Daphnia magna (water flea): 116925056
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Entry
116925056 CDS
T07514
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116925056
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116925056
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116925056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-CCCH_9
PAM2
Motif
Other DBs
NCBI-GeneID:
116925056
NCBI-ProteinID:
XP_045030935
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All DBs
Position
LG6:1368270..1372376
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AA seq
452 aa
AA seq
DB search
MRTTMIHTPLGFVLPDWPILSVQVATLKKISKATSIILGIGAICAVWLRKVFVRSCPIVN
MAEGWTEKKSSWGPLESHSLSSVPPCRFFQLGKCIYGENCRYLHELDAETNESNDSCHNV
MAVNWVNAPEFIPSSTIYSAADTQLDFPAMQSFAESGIKEAGPSTSQQTSVKSYAKAVDP
NAGQSFKIAQSTSELCPYFFMGSCRYGEECTYIHGDLCELCSQHCLHPTDEEQRIEHNQS
CLLQHKVDMEKSFAVARSRDKACGICMEIIWEKLPSTKQRFGLLPNCSHCFCLDCIRKWR
QEKQFENKIIRSCPECRVQSDFVCPSRYWCETKEEKEKLITDYKGALSNKACKYFNQGDG
ECPFGNRCFYLHALPDGTRTDVGPPQGKLRRRRFGQDEEEAEVFQVLLWDFLEERESRYV
LQLGLDLEDLDLYTSDSDDYYSDEADSLFFLQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgacgatgattcacacgcctttgggctttgttttgcctgactggccaatacta
tcagttcaggtggctactctgaaaaagatatcgaaagccacctcaatcattttgggcatt
ggtgccatttgtgctgtctggttgcgcaaagtgttcgttcgttcgtgcccaattgtaaac
atggcagaaggctggacagaaaaaaaatcttcctggggtcccttggagtcacactcgttg
tcctcggtgccaccgtgtcgtttttttcaactaggaaaatgtatttatggagaaaattgc
agatatcttcatgaacttgatgcggaaacaaatgaatccaacgattcatgtcataatgtt
atggcagtgaattgggtcaatgctcccgaattcatcccctcatctactatatattcagct
gcagacactcagttagactttccagcaatgcagtcatttgctgaatcaggtataaaggaa
gctggaccaagcacctcacagcagacatcagtaaaatcctatgccaaagctgtggacccc
aatgctggccagagcttcaaaattgctcagtcgacatctgaactgtgtccttattttttc
atgggttcctgtcggtatggcgaagagtgcacctacattcacggcgatctctgcgaactc
tgcagccaacattgccttcacccgacggatgaagagcagagaatcgagcacaaccagagc
tgtctgctccagcacaaagtagacatggaaaaatcctttgctgttgctcgttcacgagac
aaggcatgcggcatttgcatggagatcatttgggagaaattgccgtctaccaaacagcgt
ttcggactgctcccaaattgttcgcattgtttttgcttggactgtatacgaaaatggcga
caagagaaacagtttgagaacaagattattcggtcgtgcccggaatgccgggtgcagtct
gacttcgtgtgccccagtcgttactggtgcgagaccaaagaagagaaggaaaagttgata
accgattacaagggagccttgagcaacaaagcttgcaagtactttaatcaaggtgacggt
gaatgtccgtttggaaaccgttgcttttacttgcacgcgctacctgacggaaccagaacg
gacgttggtcctcctcagggtaagctgcgacgtcgtcgtttcggacaagatgaggaagag
gcggaagtcttccaggtactgttgtgggatttcttggaagagcgtgagagtcgctacgtc
ctccagttagggctcgacctggaagacctcgacctgtatacatcggattcagacgattac
tattcggatgaagctgacagtctctttttcctccagtga
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