVHQPPTKRIHLDDEAAATCEIRPSDKDNDEILKRKSVKPKSGPLCSGRT
NVSVKTEDRKNIMDLSVPQKLHAEFFSRQSSDSSSTLSTNVNPGETSHFQDTRHTTKSEV
GKSIPACLPNKARKSFRSNDQKLKAVNQSVVRSAGLELTSTLPSNSQLKSLSRTSLNGTM
GNDQSRSQWHGCSSPGKLNTSKLIVKTNLVRPEVFEKSSSQKSQNQLKETQVITRIKSMK
IASLKEGKWTKK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttatacaaaggaaaagtgacggtcaaactgtttatctgttgaataaggaatat
gacgttggtagaaggaaatgtaccatcgaagtttccgacgatttgtccgttagtcggcaa
catttaaagctcaccgttgactattcccccctaacacaggtatcgggccaaccaacttta
aaaattatggatttaggatcaacatatggggtattcattaatccttctacaacaaatact
ggaaaagttgaaccaaaaacatgggttaatttggaagctgactcatcatttcattttgga
gtcaagaatgagtggatagtcaaatggaaaaacatctctgtggtgtgttcggctcttgga
tctgctgagagaagaagacttaacaaagagctaaccatgttgggggctgaatcactttct
gaatggcagcatggaatcactcacttagtaacagataaaatcatgcttacacaaaaggta
ttagatagcttacttgctgctataccaattgtggtggtggacttttttgagaaatgggtg
tcactccttgaacaggattcgtacagtcctctacctgatgcctcacaatacaccccacaa
attggaccagctctcggacagtttggcaagcaaagtttcattcctaaggaagaaagaaag
tctctttttcttgggaagacttttctttttgcctcatctaatgaattaaaatcatccatg
gcaatagctgctaaaagagctggtggaaacatcacaagcgatttcgaggctattaatact
gaaggcgttgtgttaatggaatgtgccaattctccgccggattatgcccggttggttacg
tcgttatcgtctcgtggagaacggtctatcccgcagagtgaaattggtttagccattctt
tcctgttctgttgaaatatattgcaatccccgtgcccgccttgcaagcgaacatagccaa
ggttgtagtaagcctgcaaaagcttcctttcagtgcagctttcgtgatgaagaaactcaa
ctggctacacaacctttcaatcacaaaaaagagagtgaagagccaccttgtaaaagaaac
aagattgaaaatccaaccccagaaagtcatcaagtccatcaaccacccaccaaaagaatt
catcttgatgatgaagctgctgctacctgcgaaattcggccttctgataaagacaatgat
gaaatcctgaagagaaaaagtgtgaaacctaaatcagggccattatgtagcgggcgaacc
aatgtcagtgtcaagactgaagaccgcaaaaacattatggatttatccgtcccacagaaa
ctgcatgcggaattttttagtcgacaatcgtctgactcatctagtactttgtccaccaat
gtaaatcctggtgaaactagtcattttcaagatactagacatacgactaagtcggaagtt
ggaaaaagcatacctgcatgtttacctaacaaagctcgtaagagctttcgatcgaatgat
caaaaattgaaagcagtaaatcagtccgttgtgcgctctgcgggcttggagcttacaagc
acattgccttccaacagccaattgaaatcgctcagtaggacatctttaaatggcacaatg
ggaaatgatcagagcagaagtcagtggcatggttgtagcagcccaggaaagttaaataca
tcgaaactgattgtaaaaaccaatctagttcgacccgaggtatttgaaaagtcaagttcg
cagaagtcacaaaaccagctcaaagaaacacaggttattactcgaatcaaatcaatgaag
atcgcttctctgaaagagggcaagtggaccaagaaatga
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