KEGG   Daphnia magna (water flea): 116924222
Entry
116924222         CDS       T07514                                 
Name
(RefSeq) probable tyrosyl-DNA phosphodiesterase
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116924222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dmk03400]
    116924222
DNA repair and recombination proteins [BR:dmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116924222
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH
Other DBs
NCBI-GeneID: 116924222
NCBI-ProteinID: XP_032786609
LinkDB
Position
LG6:complement(9507524..9510316)
AA seq 580 aa
MDMKECTYGSKCYRRNKQHFLGFSHPYIENVASRINNGEIEAVMSLGLTPDLVEKAQVVA
ELMESGELIPKEQQMLETSVYNRTRGVKRNASEMTQKKASQEAEVNHLEHKEKQLKIKAP
SADGKTFATFKALEENQPQESVGKELNPQQKVEASAPLHYFLSAVANEPETWNQPLTLRF
ADLFHPSLGLLQQSMQMNFMVELGWLLAQYCQHKVQRKPLLVIYGVESKELSEAGSRVPT
INTIRVKPKYPFGSHHTKMSMMSYEDGSLRIVVHTGNLIESDWEDRTQGIWVSPSCPPLL
SEAAENTGDGDSVTGFKRDLLRYLETYSLVALQPWMEKIRKADMSHINVCFIPSSPGSYP
IHPGANERVPRWGHLHLSWLLQQHSSSEPDDTVIMQCSSIGSLGPSPSSWLVGELAVSMA
ASSSTAKLGQQTVQVVYPCAQDVKASIHGMAGGGCLPYTRQGHSKQTWFTGFLYKWRSES
RLRTRAMPHIKSYARVSSDMTRASFFLLTSANVSKAAWGMRSNKCATLMIQSFEAGVLFL
PKFIFGGRSFELGRQIILPYDLPLTKYGDGDEPWFIDNMR
NT seq 1743 nt   +upstreamnt  +downstreamnt
atggatatgaaagagtgtacgtatggttcaaaatgttatcggcgaaataaacaacatttc
cttgggttctctcacccttatattgaaaatgtagcttcaagaatcaacaatggagaaatt
gaagctgtaatgtcacttgggttgacaccagatcttgttgaaaaagcacaagttgtagct
gagcttatggaaagcggggaattaatccctaaagaacaacaaatgcttgaaacctctgtt
tacaatagaacacgaggagtcaaacgcaatgcttctgaaatgacgcaaaaaaaagctagc
caagaggcagaagtaaatcacttagaacataaagaaaaacagctgaaaatcaaagcacca
tctgcagatgggaaaacttttgccacctttaaggctttagaggaaaatcaaccacaggaa
agtgttgggaaagaactcaaccctcaacaaaaggttgaagcttctgctccccttcattat
tttctgagtgcagtggcaaatgaaccagagacttggaaccagcctctcacccttagattt
gcagacttgttccatccatctctaggattgttgcagcagtcaatgcaaatgaatttcatg
gtagaacttggttggctacttgcccaatattgtcaacacaaagtccagagaaagccgctg
ttggtgatatatggggtagaatccaaagaactgtcagaagctggaagtcgtgtaccaacc
atcaacaccatccgcgtgaaacctaaatatccatttggtagtcatcacacaaaaatgtcc
atgatgtcctacgaagacggatctttgcgaattgttgttcatactggtaacctcatcgaa
tctgattgggaggaccgaacacaaggaatttgggttagtccttcctgcccgccattatta
tccgaagccgctgagaacacgggagatggagattctgttaccggttttaaacgcgacctt
cttcgctatttagaaacctattcccttgtcgctttacagccctggatggaaaaaattcgg
aaggctgatatgtcccacattaatgtatgctttattccttcttctcctgggtcttaccca
atccatccaggagccaatgaaagagtgcctaggtggggccatcttcacttgtcctggcta
ttgcagcagcattcctcgtctgaaccagatgatacagtcatcatgcaatgttcttcaatt
ggctcacttggtccttcacccagtagttggcttgttggtgagctggccgtgtcaatggct
gcatcctcgagtacggccaaactcggccaacaaaccgttcaagtggtttatccttgtgcc
caagacgtaaaagctagtattcacgggatggctgggggaggctgtctaccctacacccgt
caaggccatagtaaacaaacatggttcaccggattcctttacaagtggcgaagcgaaagc
aggctccgaacacgggcaatgccacatataaaatcttatgcgcgagttagcagtgatatg
accagagcttcatttttcttactcaccagcgccaatgtttcaaaagccgcatggggaatg
cggagcaacaagtgcgccaccttaatgatccagtcatttgaagctggtgtacttttccta
ccaaaatttatcttcggaggaaggagttttgaattaggtaggcaaataattcttccatac
gatttaccattgacgaaatacggcgacggagatgagccatggttcatagataatatgcgt
tga

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