Daphnia magna (water flea): 116923629
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Entry
116923629 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Va
KO
K10357
myosin V
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116923629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116923629
04131 Membrane trafficking [BR:
dmk04131
]
116923629
03029 Mitochondrial biogenesis [BR:
dmk03029
]
116923629
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmk04812
]
116923629
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116923629
mRNA cycle factors
P-body specific factors
116923629
Membrane trafficking [BR:
dmk04131
]
Others
Actin-binding proteins
Myosins
116923629
Mitochondrial biogenesis [BR:
dmk03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116923629
Cytoskeleton proteins [BR:
dmk04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116923629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
AAA_22
AAA_16
nSTAND3
Myosin_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
116923629
NCBI-ProteinID:
XP_032785991
LinkDB
All DBs
Position
LG5:complement(10838916..10846398)
Genome browser
AA seq
1845 aa
AA seq
DB search
MSTAVLYTKDAKVWLPDPVNVWKIGKILEDFKSDSLKLAVETGEEIKVPIKDIKDLPPLR
NPEFLIGGNDLTSLSYLHEPAVLHTLKVRFMNYNAIYTYCGIVLVAINPYQELSIYSQDT
VLAYRNRNQYGSLDPHIFAVAEEAFTKMERESQDQSIIVSGESGAGKTVSAKYAMRYFAT
AGGSSTETQVERKVLASSPIMEAIGNAKTTRNDNSSRFGKYIELGFNKDYHIQGAGMRTY
LLEKSRVVFQSAEERNYHIFYQLCAASSLPEMAYLQLQHQDHFLYTRQGGCPSIEGVDDL
AEFQETRRALLLLGFSEDQQADIFRLLAGILHLGNVTIVDADHEGSNISKTDTYLASFCS
LVGLDVGLSEELRKWLCFRQIVSMKEVFTKPMTKAEASFARDALAKHIYSLLFQKIVSMI
NKSLASSSRPHRFIGVLDIYGFETFEWNSFEQFCINYANEKLQQQFNQHVFKLEQEEYVR
EKIDWTFIDFYDNQPCIDLIEKPLGILDLLDEECRVPKGADQAWVEKLYIQCKKYDQFVK
PRLSNSAFIIVHFADRVEYQCLGFVEKNRDTVLEEQVQVLRSSSNGIVRQLILDEETIVG
GRSPAAAAAGSRSVVGTVPRGGGSLMVPGGASGRQSNTMTKQNRRTVGSQFRESLTLLMN
TLNATTPHYVRCIKPNDSKESFVFEPRRAVQQLRACGVLETVRISAAGFPSRLTYEEFIV
RYRVLFHSRQCQRKQRDLSHQREACESVLSTLITEDDKFKFGANKIFFRAGQVAYLEKRR
TDKLRACGILIQRMIRGWFYRKRYLKLRLAVVGVQRFCRGHLARRKAQHLRETRSAITIQ
RHVRGFLQRRSYTRLRQTVLGLQTYGRGFLARKKYLQLVCNSKAVIIQKMVRSFLARRRY
LRARKSIILLQCCWRRWLARRQYKALRAEARSIEHVKNLNKGLENKIISMQQRIEEMNKE
LIPLRQKQNDYAELKIQCEANRGLANELKVSVGRIGELELLVKQLQTQLDRERDEKMDLV
LERERLDKHNEELNSRIDNIQKELLNSAETNQTRSQEAEDAIKRRLDQERAILAQEYDQE
RAAYQKLLQDYHEMEERMEEAERELERLREEPGKTSKSETVRGHSRNASNVSTLSNTSEL
IADPEDDGGYGSVRLVPNRSDSEDVGLVLKLQQRLKTVEKDKATLATRVEELERESPTAD
VRRAQDMIRLQELEMENAKIKEDLKNLRRQSATEHEGHLSRSPDMLMSQFEAMSDELDRR
REECIQLRTVLANTTLGGELGEQTALNASRLNGGEPFAEDNEILLAFETQKRIIRHLENE
LQEEKAASQRKIQIERDEVERLRIDNERQAKVLAGALHRTPQGQTDAVMQHEISRLTADN
LDLQEKNDLLSEQLKKYRSQMKLSKKMKQDGLMTEQQEITQEVHETVHSSRRNERSESLP
VVRKKDTNYLGMFDFNMGDEKQIARNLVYELKPRVASTLLPGLPAYIIFMCVRHADYINN
DEKIRSFLTLIINAIRRLIKKRYEDLDTSVVWLVNTCRLLHSLKQYSGEKTFQEENTPKQ
NEQCLRNFDLSEYRQVLSDIAVWIYQAVIKFMEERVQQLIVTAVLEHEAISGLSSHKQPV
GQSGRARSGSTRDTTSPVDPQEAIAHLLRELTIFHQVLQLYGVDPPLIAQAFRQVFYYIC
ACALNNLLLRKEMCHWSKGIQIRYNISHLEQWVRDQHIHGQDTMSASIADTLQPIIQAAQ
LLQARKSDDDVTNICVMCSRLTSAQIIKILNLYTPADELEDRIPISFIRKVQEELQKRND
PQAQSKLLMDTKHAFTVRFPYSPSSIKLEDIDIPAVLNLPMLKKV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagccgtgctttataccaaggatgcaaaggtatggcttcctgatccagtcaat
gtctggaaaattgggaagattttagaggattttaaatcagattcattgaagctagcagta
gaaacaggagaggaaattaaagtgccgatcaaagatatcaaagatctaccaccacttcga
aatccggaatttctcattggaggcaatgatttgacatctctttcttatttgcacgaaccg
gcggttttgcatacactcaaagttcgtttcatgaactataacgctatttacacatattgt
ggaattgtactagtggctatcaacccctaccaagaattgtcaatatacagccaagacaca
gttctggcctacagaaataggaatcagtatggcagtctggacccccatatatttgcagtg
gctgaagaagcctttaccaaaatggaaagggaaagtcaagaccagtcgatcattgtctcg
ggagaatcgggagcaggaaaaactgtttctgccaagtacgcaatgcgttatttcgctaca
gctggaggttcaagtaccgagacgcaagtggagcgtaaagttctggcttccagccccatc
atggaggctattggaaacgccaaaaccacaagaaacgataatagctcacggttcggcaaa
tatattgagttaggcttcaacaaagactaccacatccaaggagcaggcatgcgcacttat
ttgctagagaaatcgcgtgtggtttttcaatctgctgaagagcgcaactaccacattttt
tatcaactgtgtgcagcatcttccttaccagagatggcctaccttcagttacagcaccaa
gaccattttctctacactcgccaagggggctgtccttctatagaaggtgtcgacgacctg
gccgagtttcaagaaacacgtcgcgctcttttgcttctcggcttcagcgaagatcaacag
gcggatatatttcgcttacttgctggcattttgcatctcggaaacgtcacaatcgtcgac
gccgatcacgaaggcagtaacatttccaagacggacacttatttggcctcgttttgttca
ctggtgggacttgacgtgggcctcagcgaagaactccgtaagtggctctgcttccgccaa
atcgtcagtatgaaagaagtgtttacgaagcccatgactaaagcggaagcttcatttgcg
cgagatgccttagccaagcacatctattctctcctgttccagaagattgtgtccatgatc
aacaaatcgcttgccagttcgagccgccctcaccgcttcatcggcgtcctcgacatctac
ggttttgagaccttcgaatggaacagttttgaacaattctgtatcaattacgctaacgaa
aaattgcagcaacagttcaatcaacacgttttcaaacttgagcaagaagagtacgttcgt
gaaaaaattgattggacctttattgatttttacgacaaccagccgtgcattgatttgatt
gagaaaccattaggcattcttgatttgctagatgaagaatgtcgcgtacccaaaggtgct
gatcaagcttgggttgaaaagctttacatccagtgtaaaaaatacgatcaatttgtcaaa
ccacgtttatccaattcggcgttcatcatcgttcatttcgctgatcgcgtagagtaccag
tgcttggggttcgtcgaaaagaatcgcgatacggtgctagaagaacaggtacaagtattg
cgtagcagttccaatggcatcgtacgacagctcattttggatgaagagaccatcgtaggt
ggccgttcgcccgcggcagctgcagctggatcacgtagtgtcgttgggacagttcctcga
ggaggtggcagcttaatggttccaggaggtgcctctggtagacagtctaacacaatgacg
aaacagaatcgtcgaactgtaggctcgcaatttcgggaatcattgacacttttgatgaac
actttaaacgctacgactccacactatgtccgatgtatcaaacctaacgattccaaagaa
tccttcgttttcgaaccacgccgtgctgtccagcaactccgagcctgtggtgtcctggaa
accgtacggatcagtgctgccggattcccttcacggttgacatatgaagaatttatcgtt
cgatatcgagtcctcttccatagccgacagtgccagcgaaagcagcgcgacctatcccat
cagcgagaagcttgcgagtctgtgctatcgacgctcattacggaagatgataaattcaaa
tttggtgccaacaaaattttcttccgcgccggtcaggtggcatacttggaaaagcgccga
acagacaaattacgcgcttgcggaatcctaattcagcgaatgattcgcggctggttctat
cgaaagcgctacctgaagttgcgcttggcagttgttggcgttcaacggttttgccgcggt
catttggctcgtcgtaaggctcaacacttgagagaaacccgatcagctattactatccag
agacatgtacgaggattccttcagcgacgctcctacacccgccttcggcaaacggtactc
ggcctgcagacctacggccgtggattccttgcccgcaagaaatatttgcaattggtgtgc
aattcaaaagctgttattattcaaaaaatggttcgtagtttcttggcacgtcgtcgttac
cttcgcgcacgcaagagcatcatcttattacaatgctgctggcgacgttggcttgcccgt
cgtcaatacaaagctcttcgagcagaagcccgttccatcgagcacgttaaaaatctcaac
aagggtctagaaaacaaaatcatatctatgcaacagagaatagaagaaatgaacaaagaa
ctgattcctcttcgtcagaaacagaatgactacgcggaattgaaaatacaatgtgaggct
aaccgaggtctggccaacgaactgaaagtctctgtcgggcgaataggcgaactggaattg
ctggtcaaacagttgcaaactcaactagatcgcgaaagagatgaaaagatggaccttgtg
ctagaacgtgaacgattagacaaacacaacgaggaactgaatagccgaatagacaatata
cagaaagaactcttgaattcggcggaaacgaaccaaactcgcagtcaggaagcggaagat
gccatcaaacgaaggctcgatcaagaacgagccattctagctcaagaatatgaccaggaa
cgagcagcctatcaaaaactgttgcaggactatcatgaaatggaagagcgaatggaggag
gcggaaagagaacttgaaaggttgcgtgaagagccgggcaaaacgagcaagagcgaaact
gttcgtggccattctcgtaatgcatccaatgtcagcacgctgagcaataccagcgaatta
attgccgatccggaagacgatggtggctatggatctgttcgtcttgtgccaaatcgttca
gacagcgaagacgttggtttagtattgaaactacaacagcgactgaagactgttgaaaag
gacaaggcaacgctggccactcgagttgaggaattagagcgtgaaagtccaacggcagat
gttaggcgagctcaggacatgattcgcttacaagagctagaaatggaaaatgcaaaaatt
aaagaggacctgaaaaatcttcgtcggcaatcagcaacagaacatgagggtcacctgtcc
cgcagtccggatatgttaatgagccaattcgaggccatgtccgatgaattagatcgtcgt
cgcgaggaatgcattcaattgcgaactgttttggctaataccacattaggaggtgagctc
ggtgagcaaacggcattgaatgcgtctcgacttaacggaggcgaacctttcgcagaagac
aacgagatcttgttagcgttcgagactcagaaacgcatcatacgacatttggagaatgaa
ctacaggaagagaaagcggcatctcagcgcaagattcaaattgaacgggacgaagtagag
cgtcttcgaattgacaatgaacgacaggcaaaagttttagccggagctttacatcgtaca
ccacaaggtcagacggatgcagtgatgcagcatgaaatttctcgactcacggcagacaat
ttggatttacaagaaaagaacgatcttctaagcgagcaactcaagaaatacaggtctcaa
atgaagctatcgaaaaagatgaaacaggatggtttaatgacagaacagcaagagataact
caagaagtgcatgaaactgtacattccagtcgtagaaatgaaagaagcgaatcgctgcca
gttgttcgtaaaaaggatacaaactatctaggaatgttcgatttcaacatgggcgatgaa
aaacaaattgcccgaaatctcgtttatgaactgaaacctcgcgtggcgtcaactctcttg
ccagggctccctgcctacatcatcttcatgtgtgttcgacacgcagattacattaacaat
gacgagaaaattcgttctttcttaactcttatcatcaacgccattcgccggttgattaaa
aaacgttatgaggatctagacacgtctgttgtctggttagtcaacacgtgcagacttcta
catagtctaaaacaatacagcggagagaagacttttcaagaggagaataccccgaaacaa
aatgaacaatgcttgcgcaattttgatttgtcagagtacagacaagttcttagcgatatt
gctgtatggatttatcaggccgttataaaattcatggaagaacgcgttcaacaacttata
gttaccgccgtgttggagcatgaagctatttctggcctttctagtcacaaacaaccggtt
ggacaaagcggcagagcaaggtcgggctcaacgagggacactacaagtccggttgatcct
caagaggcaatagctcatctgttgcgagagttgaccattttccatcaagtgttgcaattg
tatggcgtagacccaccgcttatagcccaagccttccgccaggtgttttactatatttgc
gcgtgcgcgttaaacaacctactgctgcgcaaagaaatgtgccactggtctaaaggcatt
caaatccgttacaatatttctcacttggagcaatgggtgcgtgaccagcatatccatgga
caggacacgatgagtgcttctattgctgacacgttgcagcctatcatccaagctgcccag
ttgcttcaagcccggaaatcagatgatgatgtcactaacatttgcgttatgtgttcgcga
ctaacaagtgcccagatcataaaaatactgaacctctataccccagctgacgaactggag
gatcgtatcccgatcagttttatccgcaaagtccaagaagaacttcagaaaagaaacgat
ccacaagcgcagagcaaattgttgatggacacaaaacacgcattcacagtgcgtttcccc
tacagtccttcttcaatcaaattagaagatatcgacattccagcagtcctgaacttgccc
atgttgaagaaagtttaa
DBGET
integrated database retrieval system
