Daphnia magna (water flea): 116922842
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Entry
116922842 CDS
T07514
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116922842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116922842
Spliceosome [BR:
dmk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116922842
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
T2SSM_b
Motif
Other DBs
NCBI-GeneID:
116922842
NCBI-ProteinID:
XP_032785185
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Position
LG5:9121821..9124306
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AA seq
587 aa
AA seq
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MATTSIKRLKEEDPMDGAGREAKKLKSRFHDDSSEDGKTNLDNSEQLSSSQIREMMLNAQ
KMIEERKRSLHQPPALLKTAPVLSSLPAPAVPKAPAPSSMDERAKKIAELQAQIQSKLAT
STLATLNLNLPKTVSAAGSTNEVSSEPKPGPLILNADGRTVDATGKEIALTQYTPTLKAN
IRAKKREVLKTHMGKGPHQQNEEAGSLTESRFFDPRVAAKSALRTRRTFHFHEQGKFQQV
ASRMRMKAQLDKLQNEISQIARKTGINSVTALALVAPRIGDRKEEEEVDLEWWDSVILQT
RSYEGEDGQPNLRQETITNLIEHPIQMRAPTDPLALPYLPVFLTEKERKKLRRTTRRENW
KEKQENIRLGLEPPPQAKVRISNLMRVLGNEAIQDPTKIEAHVREQMAKRLQNHQEANAA
RKLTADQRREKKEKKLQEDTSTTGVHVAIYRIKDLSNLSKKFKIETNAKQLYMTGCAVIF
KDVNVVIVEGGPKQQKKYKRLMLNRIRWEEDAVKVSKHDAGSAAQPETRNSCQLVWEGTT
KQRNFGDLIFKLCPSEVVAREHFRKHGVEHYWDLAYSTAVLEETEEK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctacaacaagcattaagcgacttaaagaagaggatccaatggatggtgcaggacgg
gaagcaaaaaagttaaaatccagattccatgatgatagcagtgaagatgggaaaaccaac
ctggacaattcagaacagctatcttcttctcaaattcgagaaatgatgttaaatgctcaa
aagatgattgaagaaaggaagcgttcccttcatcagccaccagcccttctcaaaactgct
ccagtcctctcatctcttccggcacctgcagttcctaaggcccctgctccatcttcaatg
gatgaacgagccaaaaaaattgcagaattgcaggctcaaattcaatcaaaactagcaact
tccactctggcaacattgaacttgaatctgcccaaaacagtgagtgccgccggatcaact
aacgaagtttctagtgagccaaagcctggccctctcatccttaatgctgatggaagaaca
gtagatgctactggaaaagaaatagcgctaactcaatacacacctactctcaaagcaaat
attcgcgccaaaaaacgtgaggtgctcaagactcatatgggcaaaggccctcaccagcag
aacgaggaagccggaagtttaacagaaagtcgttttttcgacccccgtgtggcagccaaa
tcggctttacggacacgcagaacttttcactttcatgagcagggcaaattccagcaggtg
gcatcccgaatgcgaatgaaagctcagttggataagctgcaaaacgaaatttcgcaaatt
gctcgcaaaactggcatcaactctgtcactgcccttgctctagtggctccccgaattggt
gatcgaaaggaagaagaagaagtcgatttggagtggtgggattccgtcatattgcaaacg
cggagctacgaaggcgaagacggccaacctaatttacgtcaggagacgatcactaatttg
atcgagcatccaatccagatgcgcgctcccactgatccgctcgccttgccctacttgccc
gtcttcctgactgagaaagaacgcaagaagttacgccggactacgaggcgtgagaattgg
aaagaaaaacaggaaaatatccgtctaggattagagccacctccccaagccaaagttcgc
atatccaatttgatgcgcgtgctgggtaatgaagctatacaagaccctacgaaaattgaa
gcccacgtccgagaacaaatggccaaacgtcttcaaaatcatcaggaagccaatgccgcg
cgaaaattgacggccgaccagcgacgtgaaaagaaagaaaagaagcttcaggaggacacg
agcacaacaggtgtgcacgtcgcgatctaccgcatcaaggatttatccaatctgtctaag
aaattcaaaatagaaaccaatgccaagcagctttacatgacaggatgtgccgtcattttc
aaggacgttaacgtcgtcatcgtagaaggtggtccaaaacaacaaaagaaatacaaacgt
ttgatgctgaatcgcatacgatgggaggaggacgccgtcaaggttagcaaacacgacgcg
ggatcagctgctcagcctgaaacgcgaaattcttgccagctcgtttgggaaggtacgaca
aaacaacgcaatttcggtgacctcatcttcaaactctgcccgtccgaggttgtggctcga
gagcattttcgcaaacacggcgtcgaacactactgggacctggcttattccacggccgtt
ctagaagaaacggaagagaagtga
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