Daphnia magna (water flea): 116924598
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Entry
116924598 CDS
T07514
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116924598
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116924598
Spliceosome [BR:
dmk03041
]
Complex C
Other components
Complex C specific factors
116924598
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
Cas3-like_C_2
nSTAND3
AAA_30
DUF6798
T2SSE
DUF815
AAA_29
Motif
Other DBs
NCBI-GeneID:
116924598
NCBI-ProteinID:
XP_032787005
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All DBs
Position
LG6:4322566..4326302
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AA seq
694 aa
AA seq
DB search
MFKFAKPTDLPDWKEERPDFNSDEVTSFIFNPHRSQSIENQRKRLPIFENRDQFLYLLET
HQFLILIGETGSGKSTQVPQYLLESGWGCDGKTVVVTQPRRVAVLSLASRVADEMGTSLG
QTVGYSIRFDEQISIKTRLKFVTDGVLLREMLTDPLLKKYCVIMVDEVHERSLNTDILLS
LLKKIAKKRPELRLIISSATLDAEELKNYFTWKNKSTIDENGSTEVQQYKKGTAAIMNVI
GRCYPVDIFYVQDPVPDYVKASVDTVIKISIHEPPGDVLVFLTGHEEVETTVRLLKEYAN
TIAESSKKDKLHVLAMHGGLSNEDQLQVFQRSPNGRRKIIVATNIAEASITIPGIVYVID
CGFVKLKWFNADTQTDALVVVPISQASAQQRAGRAGRMRPGKAYRLFTEDYFYTLNRFTP
PEVQRSNLSSAVLQLKALGVDDIIHFDFPSPPPAQHLAVALELLFALKAIDSSGCLTDPT
GLRIAEFPVEPIMAKMLISSNEFKCSAEIASIVAAMQVQALFYYPTRGQDSIKARIARRK
FEACEGDLITYLNVVTAFTKHGDCPRWCQSNYLNKKALKRVLVLRSQLIKLLQRLGIPYS
SAEGEIEPILRCIASSFFTNTAYLHPCGEYKTVLADVVLNVHPHSILYAEEKVPWVVFGE
VLQTTQLFMRDITIVDPLWLEELAPHYFQKVTER
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatttgcaaaaccgactgatttgccagattggaaagaagaaagaccagatttc
aacagtgatgaagtcactagttttattttcaaccctcatcgttcacaatccattgaaaat
cagcgtaaacgtcttcctatctttgaaaatcgtgaccaatttttatacctgcttgaaact
catcagtttctcattctcattggagaaacaggaagtggaaaaagtacacaggttcctcaa
tatcttttagagtcaggatggggatgtgatggtaaaactgtagttgtcacacagccacgg
agagtggcagttttgagccttgcttcaagagtagcagatgaaatgggtacatctctaggg
caaacagttggctattctatcagatttgatgaacagatttcaatcaaaacaaggttaaaa
tttgttactgatggtgtactcctgcgtgaaatgttgactgatcctttgctcaaaaagtat
tgtgtaattatggttgatgaagttcatgagagatctctgaatactgatatactccttagc
ctactaaaaaaaattgctaaaaaaagaccggaacttcgacttattatttcgtcggccact
ttagatgccgaagaattaaaaaattattttacatggaaaaacaaatcaacaattgatgaa
aatggatctacagaagttcaacaatataaaaagggaacggcagcaattatgaatgttatt
ggcagatgttatcctgttgacattttctatgtgcaagacccagttccagattatgtgaaa
gcaagtgtagacactgttattaaaatatcaattcatgaaccgcctggagatgtattagtc
tttctaactggccatgaagaagtggaaacgacagtgagactcctaaaagaatatgcaaat
acaattgctgagtccagtaaaaaagataaattacatgtcttagcaatgcacgggggatta
tcaaatgaagatcagttacaagtttttcaacggtctccaaatggacgcagaaaaattata
gttgcgaccaacatagccgaagcttctattactattcctggaatagtttatgttattgat
tgcggctttgtaaaattgaaatggttcaacgcggatacccagactgatgcactggttgtt
gttccaatatcacaagcttcagctcaacagcgagctggtagggctgggcggatgagacct
ggaaaagcgtaccgcttattcacggaagattatttttacacactgaatcgattcacgcct
ccagaagtgcaaaggagcaacttatcatcagcagttttgcagttgaaagctttaggtgta
gacgacataattcattttgattttcctagtcctccgccagctcaacatcttgccgtggca
cttgaactactatttgctctgaaagctatcgattcgtcgggttgtctaactgatcctacg
ggtttgaggatagcggaattcccagtggagcccatcatggcaaaaatgctaatttcttca
aacgaatttaagtgctctgcggaaatagcatccattgttgctgcgatgcaggtgcaagcg
ttgttctactatcccacacgcggccaagacagtattaaagctcgcatagcaagacggaaa
tttgaagcctgtgaaggagatttaattacttaccttaacgtggtaactgctttcacaaag
cacggagattgcccaagatggtgtcagtcaaactacctcaataaaaaagcgctcaagcgt
gtccttgttttacgcagccaattaattaaattgctgcagcggttaggtataccgtattcc
tcagccgaaggagaaattgagcccattttgcgttgcatagcttccagttttttcacaaac
actgcataccttcatccgtgtggggagtacaaaactgtgttggcagatgttgttcttaac
gttcacccacattccatattgtatgcagaggaaaaagtgccatgggttgtttttggcgaa
gttttacagacaacccaacttttcatgcgggacatcaccatcgtcgatccgctttggttg
gaggaattagcaccgcattattttcaaaaagttaccgaaagataa
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