Daphnia magna (water flea): 116924729
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Entry
116924729 CDS
T07514
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116924729
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116924729
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116924729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf-RING_16
zf-RING_4
TMEM132_C
zf-C3H2C3
zf_RING_Vps8_fungal
PHD
Hemotin
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
116924729
NCBI-ProteinID:
XP_032787145
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All DBs
Position
LG6:299321..301642
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AA seq
409 aa
AA seq
DB search
MCKSFPCNLVDFFCKWVFLTYLLVWIVEADVLVISRDTNSTVNAFPSLPANFGKVLPFDG
LAGCVVVANPQHACGPIDQPPKNSSCSDTWFVLIRRFECNFVDKVRAAQNAHYDAAIIYN
VGSNLIEPMAGENDDDITIAAIFIGQDDGLKIQSFYTYDKGYMLLLTNELPFNINSYLLP
FAIVVAICFAIMVVFMLVKCVKERRRSRRIRLPSSSLKTIPTNKFKKGDPYDTCAICLED
YVDGDKLRILPCSHAYHAKCIDPWLTRNRRVCPVCKRRVIARGENFSDSDSDTEDESRPL
LRPGSHSSSGGTFTDQTRSIGTSSRPVEGPPILNDEVVTDRGHSVLVSADSVVIENEEDR
IPVNDEEDLNGDSDASFYGESEQRHQNSNANSSVCLTPQSQRSRDALNV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagagtttcccgtgtaacctggttgacttcttctgtaaatgggtgtttttaaca
tacctgttggtatggatagttgaagcagatgttttagtaatatctcgcgatacaaattcc
acagttaatgcttttcccagtttacctgcaaattttggaaaagtattaccgtttgatggt
ttggctgggtgtgtggttgtagcaaatcctcaacatgcttgtgggccaattgaccaacct
ccaaagaacagtagttgttcagatacatggtttgtcctgataagacggtttgaatgtaat
tttgttgacaaagttcgagctgctcagaatgctcattatgatgctgcaatcatttataat
gttggatccaatctcattgagcctatggcaggagaaaatgatgatgacattacaattgct
gccatattcattggacaagatgatggacttaaaattcagtccttctacacatatgataaa
gggtacatgctgttactgaccaatgagttgccatttaatataaacagctatcttctacca
tttgccattgttgttgcaatctgttttgcaataatggttgttttcatgttggtcaagtgc
gtcaaagagcgcagacgatcaagacgtattcgcttaccttcgtcgtccttgaaaactatt
cctacgaataaatttaaaaaaggagatccttacgatacctgtgcgatatgcttagaagac
tacgtggatggcgataaactgcgtattcttccttgttcacatgcttaccatgccaaatgc
attgatccatggcttacacgtaaccgtcgggtatgtccagtatgtaaaagacgagtaatt
gcgcggggcgaaaacttttccgattcggattctgatacggaagatgaaagccgtccgctt
ctgcggccgggttcgcacagctcttcgggaggaactttcactgatcaaacgagaagtatt
ggaaccagtagccgtccagtagaggggccacctattttgaacgatgaggtggtcactgac
agaggacattcggttcttgtttccgccgattcagttgtcattgagaatgaggaagacaga
attcccgtaaacgacgaggaagatttaaatggcgacagtgacgcatcattctacggcgaa
tctgaacaacgtcaccaaaactcgaatgcaaatagttcagtgtgtttaactcctcaaagc
caacgttcccgggatgctttgaacgtttaa
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