Daphnia magna (water flea): 116924528
Help
Entry
116924528 CDS
T07514
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116924528
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
116924528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
116924528
NCBI-ProteinID:
XP_045030977
LinkDB
All DBs
Position
LG6:complement(7597822..7603269)
Genome browser
AA seq
1389 aa
AA seq
DB search
MTVEGSKVQALVSDALKVDAIEEAFNDFLVQRKDEGIKYSALEKEIIAVINDPQGESQDT
VLPQLVAVISSVSSDSHSKLLFKLLESVVNANIATARKVCDTLLVNEKLTPANPLLWQGS
FYLIKKIVCHVDYKGVREIMKTCLEKAQLLPSRFSTSEYPNVTALELTLKHILDRQVCLL
PAYFIVNEIRKMYPENKDWPHWKLAGLLSEVVDSFRPLVQMLSPIGRPLMFPVVDPSAHG
VHHSWKLEQGTLKLALKGNLPYEKEYTEPQTRLIRYVLEQPYSREVLCGMLGLQKQHKQR
HAVLEEQLVELLVQAMERAENTPEQDSDAADELGVSHWLWHHLSSQIIYFVLFQFASFSH
LVTLLHEKLAERKLRKGRDQLMWVLLQYISGSIQKNPLAEFLPLLRLYDLLYPEREPLPV
PDYTRPICVHQMAVACIWIHIVKKAQTEQQNAQKEIAAASAAAAGPGGIAPSPATAAGGK
TDSRAFTTLLQRHFPQALKNHQEFLQHNALNPPSSAPSGDYRVALLCNAFSTTLDCLARP
MGSLMESLHGNLSQKGSGNAGGGAGGMPNTGPISPIPLAFLDALTVHAKMSLIHSIVTHV
IKCAQTKMNVPLAPALVETYSRLLVYTEIESLGIKGFITQVMTSVSKSQAWGIFHTLVEM
FTFRVHHMQPQYRIQLLTLLHSCAVPQQHQTQLTLCVENAALRLIGLLGAAEMQPCYSRS
AADIKPLFSSDSEELNRALILTLARVISVAGCETQHSGWYKDLLTLIQQQTPHSWSSNTR
DCFPPPLAEFFGQAANQPVKESKQQLKQNIEEEHRKVLAMNPDDWPAHFSPQSNNPPFFL
CLLWKQLLETERINPVAYKCIERIGARGLGSHLRTFCDFLVYEFANSGKGQHVNKCIDVL
NEMVWQYNVVTIERLVLCLALRPLEGNEAQVCCFIIQLLLLKTPQFRSRVQDFVKDNSSE
HWRQNNWHEKHLAFQRKFPERFGPPESVLETIGQGGSYQSLPTYFGNVCLRFLPVFDITI
HRFTEIPPVTKSLETILEHLGCLYKFHDRPVTYLYTTLHYYERKLRDRPLLKRKLVSSIM
GSLKDVRPQGWALSEAYLSYSIRPADDLNWLPELDYYVKLVGRLVDTTAGRSPFPFPAMD
WRFNEFPNASCHALYVTAVELLALPASPAIVANALMDVVLQGYNLLPVSEATPVESWVNA
VGLLLTYLPESYWSVLYDRIVELLSGPQLSSYTYPCSPLHLFHFSTVVGQGLDAPFVLLL
AVAHAFFTHANIGQMGGLPQFVKDRLHPLIRTEEQYLWLCHLIGPTLQRFSVDKPKCVFD
LTVELYELLEQVDKNVSEIRMIDPICDLLYHIKYMFTGDQVKTEVEQVIRNLKPPLRLRL
RFISHLNPQ
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggaaggaagtaaggtgcaagcgttggtttcggatgcattgaaagttgatgca
attgaggaagctttcaatgatttcctggtccaacgtaaggatgaaggaatcaaatacagt
gctttggaaaaggagatcatagcagtgataaatgatccccaaggtgaatcacaagatact
gttttgccacaattggttgcagttatttcttctgtcagtagtgattcccattcaaagctc
ttatttaaacttctggaaagtgttgtgaatgcaaatattgcaactgcgaggaaagtatgt
gatacactcctagtcaacgaaaagttgacaccagcaaatccattgttatggcaaggtagc
ttctatctcatcaaaaagattgtatgccatgtggattataaaggagtaagagaaattatg
aaaacatgtctggaaaaggctcaactcttgcccagccgcttttctacatcagaatatcca
aatgttacagcattggaactcactttaaagcatattctagatcgtcaagtctgcctgtta
ccagcatattttattgtcaatgaaatcagaaaaatgtatccagaaaacaaagattggcct
cactggaaattggccgggcttttatccgaagtagtagatagctttcgccctttggtgcaa
atgctttctcccataggcagacctttaatgtttcctgtggttgacccttcagctcatggc
gtccaccatagttggaaacttgaacagggcacccttaaactggctttgaaaggaaatctg
ccgtatgaaaaggagtataccgaaccccagactcgcctgatacgctatgttttggagcaa
ccttattctcgtgaagtcctctgtggaatgttgggtttacaaaagcagcacaagcagaga
catgctgtattggaagaacaacttgtagaacttttggtacaagccatggaacgtgctgaa
aatacccctgaacaagattcagacgctgctgatgaattgggtgtttcacattggctctgg
catcacttgtctagccaaatcatttactttgttctcttccagtttgcctccttttctcac
ctagtcacacttttgcacgaaaaattggccgaaagaaaactacggaagggacgcgatcaa
ttgatgtgggtccttctccaatacatatcgggcagcattcagaagaatccattggctgaa
tttttgccactcttgcgcctctatgatctcctatacccagaacgggaacccttgcccgtc
cctgactacacccgacctatctgcgtgcatcagatggctgttgcatgtatatggatacat
attgtgaagaaggcccaaactgaacaacaaaatgcgcaaaaagaaattgctgctgcttct
gcggctgctgccggtcccggaggaattgctccatctcctgctaccgccgccggtgggaaa
acggattcacgagctttcacgacactgcttcagagacatttcccacaagcgctcaaaaat
catcaagaatttttacaacacaatgcacttaatcctcctagcagcgccccttctggggac
tacagggtagcactactttgcaatgccttctccacaaccttggactgtttggcccgcccc
atgggttcgttaatggaatcattgcacggcaacctcagccaaaaaggttccggcaatgca
ggaggtggtgccggtggcatgccaaacacaggacctatttctccaattcctctggccttc
ttggatgcattgactgtccatgcaaaaatgtcattgatccatagcatagtgacgcacgtt
attaagtgtgctcaaaccaaaatgaatgtaccactggctccagctctcgttgagacttac
agccgcctgcttgtctacaccgagatcgagtctctgggcatcaagggctttatcacacaa
gtgatgactagtgtatccaaatcccaagcgtggggtatcttccatacactagtagaaatg
ttcactttccgcgttcaccatatgcagccacaatatcgtatacaactgttaaccctttta
cattcctgtgccgtgccacagcaacatcaaacacagttgacgctttgtgtcgagaatgct
gctctaaggcttattggattacttggtgcagcggaaatgcagccatgttattcgcgctcg
gccgccgatattaagccgctcttctccagtgattccgaagaacttaatcgagctctcatt
ttaacccttgcccgggtcataagtgtcgctggttgtgagactcaacatagtggttggtac
aaagatcttttgacgttgatccaacaacagacacctcacagttggtcgagcaacacacgt
gattgttttcctccgccgcttgccgagttcttcggccaggcagctaaccagccagtcaaa
gaatcaaagcagcagctgaagcagaatattgaagaagagcatcgtaaggtgttagccatg
aatccagatgactggccagctcacttttctccgcaatcaaacaatcctccttttttcctg
tgtcttctttggaagcaacttcttgaaacagagcgtattaatcctgtagcctacaagtgc
atcgagcgtataggagcccggggattgggcagtcatctacgtacgttttgcgattttctg
gtatatgagtttgccaattcgggcaaaggccaacacgttaacaaatgcatagatgtactt
aacgaaatggtttggcagtataacgtcgttactatcgaacgactagtcctctgtttagca
ttacgaccgctagaaggaaatgaagctcaagtttgctgtttcatcattcagctcttgctt
ctcaagacaccgcagttccgttcacgtgttcaagatttcgtgaaggataattcgtcggag
cattggcgccaaaacaattggcatgaaaagcatttagctttccagcgaaagtttccagaa
cgttttggaccacccgagtcagtgctggaaactattgggcagggtggatcttaccaatcc
cttcctacatactttggcaatgtttgcctccgcttcctccccgttttcgacatcaccatt
catcgtttcacggagattccacccgtcaccaagtcactggaaacaatcctggaacaccta
ggctgcttgtacaaatttcacgatcgtccagtgacatatctttacaccacgttgcattac
tatgaacgcaaactgcgtgacaggccgcttctcaagcgaaaactagtttcctccatcatg
ggctctctgaaggatgtccgacctcaagggtgggctttgtctgaggcctacttaagctat
agcattcgcccggccgatgacctgaattggttgccagaattagattactacgtcaagtta
gtgggtcgtctagttgataccactgccggtagatcaccattccccttcccagccatggat
tggcggtttaatgagttccctaatgctagttgccatgctctgtatgttacagcggttgaa
ctcttggctcttcctgcttctcctgctatcgtggccaatgcattaatggatgtcgtctta
caaggctataatcttttgccagtttcggaagcgacgccagtggaatcctgggtcaatgcc
gtaggccttcttctgacatacttaccagaatcttattggtctgttttgtatgacagaatc
gtggaattgttgagtggtccacagctttcgtcctatacgtacccatgttcaccgttgcat
cttttccatttctcgacagtcgtcggccaagggcttgatgcgccattcgtccttttgcta
gctgtggcccatgcatttttcacccatgcaaatataggccagatgggtgggcttccacaa
tttgtcaaggatcgtttacatccactgatccgtaccgaggaacagtatctctggctttgc
catttgatcgggcccactttacagcgcttcagtgttgacaagcccaaatgtgtttttgat
ttgactgtggaactatacgaactccttgagcaggtagacaagaatgtgtctgaaatcagg
atgattgatcctatctgtgatcttctctaccacataaagtacatgttcactggcgatcaa
gttaaaacggaagtagaacaggtcatccggaacttaaaacctccattacgactacggctg
aggtttatcagccatttaaacccacaatag
DBGET
integrated database retrieval system
