Daphnia magna (water flea): 116923777
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Entry
116923777 CDS
T07514
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116923777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116923777
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116923777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
NID
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
116923777
NCBI-ProteinID:
XP_045029655
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All DBs
Position
LG5:complement(10282479..10294075)
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AA seq
462 aa
AA seq
DB search
MLSVGNANIFPAHFGGLSAVLAAGMPVVTGAGGQLTVGMPGSAAAAAAAAAVAAGLMPGN
EMNSPSPDMFTTVRTGMDSNSNGSAGRGMKTEVAMSGLALDQSSSSGRSTPTDLPHNKLF
VGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRVLAVPAH
TLDGKKIDPKHATPKNKGKSTPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVEEAVMLM
DQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKVECKKAQPKEAILASTTTALLAAK
RSVLLNGLGVAGLAPGVAHVQPSAASQGAAQQFLAAQAAQVQAAVAAHQQQAAQAQSAAA
AAGYGKLLASYPALASYRYSPYSLPGAAAQGNAQAAAAAAAAAAAAAASSAGHHHHHHHA
MTAASPAAQQAAAYQGYSLANVDMSSFQGVDWSQIYGMGMYV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgtaggtaatgccaacatcttcccagctcattttggtggcttgtctgctgta
ctggcagcaggtatgcccgttgtcactggagctggtggacaattgaccgtcggtatgcca
ggctcggctgctgcagccgctgctgctgccgccgttgcagctggtctcatgcccggaaac
gagatgaactcgccatctcctgacatgttcaccaccgtcagaacgggaatggatagcaat
agcaacggttctgctggccgcggcatgaaaacggaagtcgcaatgagcggactggccttg
gatcagagcagttcatccggtcgttcgactccgacggaccttccgcacaataagcttttt
gtgggcggactcagctggcaaacgtcggccgacaagctgcgcgagtactttggccagtac
ggcaccattatcgacgttcaggtcctcaaggatcctcttactcagagaagccgaggcttt
ggcttcatcacctttgccgaagcgagtagcgtggatcgcgtgctggccgtccctgcgcac
acgctcgacggcaagaagatcgacccgaaacacgcgacgcccaagaacaaaggcaaatcg
acgccttcatccaagacgaaaaaggtttttgtcggtggcgtaagtcaagacacgtcggcc
gatgaagtcaaggcctacttcaatcaatttggacgcgtcgaggaggccgtcatgctcatg
gaccagcagacgaaacgacatcgagggtttggtttcgtcacgttcgagagcgaggacgtt
gtcgatcgcatttgcgagattcattatcacacaatcaagaataagaaagtggaatgcaag
aaagcgcagcccaaagaagctattctcgcttcgaccacgacggccttgttggccgctaaa
cgtagcgtcctcctcaacggtctgggcgttgccggattggctcccggagtcgctcacgtt
cagccatcggctgccagtcagggagcagctcagcaatttttggcagcccaagcggcccaa
gtccaagcggccgttgcggcccatcaacagcaagctgctcaggcccagtctgcagctgct
gccgctggctacggcaaactattggccagttatccggcattggctagttatcgctacagt
ccttattctctgcccggcgctgccgctcagggcaatgcccaagcggcggccgcagctgca
gccgccgccgccgctgctgccgcatcctccgccggccatcatcaccatcaccaccacgct
atgacggccgcttcgcccgccgcccaacaagcggccgcctatcaaggatacagtctagcc
aatgtagatatgtccagttttcagggtgtcgactggagccaaatctacggaatgggaatg
tacgtctag
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