Daphnia magna (water flea): 116924316
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Entry
116924316 CDS
T07514
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116924316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116924316
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
116924316
Prokaryotic type
Archaeal type
TFB
116924316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Motif
Other DBs
NCBI-GeneID:
116924316
NCBI-ProteinID:
XP_032786732
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All DBs
Position
LG1:complement(5718390..5720435)
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AA seq
319 aa
AA seq
DB search
MASNSRGDGGGIKICCSAHPDAPLIEDYRAGDQICSECGLVVGDRVIDVGSEWRTFSNEK
ANADPSRVGGAENALLNGTDLSTMIGPGTGTASFDEHGVAKYQNRRTMSSSDRALVNAFK
EISNMADRINLPRTIVDRANNLFKQVHDGKNLKGRSNDAIASACLYISCRQEGVPRTFKE
ICAVSKISKKEIGRCFKLILKALETSVDIITTADFMSRFCSNLGLPTMVQRAASHIARKA
VELDIVPGRSPISVAAAAIYMASQASDEKSKKTQKEIGDIAGVADVTIRQSYKLMYPRAA
ELFPEDFRFTTPIEQLPQL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaattctcggggtgatggaggtggtataaaaatctgttgttctgcgcatcct
gacgctccattaattgaagactatcgagcgggcgatcagatttgttcagaatgtggactt
gttgttggtgacagggtaatcgatgttggttctgagtggcgaactttcagtaatgaaaaa
gctaatgcagatccttctcgtgttggtggggctgaaaatgctctgctaaatggaacagat
ctctcaactatgattggtcctggtactggcactgcttcatttgatgagcatggtgttgca
aagtatcaaaacagacggacaatgagcagctctgatcgtgcccttgtgaatgccttcaaa
gaaatcagcaacatggcagacaggatcaacctacctaggactattgttgacagagccaac
aatctgttcaagcaggtccatgatggcaaaaatttgaaaggacgtagcaatgatgccatt
gcctctgcatgcttatatatttcatgcaggcaagaaggtgtcccgcgaacattcaaagaa
atttgcgccgtcagtaagatcagcaagaaagagattggaagatgtttcaaactgattctc
aaagcacttgaaacttcagtcgacatcatcaccaccgccgattttatgtcccgcttctgc
tcgaacctgggattaccgacgatggtacagcgagcggcatcgcatatcgctcgtaaagca
gttgagcttgatatcgtccctggtcgttcaccgatctcagtagccgctgcggccatttat
atggcttcacaggcgtcagacgaaaaatctaaaaagacgcagaaagagataggtgacata
gcaggcgtggctgacgtcacaatccgccagtcatataaactgatgtacccacgtgccgca
gagctctttcctgaagatttcagatttactacacccattgagcaactccctcaactttaa
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