Daphnia magna (water flea): 116923522
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Entry
116923522 CDS
T07514
Name
(RefSeq) spectrin alpha chain isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116923522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmk04812
]
116923522
Cytoskeleton proteins [BR:
dmk04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116923522
Intermediate filaments
Intermediate filament-binding proteins
116923522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_7
EF-hand_1
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
116923522
NCBI-ProteinID:
XP_032785900
LinkDB
All DBs
Position
LG7:4932275..4943113
Genome browser
AA seq
2436 aa
AA seq
DB search
MEQTIAPKEVRILETAEDIQERRDQVLSRYSQFKSEARAKRDKLEDSRRFQYFKRDADEL
ESWIFEKLQAASDESYRDPTNLQAKIQKHQAFEAEVAAHSNAIVSLDNIGLEMINEGHFS
AEIIQKRLKELHRLWELLLSRLADKGMKLQQALVLVQFLRQCDEVMFWINDKEAFVSSDE
FGSDLEHVEVLQRKFDEFQKDMAAQEFRVTEVLELADRLIKDGHPEVDTINRRKEELKES
WQRLRLLALNRQEKLFGAHEIQRFNRDADETVAWITEKDVVLSSDDFGRDLASVQTLQRK
HEGVERDLAALEDKVMTLGQEAARLCGIHPDHADQIKAKHQEIENNWESLTGKAKERKRR
LDDSYFLHRFLSDFRDLVSWIHDMKAIIAADELAKDVAGAEALLERHQEHRGEIDAREDS
FRATAEAGQVLVEKEHWAAPEVNEKLITLSNEKQNLLTLWEERRILYEQCMDLQLFYRDT
EQADTWMAKQEAFLSNEDLGDSLDSVEALIKKHEDFEKSLAAQEEKIKALDEFASKLIEG
QHYAAEDVAQRRALLLDRRGALLEKSGQRRVLLEDSFRLQQFERDCDETKGWINEKLKFA
TDDSYLDPTNLNGKVQKHQTFEQEMTANKSRIEELDAVGRELIEGNHWATDRIHSRLEEI
VRLWETLLAATERKGTRLAQASQQQQFNRGVEDLEIWLSEVEGQLLSEDYGKDLTSVQNL
QKKHALLEADVTSHQDRTDAIKSAAQQFIDSGHFDVDSILSKQASVTERFDALQNPMSLR
KQRLLDSLRVQQLFRDVEDEEAWIREKEPIAASTNRGRDLIGVQNLIKKHQAVLAEMHNH
EPHVLAVCQTGFQMADDGHFAADEVHKRIQALTDHWAYLKEKAFQRKQDLEDSLQAHQYF
ADANEAESWIKEKEPLSGSVDYGKDEDSSEALLKKHEALMSDLEAFGSTIVALREQAQSC
PQEAPVSDVSGKECVVALYDYTEKSPREVSMRKGDVLTLLNSNNKDWWKVEVNDRQGFVP
AAYVKKIEPGLSASQQALAEQSSITARQVQIDSQYQSLMALARERQRKLSETCKAYVLVR
EAAELAQWIKNKEQYAHIEDVGEDLEQVEVMQKKFDDFNADLKANEVRLAEMNEIAMQLM
SLGQTEAALKIQTQMEDLNRKWASIQQLTAERAQQLGSAHEVQRFHRDVDETKDWIHEKD
EALNNDDLGKDLRSVQALQRKHEGLERDLAALGDKIRQLDEAAARLVQGHPDSAETINSK
QEEIHDEWTQLTAKANARKEKLLDSYDLQRFLSDYRDLTAWIQSMMGLVASDELASDVTG
AEALLERHQNYRNEIDAHYGIPQEHRTEIDARAGTFQAFELFGQHLLQSNHYASTEVQEK
LENMNVARQELEKAWIGRRMELDQCLELQLFYRDCEQAENWMSAREAFLAAEELDSQGDN
VEALIKKHEDFDKAINAQEEKIAALATFADQLVAAEHYASNAIDGKKIQVLDRWGNLKEA
LIEKRSKLGESQTLQQFSRDADEVENWMAEKLQLATEESYRDPANIQSKHQKHQAFEAEL
AANADRIQAVLAMGQNLIDKHQCAGSEEAVQSRLVSIADQWEFLTHKTAEKSMKLKEANK
QRTYIAAVKDLDFWLGEVESLLTSEDAGKDLASVQNLMKKHQLVDADILAHEDRIKDMND
QADSLIESGQFDAAAIQEKRQSINERYERIKNLAAHRQARLNEAMTLHQFFRDIADEESW
IKEKKLLVASDDYGRDLTGVQNLKKKHKRLESELASHEPAIQAVQDAGQQLMNVSNLGVP
EIEQRLRMLNQAWDELKLMAATRGTKLEESLTYQQFLAKVEEEEAWISEKQQLLSVEDFG
DNMAAVQGLLKKHDAFETDLAVHRDRCNEICEAGNSLIRDGNHHSSSVGQRCQQLQDKLE
TLGSIAKRRKGRLLDNAAYLQFMWKADVVESWIADKENHVRSEDFGRDLSSVQTLLTKQE
TFDAGLHAFEQEGIQNITTLKDQLVSAGHDQTATILSRHGDVLSRWNSLLGASNSRKQRL
LRMQDQFRQIEELYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQAS
LSSAQVDFESLAALDAEIKSFKVGPNPYTWFTMEALEDTWRNLQKIISERDAELLKEAQR
QEDNDRLRKEFARHANAFHQWLTETRLRLLGWDGASMMEGSGTLEQQLEATKRKASEVRA
RRQDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQ
SGVSEDALKEFSMMFKHFDKEKTGRLNHQEFKSCLRALGYDLPMVEEGQVDQEFETIVDI
VDPNRDGYVSLQEYMAFMISKETENVQSSEEIENAFRAITNGERPYVTKEELYANLTKEM
ADYCVSRMNPYVDSKSGKPVLGALDYMDFTRTLFQN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atggagcagactatagctcccaaagaagtcaggatcctggaaactgctgaagatattcag
gagagaagagatcaagtcctctctcgttattcgcaattcaaatcagaagcccgagcaaag
cgtgacaagttagaagactctcgtcgtttccagtatttcaagcgtgacgctgatgaattg
gaatcatggatttttgagaagcttcaggctgcttcagatgaaagttatagggatcctaca
aatctccaagccaaaattcaaaaacatcaagcatttgaggcagaagttgctgcccacagc
aatgcaattgtcagccttgacaacattggacttgaaatgataaatgaaggtcatttttct
gcagaaataattcaaaaacggttgaaagagttgcaccgcttgtgggagctgcttctttcg
cgtttagccgataagggcatgaagttacagcaggctcttgtccttgtgcagttcttacgc
caatgcgatgaagttatgttttggatcaatgataaggaagcttttgtttcatctgatgaa
ttcggatcagatctagaacatgtcgaagtattacaacgcaaatttgacgaatttcagaaa
gacatggcagctcaagagttcagagtaactgaggtcttagaacttgctgatcgcttaatc
aaagacggccatcctgaagttgataccatcaatcgccgcaaagaggaactaaaagagtca
tggcaaaggttgaggttgttggcactgaatcgccaagagaagctttttggtgcccatgaa
atccagcgttttaaccgggatgctgatgaaaccgttgcgtggattaccgaaaaagatgtt
gtcttgtcgtcagacgattttggtcgtgacttagcaagtgtacagacactgcagcgtaaa
catgaaggtgtcgagcgcgatcttgcagctttggaagataaagttatgactctgggacaa
gaagcagctcgcctatgcggtattcatccggaccatgcagatcaaatcaaagccaagcat
caagagatagaaaataactgggaaagcctgactggcaaagctaaggaacgcaaacgtcga
ctagacgactcttactttctacatcgctttttatcggacttccgtgatttagtctcatgg
attcacgatatgaaagccattatcgccgcagatgaattggctaaagatgttgcaggtgcc
gaagccttgctggaacgtcaccaagaacacaggggagaaattgatgccagagaagatagc
tttcgcgcaaccgcagaagccggtcaagtcttggtagagaaggaacattgggctgcaccg
gaagtaaacgaaaaactgattaccttgtccaacgagaaacaaaatttgttgacactatgg
gaggagcgacgaattttgtacgaacagtgcatggatcttcaacttttttatcgggatacc
gagcaagctgacacttggatggccaaacaagaggctttcttgtctaatgaagatctgggt
gattcgctggattctgtcgaagctcttatcaagaaacacgaggacttcgaaaaatcactg
gctgctcaggaagagaaaataaaagctttggatgaattcgcgtctaagctgattgaaggt
caacattatgctgctgaagatgtggcccaacgccgcgcccttttattagatcgccgtgga
gctctactcgaaaagtccggccagcgacgggttttactagaagattccttccgtttgcaa
cagtttgaaagagactgcgatgaaacaaaaggttggatcaacgaaaaactcaagttcgca
accgatgatagctacttagacccaaccaacttgaatggaaaagttcagaagcaccaaaca
tttgaacaagaaatgactgcaaacaaaagtcgtattgaagaacttgacgccgtaggacgt
gaattgattgaaggaaaccattgggctaccgataggatccactcacgcctggaagaaatc
gttcgtttatgggaaacacttttagctgccaccgaacgaaagggaaccagattggctcag
gcctcccaacagcagcaattcaatcgcggcgttgaagacttggaaatttggttgagcgaa
gtcgaaggccagctattaagcgaggactacggcaaagatttgactagtgttcagaacttg
caaaagaagcatgctttattggaagcagatgtaacttctcatcaggatcgcactgatgct
attaaatcagccgcccagcagtttatcgattcagggcattttgatgttgacagcattctc
tccaaacaggctagtgtaacagagcgctttgatgccttgcaaaacccgatgagtttgcgt
aagcagcggcttttagattctcttcgagttcagcaactctttcgcgatgtggaagacgaa
gaagcttggattcgcgaaaaagagccaatcgcagcatccaccaaccgtggccgtgaccta
ataggtgtacaaaatctgatcaagaaacatcaagcggtcttagctgaaatgcacaatcac
gaaccacatgtcttggctgtttgccaaactgggttccaaatggctgatgatggtcatttt
gccgccgacgaggtacacaagcgtatccaggcactgactgaccattgggcctatttgaaa
gagaaagccttccagcggaagcaagatttggaagactcgctccaagcccatcaatacttt
gcggatgccaatgaagcagagtcttggatcaaagaaaaggaacccctgtctggcagtgtc
gattatggcaaagatgaggattcatcggaagctttgttgaagaaacatgaggcactgatg
tctgaccttgaagcttttggatcaacaattgttgctcttagagagcaagcacaaagttgc
ccacaagaagccccagtgtctgacgtttctggcaaggagtgtgttgtggccctgtatgat
tatactgaaaagtcacctcgtgaagtctccatgcgcaaaggagatgttctcactctgttg
aattccaacaacaaggattggtggaaagtcgaagtgaatgatcgccaaggttttgttcca
gctgcctatgttaaaaaaattgaaccaggattgtcagcatcgcagcaggctttggcggaa
cagagttcgatcactgcgcgccaagtccaaatcgatagccagtaccagtctttaatggct
ttggcccgcgaacgccagcgaaaattatctgaaacgtgcaaggcgtacgttttggtgcgt
gaagcagctgaacttgcccaatggattaagaataaggagcaatatgctcacattgaagac
gtaggcgaagatttggaacaagtcgaagtaatgcagaaaaaattcgacgattttaatgcc
gatctaaaagcaaatgaagtacgcttggcagagatgaacgaaattgccatgcagttgatg
agtcttggccaaacggaagcagctctgaaaattcaaacacagatggaagacttaaatcga
aaatgggcgtcgattcagcaactaacagccgaacgagctcaacagttgggatcagctcac
gaagttcaacgtttccaccgtgacgttgatgagaccaaagattggatacatgagaaagac
gaagctctcaacaatgacgacttaggcaaagaccttcgcagtgttcaagcgcttcagcgc
aagcatgaaggcctagagcgagatcttgctgctctaggagacaaaattcgtcaattggat
gaagctgctgctcgtctggtgcaaggacaccctgattctgccgaaaccattaattcaaaa
caagaagaaatccacgatgagtggacacaactgacggcaaaggcaaacgcccgcaaggaa
aaactattggattcgtacgatctccagcgtttcttaagcgattatcgtgacttgactgct
tggattcagtcaatgatgggattagttgcttcggatgaattggcttcagatgttaccgga
gccgaagcacttttggaacgccatcagaattatcggaacgaaatcgatgcccactacggt
attccgcaggagcatcgcacagaaattgatgctagagcaggaacctttcaagctttcgag
ctgtttggacagcatttactgcagtccaatcattatgcttctacagaagtccaggagaaa
ttggagaatatgaatgtggctcgccaagaacttgaaaaagcttggatcggtcgccgtatg
gagttagatcagtgcttggagctacaactattttaccgcgattgtgaacaagccgaaaat
tggatgtcggcacgcgaagctttcctagccgctgaggagttagacagtcaaggagacaat
gtggaagctctgattaagaaacacgaagattttgacaaagccattaatgcacaagaagaa
aaaattgccgctcttgctaccttcgctgatcaactggttgctgctgaacactacgcgagc
aatgccattgatggcaaaaagatccaggtgttggaccgctggggtaacttgaaggaagcg
ttgatcgagaaacgctccaagttaggagaatcgcagactctgcaacagttctctcgtgat
gcggacgaggttgaaaactggatggcagaaaaattgcaattagctacagaagagagctat
cgggatcctgccaatatccaatcaaaacaccagaagcatcaagcttttgaagctgagtta
gctgcaaatgctgaccgtattcaggctgtgcttgccatgggtcaaaatttgattgataaa
caccagtgcgcaggatccgaagaagccgttcaaagtcgtttggtttctattgcggatcag
tgggagttccttacacacaagacagcagagaagtcaatgaaattaaaggaagctaacaaa
caacgtacttacatcgccgctgttaaagatcttgatttctggcttggagaagtcgagtct
cttttgacttccgaagatgcaggcaaagatttggcatcagtgcagaatttaatgaaaaag
catcagttggtagatgccgacatcttggcccacgaagatcgtattaaggatatgaacgat
caagctgattcattaatcgaaagtggacagtttgatgcggccgccattcaggaaaaacgc
caatccattaacgaacgatacgaacgcatcaagaatttggctgcacatcgccaagcaagg
ttgaacgaggcgatgactctacatcagttcttccgtgacatcgccgacgaagagtcctgg
attaaagaaaagaaattattggtcgcatccgacgactatggtcgcgatttaactggtgtt
cagaacttgaagaagaagcacaaacgtctggaatctgagctggcatcgcacgaacctgcc
attcaagcggttcaagatgctggtcagcagttaatgaacgtttccaatctgggagtgccc
gagatcgagcaacgtcttcgtatgctcaatcaggcttgggatgagctgaaactgatggct
gccacccgtggtaccaaactggaagagtctttgacgtatcaacaatttttagccaaagtt
gaggaagaggaagcttggattagcgaaaagcaacaattgctctctgtcgaagattttggt
gacaacatggctgctgttcaaggtctgttaaagaagcatgacgcctttgaaaccgatctt
gccgtccaccgtgatcgctgcaacgaaatttgtgaagctggtaacagtcttattcgagat
ggcaatcaccattcttcttcagtcggccaacgctgtcaacaactacaggacaagctagaa
acccttgggtccattgccaagcgtagaaagggccgtttgctagacaacgcggcttatttg
cagtttatgtggaaggccgacgtagtcgaatcttggattgccgacaaagaaaatcatgtc
cggtcagaggattttggtcgagatctttcctcggttcaaactctactgacaaagcaggag
accttcgatgcaggcttgcacgctttcgaacaagaaggcattcaaaacatcacaaccttg
aaagatcagttggtgagtgctggtcacgatcagactgccaccattttgagtcgccatggc
gatgttctttcccggtggaattcgttattgggagcatccaattcgcgcaagcaacgattg
ctccgtatgcaggatcagttcagacagattgaagaactctatcttacctttgcgaagaag
gcatcagctttcaactcgtggtttgagaatgccgaggaagacctcaccgacccagtccga
tgtaattctattgaggagatccgtgcccttcgagaagcccatgcccaatttcaggcttcg
ctgtcatccgcccaagtcgattttgagtcattggcagctttggacgctgaaatcaagagc
tttaaagttgggccgaacccgtatacctggtttacaatggaagcactagaagacacttgg
cgcaacctgcaaaagattatatctgagcgtgatgctgagctcttgaaagaggcacagcgc
caagaagacaacgaccgtctccgaaaagaattcgcacgccatgcgaatgcttttcatcaa
tggttaacagagacgaggctgaggcttctaggctgggacggggcttccatgatggaaggt
tccggtaccttggaacaacagcttgaagcaacaaagcgtaaggcgtccgaagtaagagct
cgtcgacaagatttgaagaagattgaagaccttggtgctatcttggaagaacatctgatt
ctagataaccgttacactgaacacagtactgtcggcttggctcaacaatgggatcagctg
gaccaactaggaatgcgcatgcaacacaatttagaacaacagattcaagcccgtaatcag
tcaggagtcagcgaagacgctcttaaggaattctctatgatgttcaagcattttgacaag
gagaagactggccgtctgaatcatcaagaattcaagtcttgtttacgtgcgcttggatac
gatcttcctatggtggaagaaggtcaagttgatcaagaattcgagaccatagttgatatt
gtagatcctaatcgcgacggatatgtgtccctacaagaatatatggcttttatgataagc
aaagaaactgagaatgtccaaagctcggaggaaattgaaaacgctttccgtgccatcacc
aacggcgaaaggccttacgtcaccaaggaagaattatacgccaacctcacgaaagaaatg
gccgactattgcgtttcacgtatgaacccttacgtcgactccaagtccggaaaaccggtc
ctgggcgcgttagattacatggattttacccggaccctattccaaaattaa
DBGET
integrated database retrieval system
