Daphnia magna (water flea): 116924006
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Entry
116924006 CDS
T07514
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03250
Viral life cycle - HIV-1
dmk03272
Virion - Hepatitis viruses
dmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116924006
03272 Virion - Hepatitis viruses
116924006
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116924006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116924006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116924006
Membrane trafficking [BR:
dmk04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
116924006
Exosome [BR:
dmk04147
]
Exosomal proteins
Proteins found in most exosomes
116924006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
116924006
NCBI-ProteinID:
XP_032786423
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All DBs
Position
LG5:complement(9443384..9446959)
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AA seq
868 aa
AA seq
DB search
MEMTDILSVPLKKTSEIDLVKPLKNLIALRFSTADNPENFNDAISELNKLRSLACVRAMD
KNEAAIETVARYCDQLAALEGKIPAQDVQIPFKWKDAFDKGSLFSGKMSLTINSLSYERM
CCLFNLAAFQSQVAAVQSQESDEGLKLAAKLLQSASGVFSYLKANVMGALQQEPTPDLNP
EILATLSSLMLAEAQEIFVIKAISDKMKEAIIAKLASQCDEFYAETLKQMKHPTATSVWE
KDWISKVTGKQLAYHAIAQYYQSRVCNGKKAIGEEIARLQDAIENFKAAQQRISEATAYQ
DYVNRAQKALTEAQKDNDFIYHERVPDVKILDPVGKAPLAKTLPIPERLGASFKDLFEGL
TPVVVHQAMAAWDVRKTEIINVEVGRMREANQMLNGTLASLNLPAALEESAGESLPQSLK
DKARAVRQSGGIDIIKELIGNLPSLLERNKEILDEAERLLNEERQSDDQLKAQFKERWSR
TPSVKLTEAFTSNIAKYRQILANASNADNVVKGKFESHRRGIELLSRPEGELETAVPSAS
QSAADNSRSPAAAQLRLLMSQVNDLKSEREVLEHELKNATIDMKQQFLGALAQDGAINEP
AVSVEKLGQVYGPLQKRIRESIDFQASLIQQIQTVNEDFVKDKSDGKGPSAREELLKELA
TAHDIHMEVQNNLQEGAKFYNDLTQLLLSFQSKISDFCFARKAEKEELLKDLTSSYAGNA
SSNAPPSEVPSYHATQAREAPARPPPPNFGTSAPTSSAPAAHLTTSPSPMAPQVVPGQTG
PAPNHYLPYPIQPYGGMPMPMPMPMSYGYPSGGAPPNYDYANQAQYQQQQHQQSQQPQQQ
GAPGYPGYNAYPYPYYNPAYPYTPPRPY
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacggatatactgtccgttcccttgaaaaagacatcagaaattgatttggtg
aagccattgaagaatctgattgctttgcgattttcgacagctgacaatcccgagaatttt
aacgatgccatatcggagttgaacaaactgagaagtctcgcctgcgttcgtgctatggac
aagaacgaggcggctattgaaactgttgcaagatactgtgaccagcttgcagctctagaa
ggtaaaattcctgcacaggatgtccagattcctttcaaatggaaagatgcatttgataaa
ggatcattgttcagtggaaagatgagcctgacaatcaactcactttcttatgaacgtatg
tgttgcctattcaacctggctgcctttcagtcccaagtggcagcagtgcagagtcaagaa
agtgatgagggtttaaaacttgctgccaaactgttacaatcagctagtggggttttttca
tacctcaaagcaaatgttatgggtgctcttcagcaagaaccaaccccagatctaaatcca
gagatacttgctactctttcatctttgatgttggcagaagcacaggaaatctttgtcatt
aaggctataagtgataaaatgaaagaagccatcattgccaaattggcatcgcagtgtgac
gagttttatgctgaaacactgaaacagatgaaacatccgacagccacctcggtctgggaa
aaagactggatttcgaaagtgacaggaaaacagttggcctatcatgcaatcgcacaatat
taccagagtcgtgtttgcaatgggaaaaaagctataggagaggaaatagcacgtctacag
gacgctattgagaatttcaaagcagcccagcaacgcatcagtgaagcgactgcctatcaa
gactatgtaaatagagcccagaaggcacttacagaagcgcaaaaagataatgacttcatc
taccacgaacgtgtacccgatgtaaaaattcttgatcctgtcggaaaagcgccactggct
aaaactcttcctattccggaacgtcttggcgcaagcttcaaagatttattcgagggttta
acaccggtagtggtccaccaagcaatggccgcttgggatgtccgaaaaacggaaattatc
aacgtcgaagtaggccgcatgcgggaagcgaaccagatgctcaatggtacattggcctct
ctgaacctgccggccgcgctggaagagtcggctggtgaatcgcttcctcagtccctcaag
gataaagcacgggcagtccggcagtccggaggtatcgacattattaaggaattgattggc
aatctcccttcgctgctggagcgtaacaaagagatacttgatgaagccgagcggctatta
aatgaagaacgacaatcggatgaccaactcaaagcgcaatttaaagaaagatggagccgg
acgccatcagtcaagttgactgaggcgtttacgtcaaatatcgctaagtacagacaaatt
ttggcaaacgcttccaatgccgacaatgtggtcaaagggaagtttgaaagccatagaaga
ggtattgaactactgagtagacctgaaggcgagctagagactgctgtgccatctgcttct
caatcagcggcagataatagccgctcaccggctgctgcccagctcagactcttgatgagt
caagtgaacgatttgaaaagtgaaagggaggttttggaacatgaattaaagaacgccacg
attgacatgaaacagcaattcctcggtgctttggctcaggatggagccataaacgagcca
gccgtttcggtggagaagcttggtcaagtctatggtccattacagaaacgtatccgagaa
agcattgactttcaagcaagtctcattcaacaaatacagacggtgaatgaagatttcgtt
aaggataagtcggacggaaagggtccttctgcccgtgaagagctccttaaagaactagcc
acggcgcacgatatccatatggaagtgcagaataaccttcaagaaggcgccaagttttac
aacgatttaactcagcttctacttagctttcagagtaaaatttcggacttctgttttgcg
cgtaaagcagaaaaagaagaactgctgaaagatcttacatcatcatatgcgggtaatgcc
agttctaatgccccaccttctgaagttcctagctaccatgcaactcaagctcgtgaagca
ccagctaggcctcctcctcctaactttggaacaagtgctccaacaagcagtgccccagcc
gctcatttaacgacatcgccatcccctatggctccacaagtggttcctggccaaaccggt
ccagctccaaaccattatcttccctacccaatccaaccttatggtggaatgcccatgcca
atgcccatgcccatgtcatacggttatccttcaggtggtgcccctccgaactatgattac
gccaatcaagcacagtatcagcagcaacaacatcaacaatcgcaacagccacagcaacaa
ggagcacctggctatccaggttataacgcctacccatatccatattataaccccgcttac
ccttacacgcctccccgaccttattga
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