Daphnia magna (water flea): 116923696
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Entry
116923696 CDS
T07514
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116923696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116923696
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116923696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
DUF922
PUMA
Tropomyosin
Hormone_1
YwqH-like
Motif
Other DBs
NCBI-GeneID:
116923696
NCBI-ProteinID:
XP_032786101
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All DBs
Position
LG1:5204313..5207586
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AA seq
787 aa
AA seq
DB search
MAFNFGTPSTGQTPGFSFGSQPQQTTPAFGAPATTTPALGSTFGQSATSGFSFGQTTTAQ
PPATGGLFGATKPGLSFGTGSTFGAPTTSAAATPAFGQPATSTFGFGTSAGTTPAFGLGQ
PAGTTAAPAPAFGTASTATTGFGFGQSAAAPAFGAAQQPATTPSFSFSTQPTSTSVASPF
SLGSSTAPASSFGQASAQPAFGQASSAQPAFGQAATQPAFGQAATQPSFGQATAQPAFGQ
TSAQPAFGQSTPASQSGLSFGQTSTPASTGLSFGQPAAVQPVGGGLSFGQTTTPASTGLS
FGQPTTTSSTGGFGFGQPSTTSTAGGFGSSVGGGLSFGQPATTGATGGFSFGPPAPTAVA
TPATGTLSFGQPAAVATTTTTTPFSFNQPAPTAATTSAPPAYSFTTPASTTGLSFGTPVT
SAATPAAGGFSLGTASVLPTLGQQSGTTPSFGAATATASALPSFGAPTATSAAQPTLSLG
TTTSTPSFGTQQTATSSAVQPAPTLSFGSTTTPTTGFSFGAPTTTADATKVAPTVAPATT
VTPVTSTTAVSSAPSFSFGTIPATTVAVAPATTTSIVTSTSATPSSTASTPAVGAALTFR
QLEESINKWSVDLDEQEKTFLNQANSVASWDRLLVSNGEKIVALSDSVNRVKKDQVRLES
ELDFVRAQQRELEEMLIPLEESLQQEVNNMPHDTERDHTYQLAENIDSQMRRLADDLKEI
IERMNAASRQHEATADPIAKIARILNAHTDSLQWAESSCTALQRKLDDVGRGLEQQRRDQ
DRSFRFA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaactttggaaccccatcaactggacaaaccccaggcttcagttttggaagc
cagccccagcaaacaactccagcatttggggcacctgctacaaccactcctgccctagga
tcaacatttggacaatctgctacgagtggctttagttttggacaaacaaccacagcccag
ccaccagctacggggggtttgtttggtgccacaaagccaggtctctctttcggaacagga
tccacctttggggccccaacaacatctgctgccgcaacaccagcttttggacaacctgca
acatcaacctttgggtttggaacatctgcaggaacaaccccagcatttggattgggacag
cctgcaggtactacagccgctccagccccagcatttggtactgcttcaacagcaaccacc
ggttttggttttggtcagagtgctgcagctcctgcatttggagctgcacagcagccagct
accaccccttcattctcattcagcacacagccaacatccacttcagtagcatcaccattt
tcattgggctcatcaacagctcccgcgtcgtcttttgggcaagcgtcggctcaaccagcc
tttggacaggcatcgtcagctcagccagcctttggacaggcagcaactcagccagctttt
ggacaagcagcaacccagccatcctttggacaggcaacagctcagccagcctttggacaa
acatcagctcagccagcttttggtcaatcaacaccagcctcccaaagtggtctaagtttc
ggccagacatccacgccagcttcgacaggtcttagttttggtcaaccagcagcagttcag
ccagttggtggtggcctttctttcggccaaacaactacaccagcttcgactggcctcagt
ttcggtcaaccaactacaacttcgtcaactggaggtttcggcttcggtcagccctctaca
acatctacggctggaggttttggatcttcagttggtggtggtctttcatttggtcagcca
gcaaccaccggggccacgggaggctttagtttcggtccgccagcccccactgctgtggca
acaccggcaactggaacccttagctttggtcagcctgctgcagttgcaactacgacgact
accacaccttttagttttaatcagccagcaccaaccgccgcaacgacttcagcacctcca
gcctacagttttactactccagcatccacaacaggactcagtttcgggacgccggtcact
tctgccgctactccggccgctggtggattctcgttagggaccgcctcagttttaccaaca
cttggtcaacagagtggaacgactccttcttttggagcagctactgcaacagcttccgct
ttaccttcatttggtgccccaacagccaccagtgctgctcaacctacactttctctcggc
acaacaacgtctacaccctcatttggaacgcaacaaacggcaaccagcagtgccgtacaa
cctgctccaacactcagtttcggatcaaccacaaccccgacaacaggcttttcatttgga
gctccaacaacgaccgctgatgcaacaaaagtagctccaacagttgccccagctactact
gttacccctgttacatccaccacagccgtttcttctgcgccatccttcagttttggaaca
attccggcaacaactgtcgcagtggccccagctacaacaacatccattgtcacctcaacg
tcagcaaccccatcaagcaccgctagtacacctgccgttggcgctgccctgactttccgt
caattagaagagtcaattaacaagtggtcagttgatctggatgaacaagagaaaactttt
ttaaatcaagccaattcagtagcctcttgggatcgacttttagtttcaaacggtgaaaag
attgtcgcattgagtgactctgtgaacagagtcaagaaagatcaagtgcgtttagagtca
gaattggatttcgtccgtgcccaacaacgtgaacttgaagagatgctcattccgttggaa
gagagccttcagcaagaagtgaacaacatgccacacgatacggagcgcgatcacacatat
cagctagcggagaatatcgattcacaaatgaggcgattggccgacgacctaaaagagatt
atcgaaagaatgaatgcggctagcaggcagcacgaagcgacagctgatccgattgccaaa
atagcgcgaattctgaacgctcatacagactcccttcaatgggcagaatccagttgtaca
gctctgcaacgcaaacttgacgatgtaggacgtggacttgaacagcagcgcagagaccaa
gatcgttctttccgttttgcctaa
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