Daphnia magna (water flea): 116922954
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Entry
116922954 CDS
T07514
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
dmk04137
Mitophagy - animal
dmk04144
Endocytosis
dmk04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116922954
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116922954
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116922954
04137 Mitophagy - animal
116922954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116922954
04121 Ubiquitin system [BR:
dmk04121
]
116922954
03029 Mitochondrial biogenesis [BR:
dmk03029
]
116922954
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116922954
Membrane trafficking [BR:
dmk04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116922954
Autophagy
Mitophagy
Other mitophagy associated proteins
116922954
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
HECT type E3
116922954
Mitochondrial biogenesis [BR:
dmk03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116922954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
116922954
NCBI-ProteinID:
XP_032785598
LinkDB
All DBs
Position
LG1:2592364..2597659
Genome browser
AA seq
849 aa
AA seq
DB search
MSHTGINRRNGAIKIRLTILCAKNLAKKDLFRLPDPFAKVSVEGSGQCHSTDTCKSSLDP
KWNQHFDLYIGKSDAITISVWNHKKIHKKEGGGFLGCVRIMSNAIQRLKDTGYQRLDLTR
ANANDTDQVKGQIVISLLSREQHNSSSCHDNSASPVVQTVVDALGNVASPALPAGIQDAA
TVSVTAPLPQGWEERRTSSGRRYYVNPESRSSQWTRPIVESSNGAQASSSSVATSTGRES
RRSHSSRERDKRHPAVPVQQSHSLDAVSSSNPSGSSFRRRSVRNRQQQQQSSQQQPPTQQ
QPPTQQQQQQARRPLASDLPDGYEMRKTGQGQVYFYHVTTGISTWYDPRIPRDLRDLPMP
GALPPGWEMRHTPSGRIYFVDHNNRTTQFTDPRLSTGLALQNLLNLHRSDHRAAPLPPQP
SLPPPNTVATSESGACAAPVANSSFSPPPIATPLPDEKQEEALPRYKRDLVAKIKILRTE
LQTMQPQSGHCRLEVSRTEIFEESYRSIMKLRPKDLRKRLMVKFRGEEGLDYGGVAREWL
HLLSQQMLNPYYGLFCYSREDNYTLHVNPDSSVNPEHLSYFHFVGRIMGLAVFHGHHLDG
GFTLPFYKMLLNKPIVLDDITHVDPELHRSLTWMLESDITGVIDTTFSVEHNAYGAIQVH
DLKPDGRDLIVSEENKREYVRLYVSYRFMRGIEQQFLSLQKGFHELIPANLLRPFDEREL
ELLIGGICKIDTADWQANTRLKHCTAETPVVQWFWQIVESYSEELRARLLQFVTGSSRVP
LQGFKALQGSTGASGPRLFTIHLIDAPCENLPKAHTCFNRLDLPPYPSYEKMHEKLTQAV
EETCGFAVE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacacagggatcaataggagaaatggggccattaagattcgactcacaatactg
tgcgccaagaatctcgcaaagaaggatctcttccgtttgcctgacccgtttgccaaagtc
agtgtggagggatctggtcagtgtcacagcacagacacctgcaagtcttcattggacccc
aaatggaaccagcattttgacctatatattggcaagtcagatgctataaccatcagtgtt
tggaatcacaagaaaattcacaagaaggaaggtggaggatttcttggttgtgttcgaatc
atgtccaatgccattcaacgtctgaaagatactggatatcaacgacttgacttgacgcgc
gcgaatgcaaacgacaccgatcaagtgaagggacaaattgttatatctttgttgtcgcgg
gaacagcacaattcttctagctgccacgacaacagtgcaagccctgtcgttcaaacggtc
gtggatgctttgggaaacgtcgcaagccctgcattacctgcaggcatccaagacgctgcc
acggtttcggtcaccgctccgcttccgcagggttgggaggaaagaagaacatccagtggt
cgtagatattacgttaatccggaatcaagaagtagtcaatggaccaggcccatcgttgag
agtagtaatggtgctcaggctagtagtagctcagttgcgaccagcactggccgagagagc
agacgcagtcatagtagtagagaacgagataagcgacatcctgccgttcccgttcaacaa
agtcacagtctggatgcagtgtcgtcgtctaacccctccggatcatctttccgaagacga
tctgtccgcaaccgacaacagcaacaacaatcttcgcaacaacaaccgccaacgcaacaa
caaccaccaacgcagcagcagcagcagcaagcaagacgacccttagccagtgatctaccg
gatggctacgaaatgcgcaaaaccggccaaggtcaggtatacttctatcacgtgaccaca
ggcataagtacgtggtatgatccgcgaatcccgcgggatctccgcgatcttcccatgccc
ggcgctctgccccccggatgggaaatgcgtcatactccttcgggcagaatttacttcgtg
gaccacaataaccggacgacgcaatttacggacccgcgtttgtctacgggactagccttg
caaaaccttctcaatcttcatcgatcagaccatcgtgcagccccattgccacctcaacct
tctctaccacctcccaacaccgtagccacatcggagagcggtgcctgcgcggcacctgta
gcgaattcgagcttctcacccccgccgattgccaccccgctgccagatgagaaacaagaa
gaggctttgccgcgctacaagcgtgacctagtcgccaagataaaaattttacgaacggaa
ttgcagacgatgcaaccgcaatccgggcactgccggctagaagtatctcgcactgaaatt
tttgaggaatcgtatcggagcatcatgaaattacggccaaaagatctacgtaaaaggctg
atggtcaaattccgcggcgaagagggtctagattatggcggtgttgcgcgtgagtggctt
catctcctctcgcaacagatgctcaacccgtactatggtctgttctgttattcgcgcgaa
gataactatacgttgcacgtcaacccagacagcagcgtcaatccggagcacttgtcctac
ttccactttgtcggacgtatcatgggcttagccgtcttccatggacatcatttagatggt
ggtttcacgttacccttttacaaaatgcttctcaacaaacccatcgttctggatgacatc
actcacgtcgatcccgagctgcaccgctccttgacttggatgcttgaaagtgacataacc
ggagttattgacacgactttctcggttgaacacaatgcttacggtgccattcaagtccac
gacctcaagcccgacggccgtgatttgatcgtctccgaggagaacaaacgggaatacgtg
cggttatatgtgtcttaccgttttatgaggggaatcgaacaacagtttctctcgcttcaa
aaaggctttcacgaactgattccggccaacctgctccgaccgttcgatgagcgggaacta
gaacttctcattggtggcatttgcaagatagacacggccgattggcaggccaatactcga
ctcaagcactgtactgccgaaacgcccgtcgtccagtggttctggcagatagttgagtcc
tacagcgaagaactaagggccagattgttgcagtttgttaccggatcatcgcgagtgcct
ctacaaggattcaaagcccttcaaggttcgactggggcttccggtcctcgcctcttcacc
atccacctgatagacgctccttgtgagaacctacccaaggcgcacacatgcttcaatcgg
ctggacctgccaccctacccgtcctatgaaaagatgcatgaaaagctgacgcaggccgtt
gaagagacgtgcggctttgccgtcgagtga
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