Daphnia magna (water flea): 116923774
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Entry
116923774 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: centaurin-gamma-1A
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116923774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116923774
Membrane trafficking [BR:
dmk04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
116923774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
Ank
PH
Ank_3
Ank_4
PH_11
Ank_5
Roc
PH_6
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
116923774
NCBI-ProteinID:
XP_045029649
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Position
LG5:10217836..10247416
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AA seq
964 aa
AA seq
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MSKETTLTRMSINRPLTQVQPYWNNSTAIRQEIQRFESVHPSIYAIYDLIESIPDPILGQ
QIRDNVVCIEDSFVNSQEWTLSRAVPDLRLGIVGSLASGKSALVHRYLTGSYMQEESPEG
GRFKKEISIDSQSYLLLIRDEGGSPEHQFTAWVDAVIFVFSLESEASFNAIYNYHDKMAQ
YRNAAEIPFILVGTQDGINEANPRVVDEARARNLAAVLRRCSYYETCATYGLNIERVFQD
ACQKIVQQRLNPLGAPSAGVVSAAAAQRPTTPNHYSLGRHYNQQQQQHATGSTTSITTGG
GVSGPTGVAGSATPRRTNSNHNMTGNNSASSSGNSSTSNNSNNNAAANNTLVSSGSTSSS
VAVAPPAEKHLNAMGPTTQSSQSGNALGSAESLALLRSTPPSTIDTLSVPGKDKDGKDLP
TPSSTPTTSRKSRRRSNLFTPSSSKKEDKDKSEKDKAKNSNGGGELGSGRAIPIKQGYLY
KRSHNALNKDWKKKYVTLGDDGKLTYHSSLHDYMDDSHGKEISLQYVTVKVPGQKPRGSR
GTQLQQQPTPGVALTPGLVPGANGVLNEPITTGFPGNKDKRTEKNTVMLTAYEVLKDPVS
RMLMGSGNGGDDPSSQNAINGGIADNSAKTETPSVKKRHRRMKSSSNKANDLDDCDGYEF
QIVSLDNKIWHFEAASVEEREEWVTAIEHQILSSLQGNESSKSKSRMNSLVDAASIQSLR
STVIGNANCADCDAPNPDWASLNLGVLVCIECSGIHRNLGSHISRVRSLDLDEWPPGHIA
VMLGLGNTLSNSIWEARIRGVKPGPQSSRDDKERWIRAKYEHKEFLALPSSSGSLGQQLI
DAVCRSDLKTVALLLARAGPEDVNCSVAVRDLRTPLHLAATLGNLALVQLLLWHNANVKA
LDQEGRTCLTFARVSNSPDVIELLIANGCPEGPSSISSFSTLNRRKTINLTSTTNLMGKA
EQGL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagaaaccactttgacgagaatgagcatcaatcgtcccctgactcaggttcaa
ccatattggaacaactcaacggccatcaggcaggagattcagcgctttgagagtgtccat
ccttccatctatgccatctacgacctcatcgaatccataccagatcctatcctgggacag
cagattagagacaatgttgtgtgcatcgaagattcgttcgtgaatagtcaagaatggacg
ctatcgagagcggtgcccgacttgcgtttgggtatcgtcggttcgctggcgtcgggcaaa
tcggcactggtccatcgttacctcaccggctcctacatgcaggaggagtcacccgaaggc
ggtcgattcaaaaaggagatctctatcgacagccagtcttaccttctcctcatccgcgat
gaaggcggctcacccgaacatcaattcactgcctgggtggatgcggtcatcttcgtcttc
agcctggaaagcgaagccagtttcaatgccatctacaactatcacgacaaaatggcgcag
taccgcaacgccgccgagatcccgttcatcctcgtcggcactcaagatggaattaacgag
gcgaatccacgggtggtggacgaagcgagagctcgcaatctggcggccgtcctcagacgt
tgctcctactacgaaacgtgcgccacctacgggctcaacatcgagcgggtctttcaagat
gcttgccagaaaattgtgcaacaaaggctgaatccacttggggcgccatctgctggcgtc
gtgagtgcggcagcggctcaacgtccgacgacgcctaatcactactcccttggccggcac
tacaatcaacaacaacaacagcacgcgaccggcagtacgacgtccatcacgaccggtggc
ggagtctctggacccaccggcgtggccggcagcgccacgccacggcggacgaacagcaac
cacaatatgacgggcaacaacagtgcgagcagcagcggcaacagtagcaccagcaacaac
agcaacaacaacgcggccgccaataacacgctcgtttccagcggttcgacctcctcgtcc
gtcgcagtcgcacctcccgccgagaagcatctcaacgctatgggtcctacgacgcagagt
tcacaatccggcaacgccctgggatcggctgaaagtctggcgctgctccgcagcacgcca
ccgtccaccattgacacgctgtcggtgccgggcaaagataaggacggcaaagatttgccg
acgcctagttcgacgcccacgacatcgaggaaatcgcgtcggcgatcgaacttgttcacg
ccttcgtcatccaagaaggaggacaaagacaaaagcgaaaaggacaaagccaaaaatagc
aatggcggaggcgagttgggcagcggtcgagccattcccatcaaacaaggttacctgtac
aagagatcgcacaatgcgctcaacaaagattggaagaagaagtacgtcaccctgggcgac
gatggcaagctcacctatcattcgagtctacacgattacatggatgactcgcatggcaaa
gagatctcgttgcagtacgtgacggtcaaagtgcctggtcagaaacctcgtggatctcgt
ggcacgcaactgcaacaacagccgacccctggagtggcactgacacctgggctggttcca
ggtgccaacggagtcttgaacgaacccatcacgaccggatttccgggcaataaagataag
cgtacggaaaagaacacggtcatgctgacagcgtacgaagtgctgaaagacccggttagt
cgcatgctgatgggtagtggaaatggaggagatgatccatcgtcacagaacgccattaac
ggcggaatagccgacaatagtgcgaaaacggaaacgcccagtgtcaagaagagacacagg
cgcatgaagagctcgagcaacaaagccaacgatctcgatgattgcgatggatacgaattc
cagattgtttctttggacaataaaatttggcatttcgaggctgccagcgtcgaagagcgc
gaagagtgggtgactgccattgaacatcaaatactcagctcactgcagggaaatgaaagc
agcaaatccaaatcgcggatgaacagtctggtcgatgctgcctccatacaatcattaaga
tcgacagtcatcggcaacgcgaactgcgccgattgcgacgctcctaatcccgactgggct
agtttgaatctcggagttttggtgtgcatcgaatgttcgggcatccaccgcaatttgggc
tcgcacatttcccgagttcgatcgctcgatctagacgagtggccacctgggcatatcgcc
gtcatgctcggtttgggtaacacgctcagcaacagtatatgggaggcaaggataagaggc
gttaaaccaggaccgcaatcgagccgagacgataaggagcgttggattcgtgcaaagtat
gaacacaaggaatttttggctttgccttcgtcttccggctcgctcggtcaacagctgatt
gacgcagtctgccgctccgatttgaaaacggtggccttgctgctggcccgagccggacca
gaggacgtgaactgtagcgtggctgtccgtgatctgagaacgcccctccacttggccgcc
accttaggcaatttggctctagtccagcttttactctggcacaacgccaacgttaaggca
cttgaccaagaaggtcggacatgtctaacctttgcacgagtcagcaattcgcccgatgtg
attgagctgctcattgccaatgggtgcccggaaggaccgtcttcgatttccagtttcagc
actctcaaccgccgcaagaccatcaacctcacgagcaccactaatctgatgggcaaagcc
gaacagggtctttaa
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