Daphnia magna (water flea): 116923747
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Entry
116923747 CDS
T07514
Name
(RefSeq) uncharacterized protein LOC116923747 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116923747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116923747
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
116923747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WSD
PHDvar_NSD
C1_2
Motif
Other DBs
NCBI-GeneID:
116923747
NCBI-ProteinID:
XP_032786163
LinkDB
All DBs
Position
LG5:complement(10093322..10104804)
Genome browser
AA seq
3084 aa
AA seq
DB search
MAAANDAIVVTCTNNSDYAVICSFFEQFGDKSGLLFPSFQDLQEMLENVEEVSYPLIELH
VKLMRKLKKSVSFDRWEKAAAKYAHSYSDQDGWAIERFGYKKLNLDVKLRLLKNLLEAQF
DCNIKFKNEINKVTSEELRLQPLGKDIHGRRYWHLLDDDCNLRVYREDLDEETWDLVSSD
KESMLKLIEHLNSCKDLQEDGGTSPATSEENSANGQEEYPKVETEDQVQQPLESPTGAKR
LKVETVEVPATSDSHLECIVGETIESPILVIKGEGNGADCDTGNPGEGKNEESCESHCSN
NEQGKLGNTSAVACEADDLKPCTEAVDPLTILHPKMESFSSVSSSVCKSNSSNFVSDDAE
EARHLQIRNETSVEAESETKLTVPKNCSENPSALNSYDKEISGSSCKQTDSAIVHPPSGD
ASSCKEIIHVGGSLISLLREDVKPVSIEKPSVEVNVFPNQEGYLKPSEDNGSAKESNDDE
NRSFIDASDRHAVPEQTSTFETSTQQSFSHNQELPKFGGSSPTVGLDPIQLKSPTAVESA
PISDDPVSSDHFSPSTSEIVTPNLVPSAECIPSAIEEVEEKKQIAESLSVPACSTLVQKD
SSEIEESHPEQIIELKTEPLENINSNVIINANTTEAESQLTIQTPRESPAQSGINHEKVI
PVVDRSTPCDENIKWKVDQTSKSSDVPNVLKDSIIEESGPLDIGEASAIQSAESFLPGSG
PLSEKTPTVAVVDCTKDSDPPSVFCSLQEKPQCSESDPIIEDTNPLMLKEENNYLSPGNE
SEETKEAQAVISSLSDVPVPQTNDLTNALQAVGTMSAPVPDIEEDSETRTCPDTVNQSGS
EECVVSVVRTSPEPPPDEVDTLSVFKLSEVNYVNPENPQDADKLSNSTVQDLAGGKKILR
IMEDKLHPVENEPSTNWVENAADNEELAETECLSNSEEKGEKDPENLKSKQSLEDLQQGN
ELTNTTDTLDKKISADESKVIGEIPNLSAEKSLFSTEKGQEFLVLQKNVLKEVQPKKILE
SEEKESIPLASRKDEIPPVQHEFESNATSQDITLNQGDAPKVEENNQANTLGEDSPGSQG
AIEPDSSLEIESSAISEDIEPKQADETKAKENSVATALAIVPSGPEVAEEPEPEPNLKLE
PNVISQDIGYKQAVKAKAEEDSVATALAKSPSGSEVAEEPDPNLELESNAISQSIELKQN
DESKTEEDSVATALAKVPFGPEVAEEADPKLELEANMISKNIEPKQADESKAEKDSVVTA
LDKAPSGPEVAKEKNPILELEAKAISQNIESKQTDESKVEKDSVATALAKSPSGPEVAEV
TDPKLELEANAISQNIEPKQADESKVEKDSVATTLAKVSSGPEVAEEKDPNLELESNAIS
QNIEPKQADKYKAEEDSVATALPMFPSRPDVAEEPNSNLELESNAISQDIEPKQNDEPKT
EEDSVATALAKSPTGPEVAEKPDPNLESNAISQDIEPKTEKDSVATALAEIASEPKVVDE
PIASLDDPPKIESIVVETAKVLKEDSEKDADVPTPTDKHEAILLKFSEEVPPRTISEIKQ
KSELLEGFDGNYKVSVDPVQKKLKEEILIDVVKQELLSVQEEPESNSISMISPKRELWQT
KSETVLSHELPENEEISVMTIKEVQSDVGNEVLSVATSEVMTEKEPSVEDPKTCSQGSGL
SRKKVRISSFKQELLIPKSLLNTELQRDEDILSSQPKIPVLLVKEESPPMVPDKSAPDDI
RYGCGSKILTAVPKESQGEERALADELETIPRSASPDGKEKNLQKTPASSIPEKEEVGPM
SEVVQSEANDTLPKVPTSSETPENEEEKTTNLPNAEKSSNLNQLTFDFDSSAPVSIILPP
SKKPDTSTKRRGRKRGRFGHDGNTDSGKENDAQPTVLRQSSRIAKLREKEDEDRRKEEAE
RLQRLKEEHERREKRRTARDEKMKKMEEKQQRRQLKTTTREDVTYKQSEEESSSSDEEKN
SEEEGRKKKSKKDKRRHRKKKIDRPWDSTDSSEKSSESDVDGLDDLQVEEENEELVFKSD
HEFSPESDLDGEEEIVQPTKHARTARAGIAPKKRGRSKKVKVEEEIEEEEAAATEEEEEE
EEAKCHKCGQSDHPEWILLCDRCDGGWHANCVKPPLLVIPEGHWFCPPCDHATLLERLQE
RLEAYEFLLQEKEAELERKKEQELEAKLAKEEADKQALLEAEEEAQEDDEEDDKISEAGD
LGADGEDEETSEDSGEDEDDEDDDDAENDESDENLNGRRQRKAAKQANYSFKDFDDMIKS
ALRDEDVEEEEESGGKGKGKGPRSGVEGNSDEDADKPRSPPGSRPSGIGNKRISTSDDDS
DIMPQVIRKKKARKLNDLSATSNEDDSDEDFQGSSAEGSDSEDDDEEASDSGDSFVVDDD
SDDYDVIHVRAKKKARVASPTIRRSARSSRKRNLRMDSSDTSEEESEYEEKPTKRKKGNE
SWDSSGASSSDASWGRSKKRSATKSRAKPVAAPKPKPKPPPRKAPANRGRGRGGRTNKVE
SDDEPFRSNVSVKKIKEAQPVKAQEEEDSDHAQKRTTRGRQISYKELISSGDSQDEDGNT
AKKMGTLFAADRIRNMPGAAIRGGSSRRGGRGGVITQAPGRANVSGDDCTPVPVSVISSR
IGVTLNQDDESRFSGSTDTIEFSSAVASATAAASAYTTGDESHTSTDIVTPSIDPDLSTL
PLVLPQEDEASPIIKDELPAIVPVPVLSQDLQVSRLIQQRPVDVPPTLPPDLQINRLINS
HTISSSSNSPARQSPGILPQQRLLRDVLDSQTPPPAVQLSPILPTPPPPIIAPSVESPLY
SHSGVIKQTRHSLPPTPPLYSSPHVVKTSDLIASSTPPSVIRPYPTTATASPLSPSISGS
STPGNPLSIQGLLGTGHGSPGSNPSAPPSSHPSGHLRPYGNTPHMIGHGPFLNHTPYANP
YSTAPPSRTSYMGTPVTPTPRQAYPPMYSSPHLPPHGLPLHSPYQHHGSPLRPTSSYQHA
GFPQAFAAAAAAAASAEEERRIYRVAAQASRESGADNYEPAASAGLLLKSGAEDPAPATA
VPPESEFGGLVSYFSSQQEDFEES
NT seq
9255 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagccaacgacgctatcgtcgtaacctgcacaaataattcggattatgccgtc
atatgctccttcttcgaacagtttggagataaatccggattactatttccttcgtttcaa
gatttacaggaaatgctcgaaaatgttgaagaagtttcctatccacttattgaattgcat
gtaaaactgatgaggaagctgaaaaagtctgtgtcttttgaccggtgggaaaaagcagct
gccaagtatgcacattcttattctgatcaagatggctgggcaattgaaagatttggttat
aagaagctaaatcttgatgtgaaattaagattacttaagaatttactcgaagcccaattt
gactgcaacatcaagttcaaaaatgaaattaacaaagtaacaagtgaggaattaagatta
caacctctggggaaggatattcatgggcgccgctattggcatctccttgatgatgattgc
aacctaagagtttaccgtgaagatttggatgaagaaacttgggatctagtttcaagtgac
aaggaaagtatgctgaaactcattgaacaccttaattcttgtaaagatttgcaagaagat
ggaggaacatctcctgcaacatcagaagaaaatagtgctaatggccaagaagaatatcct
aaagttgaaactgaagaccaagtacaacaaccacttgagagtcctactggggcaaagaga
ttaaaagttgaaactgttgaagttccagctacttcagattctcacctggaatgcattgta
ggtgaaaccattgaaagcccaatccttgtaattaaaggtgaaggaaatggggcagactgt
gacactggtaatcctggtgaaggcaaaaatgaagaatcatgtgagtctcactgttcaaat
aacgagcagggtaaactgggcaatactagtgctgttgcttgtgaggcagatgacttaaag
ccctgtaccgaagcagttgatcccttgacgatcttacacccaaagatggaatcattcagt
tcagtgtcaagtagcgtttgcaagtctaacagttcaaattttgtttcggatgatgcggaa
gaggctcgtcacttgcaaataaggaacgagaccagtgttgaagcagaaagtgaaacaaaa
cttacagttcccaagaattgttctgaaaatccaagtgctttaaattcttacgataaggaa
atatccggttcgtcatgtaaacaaacggattcggccatcgttcatccgccatctggtgac
gccagttcttgcaaagagattatacatgtcggagggagtttaataagccttcttcgtgaa
gatgtcaagcctgtcagtattgagaaaccttctgttgaggtaaatgtctttcctaatcaa
gaaggatatctcaaaccatcagaagataatggtagtgcaaaagaatccaatgatgatgaa
aataggtctttcatagacgcctcggaccgtcatgccgttccggaacagacttccactttt
gaaacttcaactcaacaatccttttcacataatcaagagcttccaaaatttggtggttct
tcaccaactgttgggttagatcctatacaacttaaatccccaaccgcagtagagtcggcc
cctatttccgatgatcctgtttctagcgaccacttttctccatcaacctcagaaatcgtt
acccctaacctagtgccgtcagcggaatgtatacctagtgctatagaggaagtggaagaa
aaaaaacaaattgccgaatccctttcagtgccggcgtgttctactttggtacaaaaggat
tcgtctgaaattgaagaatctcacccagaacaaataatagaacttaaaaccgaacctcta
gaaaatataaattcgaatgtaataataaatgcgaatactactgaggcagaaagccagctt
acgattcaaacccctcgtgaatctcctgcccaatctgggatcaaccatgaaaaagtgatt
ccggtggttgaccgttccacaccatgtgatgaaaacattaaatggaaagtggaccagaca
tccaagtccagcgatgtgcctaatgttttaaaagatagcatcattgaagaatctggaccg
cttgacatcggcgaagctagtgcaatacagtcagcagaatcttttctccctggctctggg
ccattgagtgaaaaaaccccaactgttgctgttgtagattgtacaaaagacagtgatcct
ccgtctgtattctgtagtttacaagaaaagcctcagtgttctgaaagtgatcccatcatt
gaggatacaaacccccttatgttaaaagaggaaaataactacttatcacctggaaatgaa
agtgaagaaacaaaggaagctcaagccgttatctccagtcttagtgatgtgccggtgccc
caaacgaacgacttgactaatgctttacaagccgttggcaccatgtctgccccagtgccc
gatattgaagaagattccgaaacgcggacttgtcccgataccgtaaatcaatccggttcg
gaagaatgtgtagtgagtgttgtaagaacaagccccgaacctccaccagatgaggttgat
accttgtcggtttttaagttgtctgaagttaattatgtaaaccctgaaaatccacaagat
gcggataagctaagcaacagcaccgtgcaagatctagcagggggaaagaaaattctacgt
ataatggaggacaagttgcatccggttgaaaatgaaccttccaccaattgggtagaaaat
gctgcagataacgaagaactcgcagaaaccgagtgtttaagtaactctgaggagaaaggg
gaaaaagatccggaaaatttaaagagcaaacaatcattagaagacttacaacaaggaaat
gaattgacgaatactacggatacacttgacaaaaaaatttctgcggacgaatcaaaggtt
attggtgaaataccaaatctctctgcagaaaaaagcctgttttcaactgaaaaaggacag
gaattcttagttttacaaaagaacgtgttgaaagaagtgcagcccaagaaaattttggaa
tcagaggagaaagaaagcataccattagcgtcgagaaaagacgaaataccaccagttcaa
cacgaatttgaatcaaacgcaacttcacaagacataacattgaatcaaggagatgcgccg
aaagtagaagaaaacaatcaagcaaataccctaggtgaagactcacctggatcacagggt
gcgatcgagccagactccagcctggaaattgaatcaagtgcgatttcggaggacatagag
ccgaaacaggctgatgagactaaggcaaaagaaaattcggtagcaactgcactagctata
gtcccatccggaccagaggttgcggaagaaccagaaccagaacctaacctaaaacttgaa
ccaaacgtgatttcgcaggacatagggtataaacaggctgttaaggctaaagcagaagaa
gactcagttgcaactgccctagctaagagcccatccggatcagaggttgcggaagaacca
gaccccaacctagaacttgaatcaaacgcaatttcgcagagcatagagcttaaacagaat
gatgagtccaagacggaagaagactcagtagcaactgccctagctaaggtcccattcgga
ccagaggttgcggaagaagcagaccccaaactggaacttgaagcaaacatgatttcgaag
aacatagagcctaaacaggctgatgagtccaaggcggaaaaagactcagtagtaactgcc
ctagataaggccccatccggacctgaggttgcgaaagaaaaaaaccccatacttgaactt
gaagcaaaagcaatttcgcagaacatagagtctaaacagactgatgagtccaaggtggaa
aaagactcagttgcaactgccctagctaagagcccatccggaccagaggttgcggaagta
acagaccccaaactggaacttgaagcaaacgcgatttcgcagaacatagagcctaaacag
gctgatgagtccaaggtggaaaaagactcagtagcaactaccctagctaaggtctcatcc
ggaccagaggttgcggaagaaaaagaccccaacctggaactggaatcaaatgcgatttct
cagaacatagagcctaaacaggctgataaatacaaggcagaagaagactcagtagcaact
gccctacctatgttcccatcccgaccagatgttgcggaagaacctaactccaacctggaa
cttgaatcaaacgcgatttcgcaggacatagagcctaaacagaatgatgaacctaaaaca
gaagaagactcggtagcaactgccctagctaagtccccaaccggaccagaggttgctgaa
aaaccagaccccaacctggaatcaaatgcgatttcacaggacatagagcctaaaacagaa
aaagactcagtggcaactgccctagctgagatcgcatccgaaccaaaagttgtggacgaa
ccaatcgctagtttggatgatccaccaaaaatagaatcaattgtagtggaaaccgcaaaa
gttttaaaggaagattcagaaaaagatgcagacgtcccgacacctacagataagcatgag
gcaattttacttaagttttcagaagaagttccccctcgtacgatttccgagatcaaacaa
aagagtgaattattggagggctttgatggtaactacaaggtttcggtagatcctgtccag
aagaaattaaaagaggaaatcctcattgatgtcgtaaagcaggagttattgtcagttcaa
gaagaaccagaatcaaactcaatttctatgatttcaccaaaacgcgaactgtggcaaaca
aagtctgaaaccgttttgtcgcatgaactgcctgaaaacgaagaaatttctgttatgact
attaaggaggtccagtccgatgtgggcaatgaggttctatcagtcgcaacttctgaagtg
atgacagaaaaggaaccgtcagtagaagatcctaaaacttgctctcaaggaagtgggcta
tcgagaaaaaaggtcaggatttcgtcattcaaacaagaacttttaataccaaagagtctg
ttgaacacagaacttcagagggatgaagacatcctgagttctcaacctaaaatccctgtg
cttcttgtgaaagaggaatcgccccctatggtcccagataaaagtgcgccagacgacatt
cgttatggttgtggtagtaaaattctaactgcagtgccaaaggaaagtcagggagaagag
cgagccttagctgatgagttagaaacaattccaaggtctgcttctcctgatggaaaagaa
aaaaacctgcaaaaaacacccgcctcgtccattcccgaaaaggaagaagtcggccccatg
tccgaagttgtgcaatcggaagcaaacgatacactgcccaaagtacccacttcttctgaa
acgccagaaaatgaggaagagaagacaacaaatcttcctaatgcagaaaaatcttcgaat
ttgaatcagttaactttcgatttcgattcttccgctccagtgtcaataattttaccacct
tcaaagaagccagatacatcaaccaagcgccgtggtcggaagcgaggtagatttggtcat
gatggcaacactgacagtggtaaagaaaatgacgcccagccaacggttctgcgacagagc
tcgcgtattgcaaaattgcgggagaaagaggacgaagatcgacgcaaggaggaagcggaa
cgtttacagcggctgaaggaggaacatgagcgtcgggagaaaagacggactgcgcgtgac
gagaagatgaagaagatggaagagaaacaacaacgacgacagttgaaaactactaccagg
gaggatgtgacctacaaacaaagtgaagaggaatcttctagttctgacgaggaaaagaat
tctgaagaggaaggtcgcaagaaaaaaagcaaaaaagacaagcgaagacataggaagaag
aaaattgaccgtccgtgggattcaacggattccagtgagaaaagcagtgaaagtgatgta
gatggcttggatgatctacaggtagaagaagagaacgaagagctcgttttcaaatcggat
catgaattctcacccgagtcagatttggatggtgaagaggagatcgtgcagcctaccaaa
catgctaggactgcaagagctggcattgctcctaaaaagaggggtcgatccaagaaagtt
aaagtagaggaagagattgaagaagaagaagctgcagcaacggaagaagaagaggaagaa
gaagaagccaagtgtcacaaatgtggccaatctgatcatccagaatggattctactctgc
gaccgctgtgatggcgggtggcacgccaattgcgtcaaaccacctttgctggtcattccc
gaaggccattggttttgcccgccctgcgatcatgccacgctgttggaacgtttgcaagaa
agactcgaagcctacgaatttttgttgcaagagaaagaagcggaactcgaacggaagaaa
gagcaggaattggaggctaaacttgccaaggaagaggctgataaacaggcattgttggag
gcggaagaagaggctcaagaagacgatgaggaggacgacaaaattagcgaggctggggat
ttgggtgccgatggcgaagacgaagaaacttcagaagatagcggtgaggatgaagacgac
gaagatgacgatgatgctgagaacgatgaaagtgacgaaaatcttaacggaagaaggcaa
cgcaaagccgctaaacaagccaattattcttttaaagactttgacgatatgatcaaatct
gctttaagggatgaagatgttgaggaggaagaagaatcaggcggcaaaggtaaaggcaaa
ggtccgaggtccggcgttgaaggcaatagcgatgaagatgcagataagcctcgatcacca
ccaggatcccgtccatcaggcattggcaataaaagaatttccaccagcgacgacgatagc
gacattatgccgcaagtgatccgcaagaagaaggctcgtaaacttaacgatctaagcgcc
accagtaatgaagacgattcagacgaagatttccagggctcatccgctgaaggcagcgac
agcgaggacgacgatgaagaggccagtgacagtggagacagctttgttgtggacgatgat
agtgacgattatgatgtcatccacgtcagagctaaaaagaaggcaagggtagcgtcgccc
accatccggcgctctgctaggagctcccgcaaaagaaatcttcgaatggatagcagtgat
acgagtgaagaagaaagcgaatacgaggagaagcctaccaaacgaaagaaaggcaatgaa
tcctgggattcatccggagcatcgagcagtgatgcctcgtggggtagatcaaagaaacgg
agcgcgacaaaaagtagagctaaaccagttgctgctcccaaacccaaacccaagccacct
ccccgtaaggcacctgctaatcgaggtagaggccgtggaggtcgaaccaacaaagtggaa
tcggacgatgagcctttccgctcgaatgtcagcgtaaaaaagataaaggaagcgcagcca
gtgaaggcacaagaagaggaagatagtgaccacgctcagaagcgcactactcgtgggaga
cagatcagttataaagaactgattagctcaggagacagtcaagacgaagacggcaacacc
gccaagaaaatgggaacgttatttgcagctgaccggataaggaatatgcctggcgcagcc
attagaggaggttccagccgaaggggaggtcgtgggggagtaataacacaagcacctggc
cgtgcgaatgtgtctggtgatgactgcacacctgtgcctgtcagtgtcatttcttccagg
attggtgtaactctcaaccaagacgatgaatctcgtttttccggttctactgatacgatc
gaattcagtagtgcggtggcatctgccacagccgccgcatccgcctacacgaccggggac
gagagtcacacttccactgacatcgttacgcctagcatagatccggatttgtctaccttg
cccttagttctgcctcaggaagacgaagcaagtcccataatcaaagatgagcttccagct
attgttcctgtccctgttctgtcacaggaccttcaagtttcgaggttaattcagcagcga
ccagtcgacgttccacctacattaccgcccgacttgcagatcaatcgtctcatcaattct
cataccatttcaagcagtagcaacagcccggcgagacagagtccaggaattctaccacaa
cagcgactgctccgagacgttctggacagccaaacaccgccacccgccgtccagctatct
ccaatattaccgacgccgccgccgccaatcattgcgcctagtgtcgaatctcccctatac
agccatagcggagtcatcaaacagacgaggcattcgctacctccaacgcctccgctttat
tccagtccccatgtcgtcaaaactagcgatttgattgcttcgtcgacaccaccatctgtc
attaggccttatcccacgactgcaacagcgtctccgttaagcccaagtattagcggaagc
tcaacacctggtaaccctctcagtattcaaggactgctaggaaccggtcacggttctcct
ggttcgaatccttcggcaccaccatcttcgcatcccagtggccatttgcggccgtatggc
aacacgccgcacatgataggccacggacctttcctcaaccacacgccttacgcaaaccct
tacagtacagcgccgccttccagaactagttatatgggaacgccagtcacgcccacgccc
cgtcaggcatacccgccaatgtactcgtcaccgcacctgccaccgcacggcctgccactg
cattcaccttatcaacatcatggctcacctctgagaccgacttccagctaccagcatgcc
ggtttcccgcaggcatttgcggccgcagctgcagcagccgccagtgccgaagaagagcgt
agaatttatagagttgcagctcaggcgtctagggaatctggagcggataactacgaacca
gcagcaagcgctgggctgttgttgaaaagcggtgccgaagatcctgcgcccgcaaccgca
gtgcctcccgaaagtgaatttggtggactggtgtcttacttctcaagccagcaggaagat
ttcgaagaatcatga
DBGET
integrated database retrieval system
