Daphnia magna (water flea): 116924321
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Entry
116924321 CDS
T07514
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03022
Basal transcription factors
dmk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116924321
09124 Replication and repair
03420 Nucleotide excision repair
116924321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116924321
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116924321
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116924321
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116924321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_2
zf-UDP
zf-C3HC4_3
zf-C3HC4_2
TRAF3_RING
zf-RING_4
zf-P11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
116924321
NCBI-ProteinID:
XP_032786735
LinkDB
All DBs
Position
LG6:complement(10202459..10203837)
Genome browser
AA seq
344 aa
AA seq
DB search
MDDYQTCPKCKTTKYRNPAMVLMVNACGHALCESCVELLFAKGSGACPECKCPLRRNNFR
VQLFEDPAVDKEVDIRKRILKEFNKRQEDFPTLREYNDYLEEVETIIFNLVFDIDPTNTN
KMIDNYKKENKDITQKNRNRQSQEEMELEELLEAEKAQQSEKANLYVNAELEEKKQKHKA
REKLIDELMFSDADAKSIVASHVQATAALAKEQPKAAAQPSSGVVKSSKFSSGIQIGLRG
QHTNSFLPIPKQEDLPLYRYTAPVFDYDGPPPPPIEKLGKLNYFANIRAANIAERAGGYT
EAMSCCRALQEALGGLFYSPQLTHKTAVLATNSSTQDTDDMETT
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaaacgtgcccaaaatgcaagacaaccaaataccggaatcccgccatg
gtcctgatggtgaatgcctgtggccatgcactctgcgagtcttgcgtggaacttctcttc
gccaaaggctctggagcttgcccggaatgcaagtgtccactcagaaggaacaattttaga
gttcagctctttgaggatcccgctgttgataaagaggttgatatccgaaagaggattctt
aaagagttcaacaaacgacaggaagatttccccacattacgagagtacaatgattatctc
gaagaggtagagacaatcatcttcaatttggtttttgatatagacccaacgaataccaat
aagatgattgacaactacaagaaagaaaacaaggacataactcaaaagaatcgaaacagg
caaagccaagaagagatggagttggaagagcttttggaagccgaaaaggcccaacaatct
gaaaaggcaaatttatacgtcaatgccgaacttgaagaaaagaaacaaaagcacaaggct
cgagaaaaactcatcgacgagctgatgttctctgatgcagatgcaaagtccatcgtagcc
tcccacgttcaagctacggctgccttagccaaagagcaacccaaagcagctgcccagcct
agttctggggttgtcaagtcgagcaaattctcatccggaatacagattggccttcgtggg
caacacacgaattcgttccttcccattcctaaacaagaagatttgccactctatcgttac
acggctcccgttttcgactacgacggacccccacctccgcctatcgagaagcttggcaaa
ttgaattatttcgccaatatccgagctgccaacatcgctgaaagagccggtggctacaca
gaagcaatgtcttgctgtcgggccctgcaagaggcattggggggattgttttatagcccg
caattgacgcacaagacagccgtactagctaccaattcttcgactcaagataccgacgac
atggagacaacataa
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