Daphnia magna (water flea): 116924320
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Entry
116924320 CDS
T07514
Name
(RefSeq) sodium channel protein 60E isoform X1
KO
K21862
voltage-gated cation channel
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116924320
Transporters [BR:
dmk02000
]
Other transporters
Pores ion channels [TC:
1
]
116924320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
116924320
NCBI-ProteinID:
XP_045030729
LinkDB
All DBs
Position
LG6:complement(10209840..10236227)
Genome browser
AA seq
2417 aa
AA seq
DB search
MPVVAPPPPAAAVTGRRTCSFEEPASDRHHLKPSSGGGGGGDVRTRSPSVAGRVSVCDVV
ANSSATGQSGEPANRNRMPSGGGGGVGCVSVGGSVGGTTGAGGLRQSRQQSVESRGSSSI
PTATLLAGHHRQVVAGGASGGGGGGSSSNGNSISKTGPIEDGAPLPAAFEPVPLNLYGKP
LQEIDPTVRDKTFVVVSNRFRKNYIHRFSASRSCFLFSPWNPLRRIAIYLSTHPYFDYVV
MTTILLNCIFLAMTEPVEQAEYVFLGIYSCEMVIKAVAKGLVLDRLTYLRSPWNWLDFVV
ILSGYATLAVEIGNLAGLRTFRVLRALKTVSIIPGLRTIINALLKAMRQLMEVMMLIVFC
LSVLALFALQVFMGELRNKCIRHWDPNATQLNWHTWIREEENWLREETGSFRLCGNLTGT
WHCPSDHVCLPGLGNNPNFGYTNFDTFPWSMLTTFQLITLDYWENIYNMVLAVCGPYTIV
FFMIVVFFGAFYLINLMLAVVAMSYDDEAGSNNQEKIKTLTDYREESTFSFDPGKLPLVL
LEKGHHADQARQKKARMDARMLANRNHLSGISGMMDEDDQSPPRQHPHVADLVWALAKSE
AAKLEAAKREVSCHKLDAASGDGPPLVISVHQTATTPPPPPLMEVAKVKTTPNERRRRPA
VVTTVAKEEEEEEPMSFNLDMTQFNCPPPQQQQQQQQQNCVYDAANVNPIKHCDIDPLAD
GCVLFQSTHFASSFNTDVGYSSETSRAPSYPSSVVFKRRTYTTNKSISQNYSSLTESIGS
QPACDLATLEGGLMERSGRSPATTDKAASLPSNGSDPRRLSYKRACDPDKRFSLGFDSMT
RLSACDSAHDLSVNSAGVLIGGSQQQVLTAAKVDDSKRKGKEERRLQKSRQPSNDPSCSS
STSSGRHHHHQHGTEATETDDRWLKRRQSYQKSSKGNHNHRMNHLGHQEAPPIGEQNGAR
PDEPAIFSLECYLTWLRTLRSILQRVIQSPWIDFVITISIVLNTAFLAAEHHGMSPDVKH
VLDVGNKVFTSVFTTECILKMGALGTDFFRNGWNVFDFVIVLASLVDLGLEIVNGLSVLR
GMRLMRVLRLAQSWTTMRVLLSIILSSLGALANLTFVLAIVVYIFAVIGMQLFGRDYTPE
NFYPDPVPRWNFKDFFHSFMMIFRILCGEWAEPLWDCMRAERKYVHGSEICFSIFLPALV
MGNFLVLNLFLALLLNSFSCEELKSRKEEINEDSKLVEGLRKIRTIAKATRTLVNLNSFE
RSESVASKRIQLASRSPSCVALAHNRLATPNANINVSPSRARSAAAGAVSLACSFDDSVS
VQLRSVYGSAEHQQQRAVWPSETKLEASGSQQPPFVVQETQKDADEVEFQEPIVHEPHHH
HHHHHHRSGADNIADWSILIPTVLEVVPPIEAAKLAREDTHSIVLSGQEEMPEEPPDCIP
SSFHDKCCCCWRNPGCSWLATPLCRRWVAGRTALLRVVKHPAFEWSILILIFGSSITLCF
EDIYLEQNPYLMNILRWTNMAFAILFALEMIIKWFALGLKYYFSSVWTALDFVIVTVSVI
SVAVEDSANLSALRSLRTLRALRPLRAISRWQGMKIVVNALMFAIPAIFNVLLVCLVFWL
VFSILGVQLFGGKFYKCIDDETGERYSPQLIDTKVDCLSRNLTWTNSPIHFDHVGHAYLA
LFQVATFEGWMEIMADAVDVRGVDLQPSYEANLWAYLYFVVFIVCGAFFTLNLFIGVIID
NFNMLKKRYEGGVLEMFLTESQKHYYTAMKKLGRKKPRKMIRRPMNPYLALFYDIAMSRR
FEIAIFIMIFLNMVVMGVEHYGQPPVFTFILELCNALFTTMFALEAVVKMIGLRHHYFTL
PWNLFDLCLVSCSVVGLIMEDVLNEFPISPTLLRVVRVFRLGRVLRLVKAAKGIRKLLFA
LIVSLPALFNIGALLALITFIYAIIGMALFGHVTHSGAINEMVNFETFGRSMLLLFRLMT
GAGWNDILNPLLIQPPYCDITYHNLPYGNCGSPILATLYLVSFIVLSSMIVINMYIAVLL
ENFNQAHHEEELGLGEEDLERFYAKWSRFDPYATQFIAFGELSDFVASLDPPLGISRPNM
AALVNLDILIASGDRLHCLDILHALTRRVLGDVEDTEHFRKLQEQMDEKFKKQFPNRREL
EIVSSTAKWKQRDTAARVIQRAYQLFLRRKLLARKRMEEMRGHVQTQTSFSIDSTDSSFA
YEPDRLSLRSVLNRMSSLFHTYLGGGGLSRQSSSRYGDSPSPIGSVASGGGQASRQNSTR
RRLGSGAHPPKSRPHSTLLDVLVPGSRRSSIWSLGTMVVSAQVHNECSNGQNHQPQSNGQ
TTSCGNRRASLAMAASPPDNHADGGMTLRHGEVFPPQSSSSSSTTGDNGGPFLSPPQQRS
DVIVKLTAASLDSDLNM
NT seq
7254 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgttgcccctccaccaccagcagcagcagtgacaggacgacgaacttgcagt
ttcgaagagccggccagtgatcgtcatcatttgaaaccgtcgtctggcggtggcggcggc
ggtgatgtgcgtacgagatctccgtcggtggctggccgggtcagtgtctgtgatgtggtg
gctaatagcagtgcgacgggccaaagtggtgagccggccaaccgaaatcgaatgccaagt
ggaggtggtggtggtgttggttgcgttagcgtcggcggcagtgtaggaggaacaacagga
gccggcggattgcgacagtctcgccagcagagcgtggaatcgcgtggcagcagttcgata
ccgacggccaccctattggctggccaccatcgccaggtcgttgcaggaggtgctagtgga
ggtggtggagggggtagtagcagtaacggcaatagcatcagcaaaacggggccgatcgaa
gacggagccccgctaccggccgccttcgagcccgtgccgctcaatttgtacggcaaacct
ctgcaggaaatcgatcccaccgtccgagacaagacgttcgtggtggtgtctaatcgattc
cgcaagaattacatccaccgcttttcagcttcgcgttcgtgtttcttgttttcgccgtgg
aatccgctgcgacgcatcgccatctacttgtcgacgcatccgtattttgactacgtcgtc
atgacgaccatcctgctcaactgcatcttcctcgccatgacggaacccgtcgaacaggcc
gagtacgtgttcctcggcatttactcgtgcgaaatggtgatcaaagccgtagccaaaggc
ctcgttctggaccgtctgacgtatttgcgcagcccttggaattggctggactttgtcgtc
attctgtccggctacgccacattggccgtcgagatcggcaatctcgccggattgcgaacc
ttccgcgtactccgcgcactcaaaaccgtttccatcatcccaggtttacgcaccatcatc
aacgctttgctcaaagccatgcgccagttaatggaagtcatgatgctgatcgtcttttgc
ctcagcgtcctggccctcttcgccctgcaagtgtttatgggcgagttacgaaacaaatgc
atccgccactgggaccccaatgccacccaactcaactggcacacatggatccgggaggaa
gaaaactggctcagggaagaaacgggcagttttcgtttgtgcggtaacctgacgggcact
tggcactgcccgagcgaccacgtctgtttgcccggcttgggcaataatcccaactttggt
tacaccaatttcgacacgtttccgtggtcgatgctgaccacttttcaactgatcacgctc
gactattgggagaacatttacaacatggtgttggccgtttgcgggccgtacacgatcgtc
ttcttcatgattgtcgtcttttttggcgccttttacctcatcaacctgatgctggccgtc
gtcgccatgagctacgacgatgaagcgggatccaacaatcaggagaaaatcaagacgctg
accgactaccgagaagagtcgacgttcagcttcgatccgggcaagttgccgctcgtcttg
ctcgaaaagggacaccacgcggaccaggcgcgacaaaagaaagccaggatggatgccagg
atgctggccaatcggaatcatctgtcgggcatctccggcatgatggatgaagacgaccaa
tcgcctccccgacaacatcctcacgtggccgacttggtctgggccttggccaaaagcgaa
gctgccaaattggaagccgccaaacgggaagtgtcttgccataaattggacgcagcatca
ggtgatggccctccgctcgtcatctcggtccatcagaccgcaacgacgccgccgccgccg
ccgctcatggaggtggccaaggtcaaaacgacacccaacgagcggcggcggcggcctgca
gtcgtgacgacggtagccaaagaagaagaagaagaagaaccgatgagtttcaacctggac
atgacccaattcaactgtccccctcctcaacaacaacaacaacaacaacaacaaaattgc
gtttacgacgcggccaatgtgaacccgatcaaacattgcgacattgaccctttagcggat
ggctgcgtcctgttccagtcgacccatttcgccagctcgttcaacacggacgtcggctac
tcgtcagagacgtcacgggcgcccagctacccgagctcggtcgtctttaagcggcgcacc
tacacgaccaacaagagcatttcgcaaaactattcgagcttgacggagagcatcggcagt
cagccggcctgcgacctggccacgctcgaaggcggcctcatggagcgcagtggccgatcg
ccggcgacgacagataaagcggcgtcgttgcctagcaacggctccgatcctcgtcgcctt
tcctacaaacgggcgtgtgatcccgacaagagattctcgttgggtttcgactcgatgacg
aggctgtcggcgtgcgattcggcccacgatttgagcgtcaacagcgccggtgttttgatc
ggaggcagccagcagcaggtgctgacggctgccaaagtggacgattcgaaacgcaagggc
aaagaggagagacgcttgcaaaagtcgagacagccgagcaacgatccgtcgtgttcgtct
tcgacgtcgtcaggccgccaccaccaccaccagcacgggacggaggcaacggagacggac
gatcgatggctgaagcgcagacaaagttatcagaaatcatcgaaaggcaatcacaatcac
cggatgaatcatcttggccatcaggaggcgccgccaatcggtgagcagaacggcgcacgt
ccagacgagccggccatcttcagtttggaatgttacctgacctggttgcgaaccttgcgc
tccattctgcagcgcgtcattcagagcccctggatcgactttgtcatcacgatcagtatc
gttttgaacacggccttcctggcggccgagcatcacggcatgagtcccgacgtcaaacac
gtcctcgacgtgggcaacaaggttttcacttcggttttcacgaccgagtgtatactcaag
atgggcgccctgggcacggatttcttccgcaacggctggaatgtctttgactttgtgatc
gtccttgcctcgctcgttgatcttggcctggaaattgttaacggcctttctgtcctgcgt
ggcatgcgattgatgcgagtgctgcgtttggctcaatcgtggaccacaatgagagtcttg
ctctccatcatcctgtcgtcactgggagccctggccaatttgacttttgtattggccatc
gtcgtctacatttttgccgtcattgggatgcaactcttcggacgcgactacacgccagag
aatttctaccccgatcccgttccgcgttggaatttcaaggatttcttccattcgttcatg
atgatcttccgcatcctttgcggggaatgggccgaaccgctctgggattgcatgcgagcc
gagagaaaatatgtacatggctctgagatttgcttctccatcttcctgccggccctagtc
atgggcaattttctggtgcttaatctcttcttggccttgttactcaacagcttcagctgc
gaggagctcaagtcacgcaaagaggaaatcaacgaagattccaaactggtcgaaggactg
agaaagatccgcacgatcgccaaagccactcggacgctggtcaatttgaactcgttcgaa
cgcagcgagagcgtggccagcaaacgcatccagctggccagtcggtcacccagctgcgtc
gccctggcccacaataggctggccacccccaatgccaacatcaacgtttcgccgtcgaga
gctcgaagcgcggccgcaggagccgtcagtctggcttgcagtttcgacgacagcgtcagt
gtccagctgcgatccgtctacggctctgccgagcatcaacagcaacgcgccgtttggccg
tctgaaacgaaattggaggccagcggatcgcagcagccgccgttcgttgtgcaggaaacg
cagaaagacgccgacgaggtcgagtttcaggagccgatcgttcacgaaccgcaccaccac
caccaccaccaccaccaccgtagcggtgcggataacatcgccgattggagcattttgatt
ccgaccgtcttggaggtggtgccacctatcgaagcggccaaattggcgcgagaagacacg
cattcgatcgtgttgtccggtcaggaggagatgccggaagagcctcccgactgcatcccg
tcgtcgtttcacgacaagtgctgctgctgctggcgcaatcctggctgcagttggctggcc
acaccgttgtgccgacgctgggtcgccgggcgcacggccctcctccgggtggtcaaacac
ccggccttcgagtggtcgatcctcatcctgattttcggctcgagcatcaccctttgcttc
gaggacatttatttggagcagaatccgtacttgatgaacatcttgcgctggaccaatatg
gcgttcgccattcttttcgccctcgagatgatcatcaagtggttcgcactcggtctcaag
tactacttttcatcggtgtggacggccctggatttcgtcatcgtcacggtgtcggtcatt
agcgtggctgtcgaggactcggccaacttgtcggccctcaggtcgttgaggacgttgcga
gcccttcgaccacttcgggccatttctcgatggcaaggcatgaagattgtcgtcaacgcg
ctcatgttcgccattccggccatcttcaacgtgctgctcgtctgtctcgtcttttggctc
gtcttttccatcttgggcgtgcagctgtttggcggcaagttctacaagtgcatcgatgac
gaaacaggggaacgctattcgccacaactgatcgataccaaggtggactgtttgagccgc
aacttgacgtggacaaattcgcccattcactttgaccacgtcggccacgcctatctggct
cttttccaagtggcgacgtttgagggttggatggaaatcatggcggatgcggtggacgtg
cgcggagtcgatttgcagccgtcgtacgaagccaatttgtgggcgtatctctatttcgtc
gtcttcatcgtgtgcggcgccttcttcacgctcaacctcttcatcggcgtcatcatcgac
aacttcaacatgctcaagaaacgatacgaaggcggagtgctggaaatgttcctgacggag
agccagaagcactactacacggccatgaagaagctgggacgcaagaaacctcgaaagatg
attcgacgccccatgaatccttatttggccctcttttacgacatcgccatgtcgaggcgg
ttcgagatcgccatcttcatcatgatcttcctcaacatggtcgtcatgggtgtggaacac
tacggccaaccgcccgtctttaccttcattttggagttgtgcaacgcccttttcaccacc
atgttcgccctggaggccgttgtcaagatgattggactacgtcatcattacttcacgctg
ccgtggaatttgttcgatttgtgcctggtctcgtgctcggtcgtcggcctcataatggag
gacgttctcaacgagttccccatctcgccgaccttgttgcgagtcgtccgcgtcttccgg
ctcgggcgcgttcttcgtctcgtcaaggcagccaaaggcatccgcaaacttctgtttgcc
ttgatcgtctccttaccggccttgttcaacattggcgccctgctggccctcatcaccttc
atctacgccatcataggcatggccttgtttggtcacgtcacccattcgggggccatcaac
gagatggtcaatttcgagacgttcggacgcagcatgttgctgctcttccggctgatgacg
ggcgccggatggaacgacatcctcaacccgttgctcatccagccgccctattgcgacatc
acctaccataacttgccgtacggcaactgcggcagtcccatcctggccacgctttatctc
gtctcgttcatcgtcctctcgtccatgatcgtcatcaacatgtacatcgccgtgctgttg
gagaatttcaaccaggcccatcacgaggaggagctcggattgggcgaggaggacctcgaa
cgtttctacgccaagtggtcgcgattcgatccttatgccacgcaatttatcgccttcggt
gagctgtcggatttcgtggccagtctcgatccgccgctgggcatttctcggcccaatatg
gcggcactcgtcaatttggacattttgatcgccagcggtgaccgcctccactgcctcgac
atccttcacgctctcacgcgtcgcgttctgggcgacgtcgaagacacggaacatttccgc
aagcttcaagaacaaatggacgagaaattcaaaaagcaattccccaaccgacgagaattg
gaaattgtttcgtcaacggccaaatggaaacagcgggacactgccgcccgcgtcatccaa
agggcctatcaacttttcctaagacgcaagttgctggccaggaagaggatggaagagatg
cgcggccacgttcaaacgcaaacttcgttctccatcgattcgaccgattcctcttttgcg
tacgaaccggatcgcctgtcgctgcgctccgtcctcaaccgcatgtcgagcctcttccac
acttacctgggcggaggcggactgagtcgccagagtagcagtcggtacggcgattctccc
agtcccattggatcggtcgcatccggtggcggccaagcgtcgcgccagaattccacccgt
cgtcgcttagggtccggtgctcatccgccaaagagtcgccctcacagcactttactcgac
gttttggtgcccggctccagacggtccagcatttggtcgctgggaacgatggtcgtctct
gcgcaggttcacaacgaatgttcaaatggtcaaaatcaccagccgcagagcaacggccag
acgacgagttgcggcaaccggcgcgcttcgttggcgatggcagccagtccgcccgacaat
cacgcagacggtggcatgacgttgcgccacggcgaagtctttccacctcagtcgtcgtct
tcgtcgtcgacgactggcgacaatggcgggccgttcctatcgcccccacagcagcgatct
gatgtgatagtgaaattaacagccgccagtttagattccgatttgaatatgtaa
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integrated database retrieval system
