Daphnia magna (water flea): 116924606
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Entry
116924606 CDS
T07514
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116924606
Enzymes [BR:
dmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
116924606
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116924606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLC52_ribofla_tr
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
116924606
NCBI-ProteinID:
XP_032787015
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All DBs
Position
LG6:complement(9321547..9326636)
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AA seq
1045 aa
AA seq
DB search
MGRKGNFVEKTPSGPGRKAKKQKPPTLPDHLKEAKEPRETLGRRSQKRAAKRSAVKAGTA
TRKKPAKKNKAVPNESLDSEGMSDDDGERKQLFDDGDSDSMGGQSEDDEPLDDNFKGSSG
DSSDDDEEELPIEKKSKQLKLKKKQEDELGEKELLMNIQQSEKYTLPSGEEIEKELLLPP
DLTILKSRIKEVVGVLSDFTIKREEGRDRVEYLDQLRRDLCSYYSYNDFLMGAFMETFPL
GELIDFLEANETPRPMTIRTNTLKTRRRDLAQALINRGVNLDPIGKWSKVGLVIYNSQVP
VGATPEYLAGHYILQGASSFLPVMALAPQEGDKVLDMSAAPGGKTSHIAALMKNTGMLFA
NDANPDRAKAVVGNLHRLGVTNAVVMTYDGKVLPKMSRGYNRVLLDAPCSGTGVISKDPS
AKTSKDSKDINRCSHLQKELILAAIDCADEGGYIVYSTCSVLVQENEWVVDYALKKRHVK
VVDTGLEFGREGFPRFQKLVFHPSVKLCRRFYPHTHNMDGFFVAKLKKISNNIPSTAEEI
EEEEPAEEKNSNDSDDDTSAKSRRMKRKKGSKANDSNNKNSNPKIKKGSDAKHEKANGVA
KTVKPFERYQLFDISVLPTCLSRYMTRINSRRWESQNFNGLNQYSYKSPIFYSVMHLLVP
HIVHEKPSIYVLMVVGILSSLLIAFFWDATSYVNGEEHSTGLLTLLFFLSLVDCSSSVLF
MPFMARFRQAYLTSYLIGEGLSGFLPSIFALIQGVGGNPSCRNTSAIINGSESWQVEAFY
PEPNFSVSAFFFILMGLMVCCAASFIGLNHCSVARRERYESVATRIPVAIDNQTFVASSE
LVDPTFNGKSTKINYHVELDTVSEEQQRVNTDIPKSVFIYLLTLQAWVCALSNGALPSIQ
SYSCLPYGNTAYHFAVTLSAMANPLSCLIAYFLPITNVCLIAMFAFLGTSVSAYIIALAA
LSPVPPLIGYPSGETLMITSWILCVGLLTYVKVSIASIFRMEEGKGDQNLFWFGVFTQVG
SAIGSIIAFLLVNVYQYFEAYYPCT
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaaaggtaattttgttgagaagactcccagtggtccgggtaggaaagcgaaa
aaacagaagcccccaactctaccagaccatttaaaagaagcgaaagaaccaagagaaact
ttgggtaggcggtcacagaaacgtgcggccaaacgcagtgctgtgaaagctggaacagct
acccgtaaaaaacctgccaagaaaaataaagctgttcccaatgagtctcttgacagtgaa
ggcatgtcagatgacgatggtgaaagaaaacaactcttcgatgatggagattcagatagc
atgggaggacaaagcgaagatgatgaacctttagatgacaactttaagggaagctctgga
gacagttccgatgatgatgaggaagagttacctattgaaaagaaatcaaagcagctcaaa
ttgaaaaagaaacaagaagatgagctaggagaaaaagaattgctgatgaatattcagcaa
tcagaaaagtacacccttccaagtggggaagaaatagagaaagaattgctattgccgcca
gacctgacaattttgaaatcaagaattaaagaagttgtaggagtcttgagtgatttcact
atcaaacgcgaagagggtcgtgacagagtcgaatatcttgatcaactacgtagagatctc
tgttcttattatagctacaatgattttctaatgggagccttcatggaaactttcccactt
ggtgaattaatcgatttccttgaagccaatgaaactcctagacctatgacaattcgtacc
aacactttaaaaacgagaagacgggatttggcgcaagctctcattaacagaggagtgaat
ctcgacccaataggtaagtggtcgaaggttgggcttgtgatctataactcgcaggtacca
gtcggtgccacccccgagtatctagctggtcactacattctacagggagcttccagtttt
ttgcctgtcatggctttggcgccccaagaaggcgacaaagtacttgatatgagcgcagca
cctggtggaaaaacttcacacattgctgcccttatgaaaaatacgggtatgctctttgca
aacgatgcgaatcctgaccgagccaaggctgtcgttggtaacctccaccgtcttggagtt
acaaacgctgtcgtgatgacctacgacggaaaagttctgcccaagatgagtaggggatac
aatcgtgtattgctggacgctccctgtagtggaacaggtgtcatttctaaagatccttct
gcaaaaacatctaaagacagcaaagacatcaaccgctgctctcatcttcaaaaagaactt
atccttgccgctatagattgtgccgacgaaggtggatacattgtatattcaacttgctcc
gttcttgtccaagaaaacgaatgggtagtagattacgcattgaaaaagcgacacgtcaag
gttgtagacactgggctcgaatttggacgggaaggctttccccgattccagaaattagtg
ttccacccatccgtaaagttatgcaggagattctacccccacacccataatatggacggt
tttttcgtagcaaaactaaagaagatatcaaataacatcccgtcaacagccgaggaaatt
gaagaagaagaacctgctgaagagaagaacagcaacgattctgatgacgacacgtccgca
aagagcagaagaatgaagaggaaaaagggaagcaaagcaaatgattctaataacaaaaat
tcaaacccaaaaattaaaaagggaagtgatgcgaaacatgagaaggccaacggggtcgct
aaaacagtcaaacccttcgaacgttatcagttattcgatatttccgttttgccgacctgc
ttaagtcgctatatgacacgtatcaattcccgaaggtgggaaagccagaactttaacggc
ctcaatcagtatagctataagagtccgatattctattccgtcatgcacctacttgtacct
catatcgtgcacgaaaaaccaagtatttatgtgctcatggtagttggaatcctttcctcg
ctgctgatcgcgttcttctgggatgccactagctacgtcaacggcgaagaacacagcaca
ggactacttaccttgctgtttttcttatcactagtcgattgctccagctctgttcttttt
atgcccttcatggcccgatttcgccaagcttacctgacgtcttacttgatcggcgaagga
cttagcggcttccttcctagcattttcgctctgatacagggtgtcggtggcaatccatcg
tgccggaatacatcagctattatcaatggatcggaatcatggcaagtggaggctttctat
cctgagccaaatttttcggtttcagctttctttttcatcctaatgggactcatggtctgc
tgcgcagcatctttcatcggacttaaccattgttctgtagcacgacgggagcggtatgag
tcggtagctacccggatacctgtagctattgataatcagactttcgttgcgtcatccgaa
ttagttgaccccacgttcaatggtaaatccaccaagataaattaccatgtagaattggac
acggtaagcgaagaacaacaaagggtcaatacggacatacccaaatctgtctttatctat
ttgttgacgttgcaagcttgggtatgcgccctcagtaatggagctctacccagcatccaa
agctactcatgtctaccctatggaaacacggcctatcattttgccgttactttgtcggcg
atggcgaacccactatcttgccttattgcatactttctacctattaccaatgtctgtctg
atagccatgtttgcatttttgggcacttcggtctcggcttacataattgcgcttgcggcg
ctaagtccagtacctccgctgatcggatatccttcgggagaaacacttatgattacctcc
tggatcctctgcgtcggtctccttacatacgtcaaagtcagtattgcttccatcttccgg
atggaagaagggaaaggagatcaaaacttgttttggtttggagtattcacacaagtggga
tcggcaattggctccatcattgccttcctcttagtaaatgtctatcaatatttcgaggca
tattatccatgcacataa
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integrated database retrieval system
