Daphnia magna (water flea): 116923797
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Entry
116923797 CDS
T07514
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116923797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116923797
Transporters [BR:
dmk02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116923797
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116923797
NCBI-ProteinID:
XP_032786224
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Position
LG5:complement(3443452..3453782)
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AA seq
639 aa
AA seq
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MAEMSEKSKSNKERFADEEGESNGLLPAALKTPTVTAATPAIDGHSSIIKKDNNDDANLP
ERGEWSSKIEFIFSTVGYAIGLGNVWRFPYLCYKNGGGAFLVPYLITILFAGVPMFFLEC
ALGQYLGIGGLGVWKVTPFFKGVGYAAVINAAWLNIYYIVILAWCLFYFLVSLSKVLPWG
TCDNWWNTETCVSAYSRQNLTSFIEGNTTFYNLNGTLYAASNLTDPVKEYWERRVLMISD
GLEDIGELRWELVGTLAAVWFMCYFCIWKGVKWTGKVVYFTALFPYFLLTVLLIRGVTLP
GAAEGIAFYLTPDLSRLRDPEVWIDAVSQIFFSYGLGVGSLIALGSYNQYNNNVYRQSLI
VCAINSGTSFFSGFAIFSIIGFMAKEQNKPISEVAASGPGLTFLAYPSAVLQLPISPLWS
CLFFLMFITLGLDSQFCTLEGFITAVVDEWPRLLRRRKEIFIAVVCFVSFLIGLSCVAQG
GMYVFQLFNTYACSNLVLLWLIFFECIAISWGFGVNRFYDGLKDMIGYYPTRWFKFCWCF
TTPFICVGVFIFYLAEFTPLTYLDYHYPWWGHFIGLLLALSSMICVPAYMVYTVWRQEGT
LMEKLRSTMNQIRPNITLEEIRNSHAKTLAPSSEAVTAV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatgtcggagaaatcgaagtctaacaaggagcgattcgccgatgaagaaggt
gaatccaacgggcttcttcctgctgccctcaagacgcccaccgtcaccgccgctacaccc
gccatcgatggccattcgtcgatcattaaaaaggacaacaacgacgacgctaatttaccg
gagagaggcgaatggtcttccaagattgaattcatcttctccactgttggctacgccatc
ggactaggaaacgtttggcgatttccttacctgtgttacaagaatggcggcggagctttc
ttggtgccgtatttgataacgattctcttcgccggcgtgcccatgtttttcctggaatgc
gccttgggtcagtacttgggaatcggtggactaggagtctggaaagtgacacctttcttc
aaaggagtgggctacgctgccgtcatcaacgcggcatggttgaacatttactatatcgtt
atcttggcttggtgcctcttctactttctcgtatctctcagtaaagtgcttccgtggggc
acctgcgacaattggtggaacacggaaacgtgcgtcagcgcctactcgcgccagaacctc
acctctttcattgaaggcaacacaactttctacaacctcaatggcactctatacgctgct
tctaacctgactgatccagtcaaagaatattgggaacgccgtgtcctcatgatctcggat
ggcttggaggatattggagaacttcgttgggaactggtgggaactttggctgctgtttgg
ttcatgtgctacttttgcatctggaagggagtcaaatggactggcaaggtggtttacttc
actgctctgtttccttatttccttttaacggtgttgctcatccgtggagtcactcttcct
ggtgccgcagagggaattgctttctacttgactcccgatttgtccagactacgagacccc
gaggtgtggattgacgcagtgtctcaaatcttcttctcttacggtttgggagttggttcg
cttatcgctctgggaagttacaaccaatacaacaacaacgtctaccggcaatcgttgata
gtttgtgccatcaattctggcacgagtttcttctcgggattcgccattttctccattatc
ggtttcatggcgaaagaacaaaataaaccaatcagcgaagttgcagcgtcaggtcccgga
ctgacatttttggcgtatccttcggctgttttgcagctaccgatttcccccctatggtcg
tgcctctttttcctgatgtttattacgctgggtctggattcacagttttgcactctggag
gggttcataacggcagtggtggatgaatggcctcgcttgcttcgccggcgcaaggagatt
ttcatcgccgttgtctgttttgtttccttcctcatcggactctcgtgtgttgctcaggga
ggcatgtatgtattccagcttttcaacacttatgcctgcagcaatttggtgctactgtgg
ctcatcttcttcgagtgcatcgccatttcatggggtttcggagtgaatcgcttctatgac
ggcctcaaggatatgatcggatattatcctacccgttggttcaagttttgctggtgtttc
acaactcctttcatttgcgttggtgtcttcatcttttacctggccgaattcacacctctg
acgtacctagactaccattacccttggtggggccatttcataggcttgcttctagctctt
tcctccatgatttgcgttccagcttacatggtctacactgtgtggagacaggaaggcact
ctgatggagaaacttcgaagtacgatgaatcagatcaggcccaatatcactctggaagaa
atacgtaattcgcacgcaaagactttggcaccaagtagtgaggctgtaacagccgtctag
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