Daphnia magna (water flea): 116924855
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Entry
116924855 CDS
T07514
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04519
Cadherin signaling
dmk04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
116924855
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116924855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116924855
Transcription factors [BR:
dmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116924855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
Ank_2
Ank
RHD_DNA_bind
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
116924855
NCBI-ProteinID:
XP_032787326
LinkDB
All DBs
AA seq
1016 aa
AA seq
DB search
MQQPISNSSPYSPESSHSSSSPLSHSYSSGNSPIMCASPNNAYLVTGNLPNSVAARQARL
SPCLSILNQPQSKFRFRYASEMTGTHGCLMAESKERNKKEYIRIQLEGCQEREAIIRCTL
VTNSPKPVPHVHRLGGEGNSNGNEGEFQEIVVSASKNDWIATFSGLTIIHTAKKQVREVV
ERRLITEMGNIPINRNQGQQLKDEADKIANTMDLHSVKLKFEAFVERNGFREQIGVPEYS
HAIHNLKSTHAGDLRIVRIDKVYSCCTGQEEIFIFVEKVNKKDIKIRFFETDENDLEIWS
AFADFSELDVHHQYAIAFKTPPYQDPNIQSDVTVQFQLYRPSNQSTSEAKSFTYTPRERV
GMKRPRRDIPVNSDCHTNKRDYNPTRTLPHDDSSNPSNPVTSFAFRNNGLSGDKSSNQES
ATFRGQEIKSFQNLMGNPSNMVENAPLMEPFNSMHLHASLPEQPWPTIQTAPMPYSHVNP
QQWRPQAPQRITNDDLLRIPIDSGMTPLENENYPWPEINLEQVDDFLLAELLKLDDYGSD
ASGSRSETLTPQLKRMAISARKSPSIEALKPTLKVPSTITTTSNLMSAYSINMARAVRWY
ATTGDLGHILTRMRHLMAMQSDDGDNALHDALIHNQTDVVRTILHAASYHNMELEFVNAQ
NNANLAPLHIAVLKNQTEATALLLQSGANPGLADANGNTPVHLAAMDKNLFDCLKLLLNT
SVWKPAYVSKLNARNYAGLTPLHIAVNALNIKGVELLLSKGVDVNCHDTKRGRSALHLAV
KKRSEEMVALLLCYASVNVNMQSYDGMTALHLAVIDELDNICALLVNSGADPTILNYVSS
STSSENEEYGESESENVTEDSAETGQSPLDLAQCNLTIAKVLLDGSKQLLTSGAIPETVG
GEGEKPVAEDGNSNCMIMDSGIDLMASKELPKELDKRVISELAGILDSPNKEWEKLADSL
DLLLSMQTVLDKQPSPTTYLLSNMDLWEVSTQVVLEKLQFLKFTDAAEVLEKYLAT
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccaattagtaatagcagtccctactcacctgaatcatcacattcctcgagc
tcacctttaagccacagctactctagcggaaattcacccataatgtgtgcctcaccaaac
aatgcctacctagttacagggaatttgccaaattctgttgctgccaggcaagcgagacta
tccccatgtctatcaatacttaatcaaccacagagcaaatttagattccgctatgcatcg
gaaatgacaggaacccatggatgtcttatggctgaaagcaaagagcggaacaaaaaagag
tacatcagaattcaactggaaggctgtcaagaaagagaagccattattcgctgtacgttg
gtcaccaacagcccgaaacctgttccacacgtacaccgactaggaggagaaggaaactcc
aatggtaacgaaggagaattccaagaaattgttgtttccgccagtaaaaatgattggatt
gcaacgttttcgggtctaacaattatacacacagcaaagaaacaagtccgtgaagtagtt
gaaaggcgtttaataactgaaatgggaaatataccaattaatcgtaatcaaggccaacag
ttaaaagacgaagcagacaagatagccaatacaatggaccttcattcagttaaactcaaa
tttgaggcctttgtggagcgaaatggtttccgtgagcaaattggtgtacctgaatattca
catgccattcacaaccttaaaagcacccatgctggagatctacgaatagtacgaattgat
aaggtctacagctgttgcacaggacaagaagagatattcatctttgtggagaaagtcaat
aaaaaagacatcaaaattcgcttctttgagacagacgaaaacgacctggaaatatggagc
gcttttgccgatttctctgaactggatgtccatcatcaatatgctattgcattcaagact
cctccgtatcaagatccgaatattcagtccgacgtaacagtacagttccagttgtatcgt
cccagtaatcaatctacgagtgaagcgaaatcgtttacttatacgccccgcgaaagagtt
ggcatgaagcgaccgcgtcgggatattcccgtgaactctgattgccataccaacaaaaga
gactacaatccgactaggacactgccacatgacgactcgtccaacccgtccaacccggtt
acttctttcgcatttcgtaacaatggcctttccggagataaaagcagcaatcaagaatcg
gctacgttcagaggccaagaaattaaaagttttcagaacttgatgggaaatccttctaat
atggtcgaaaatgcgccactgatggagccatttaattctatgcatctacatgcatcccta
cccgaacaaccatggccaacgatacagacagcaccaatgccttattctcatgtgaatcct
caacaatggcgaccccaggcgccccagagaattaccaatgacgacttgctaagaatacca
attgattcggggatgacgccacttgaaaatgaaaattacccctggccagaaatcaatctt
gaacaagttgatgacttccttctagcagaacttctgaaattggacgactatggatccgat
gcttccggatcaagaagtgaaactctaacccctcagttgaaacgcatggcaatatcggca
agaaagtctccttccatcgaagctttaaagcctacccttaaggtcccatccacaattaca
acaacgtccaatctaatgtctgcgtattcgatcaacatggctcgcgccgtacgttggtat
gcgacgacgggagatttgggtcacattctaacacgcatgcgacatcttatggcgatgcag
agtgacgatggggataacgcacttcacgatgcccttattcataatcaaactgacgtcgta
cgcactatactccacgcggcatcttaccataacatggagctggaattcgtcaacgcccaa
aacaatgcgaatcttgcacctttacacattgccgttcttaaaaaccaaactgaagcaacg
gccttgttattacaaagtggtgcaaatcctggtttggcagatgctaatggaaatactccc
gtccatctcgctgctatggacaaaaacctgtttgattgccttaaactacttcttaatacc
tccgtctggaagccagcttatgtgtcaaaattgaatgcgaggaattacgcaggtcttacc
cccctacatatagcagttaacgcgctgaatattaaaggtgtagaattactgctttccaaa
ggagtggatgtcaactgccatgataccaagcgtggcagatcagccttacatttagccgta
aagaaacggtctgaagagatggtggccttgttgctttgttatgcatcggtgaacgtgaat
atgcaaagctatgatgggatgacggctctacatctggccgtaattgacgaacttgataac
atttgtgcgttattggtaaactccggtgcggatccgacaatcttaaactacgtgagttct
tccacatcatcagaaaatgaagaatatggtgaaagtgaaagtgaaaatgtgacggaagac
agcgcagagacaggccagagtccgttagatttggcacagtgcaatttgacgatagcaaaa
gttttacttgatggttccaaacaactgttaacttccggtgctattcctgaaactgtaggc
ggggaaggagaaaagccggttgcagaagatgggaattcaaactgcatgataatggattca
ggaattgatttgatggctagtaaagaattgccgaaagaactggacaaacgcgttataagc
gagttggctggtatcttagattcacccaataaagagtgggaaaaactggccgacagtctg
gatctcttattgagcatgcagaccgttttggacaaacaacccagcccgacaacttatctc
ctttcaaatatggacctttgggaagtatcaactcaagttgttttggagaaactacaattt
ctaaaattcacagatgcagcggaagttctggaaaaatatttggcgacatag
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integrated database retrieval system
