Daphnia magna (water flea): 116924291
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Entry
116924291 CDS
T07514
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04145
Phagosome
dmk04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116924291
09142 Cell motility
04814 Motor proteins
116924291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116924291
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmk04812
]
116924291
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
116924291
Cytoskeleton proteins [BR:
dmk04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
116924291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Dynein_IC2
WD40
WDR55
WD40_Prp19
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
116924291
NCBI-ProteinID:
XP_045030770
LinkDB
All DBs
Position
LG6:3733453..3738400
Genome browser
AA seq
711 aa
AA seq
DB search
MADRKAELERKKAKLEELRKEKQRRQQERERQEVENSHRVLREGDQNVTMDELLKREGLK
PVSDVLSTYVPSTQEPSNQSTPDSSLVQSPLMTRKIRKKPQLTKVSVQTTDIPPKEIVTY
AKQTQTVASPERGGYYHDLWRARKAHQVDYYDEYNLNPALEWDDEFPVLTYDRTEEDDSS
LPNLDGSYASRNSVLPPGILPHGMPQVKDVKPAMTSVEEAAFKQESQHQMKPPRELSEEE
KQMILMTEDFQRFFGQSSRIVERALSEQVDIFMDYTGASETDNNIDDRSGYKIHLNRCFY
DERWSRNRCVTCMDWSPQFPELLVASYHNNEDSPHDPDGVCLVWNTRFKKSTPEYIFHCQ
SPVLSCCFARFHPNLILGGTYSGKIVLWDNRSPKRTPVQRSPLSAMAHTHPVYCLSVVGT
QNSHSLISISTDGKMCSWSLDMLAQPQETLDLQQRQSRAVAATCMAFPQPQSDINNFIVG
SEEGIIYSAGRHGPRAGIIDTYEGHQGPIRGMDCHNSQGPIDFSHLFLTSSVDWTVKLWS
LKENKPLYSFEDNGDYVYDVAWSPIHPAVFATVDGMGRLDVWNLNQDTEVPVTSINVDGN
PALNRVKWTQSGMNLTVGDDNGRIWLYEVGEQLAVPRADEWTRLVHTLQELHQNQLDEDM
EKMNFGVGSSLSSGPASASLGIGSSISQLAGTTSPPSSLGSLSSSSSAPLR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgaaaagctgaactagaaagaaaaaaggccaaactagaagaactgaggaag
gagaagcaaaggaggcaacaggaaagagaacgtcaagaggtggaaaattctcatcgagtc
cttagagaaggtgatcagaatgtcacaatggatgaacttttgaagcgggagggtttaaaa
cctgtatcagatgtgttatcgacttatgtaccgtcaacacaagaaccaagtaatcaatca
acaccagattctagtctagtccaatcaccacttatgacacgcaagatcaggaagaaaccc
cagttaaccaaagtgagtgtccaaacaactgacattccacccaaagagattgtcacatat
gccaagcaaacccaaacagttgctagcccagaaagaggaggatactaccatgatctatgg
agagcgcgcaaagcacaccaagtcgactattacgatgaatataacctcaatccggcttta
gagtgggatgatgagttcccagttctgacttatgacagaacggaggaagatgacagctca
ttacccaatttagatggcagctatgcctcgcgcaattctgttttgccacctggcatcctt
ccgcacggaatgccccaagttaaagatgtgaaaccggccatgacgtcggtagaggaagct
gcattcaaacaggaatctcaacatcaaatgaaaccccctcgagaactgagcgaagaagag
aagcagatgattctgatgacggaggattttcaaagatttttcggccaatcctctcgtatt
gttgaaagggcgctcagcgaacaggtcgacatatttatggactatacgggagcctcggaa
actgacaacaacatagatgaccgttccggctacaagattcacttgaaccgttgcttctat
gacgaacgttggtcgcgtaaccgttgcgttacctgcatggactggtcacctcagtttcca
gagctgctggtcgcgtcatatcataataacgaagattcaccgcatgatcctgatggcgtc
tgtctcgtttggaatacgcgctttaagaagtctacacccgagtatatctttcattgtcaa
tctcccgttctttcatgctgtttcgcacgattccatcctaacctaatcctgggaggcacc
tattccggaaaaattgttctctgggataaccgcagtcctaagaggacacccgtccagcgt
agtcccctctccgccatggcccacacgcacccagtctattgcttgagcgtcgtcggaacg
caaaattctcatagtttgatttcgatttctaccgacgggaaaatgtgctcgtggagcctc
gacatgctagcacaaccgcaagaaacgctggacttgcaacagcgccaaagccgcgcagtg
gcggctacctgtatggccttcccacagcctcaatccgacatcaacaactttattgttggt
agtgaggaaggcatcatttactccgccggtcgtcacgggccacgtgccggtatcattgat
acatacgaggggcaccaaggaccaatccgtggcatggattgtcacaactcacaaggacct
atcgatttttcgcatcttttcctcacgtcttcggttgactggactgtcaagctttggagt
cttaaagagaataagccattgtattcgtttgaagacaatggtgattatgtttacgacgta
gcatggtctcctatccaccccgctgtgttcgccactgtagacggtatgggtcgccttgac
gtttggaatctaaatcaggacacggaggtaccagtaactagtattaatgttgacggaaat
cccgccctcaatcgtgtcaagtggacccagtctggcatgaatcttactgttggtgatgac
aatggaagaatttggttgtatgaagttggagagcaattggctgttccgagagccgatgag
tggacccgtttggttcatacacttcaagagttgcatcagaaccagttggatgaagatatg
gaaaaaatgaatttcggagtagggagcagtctcagtagcggacctgccagtgctagccta
ggaataggaagcagcatttcgcagctagctggcaccacttctccgccgagtagcttaggg
agcttgtcttcctcttcttctgcccctctacgctag
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