Daphnia magna (water flea): 116925107
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Entry
116925107 CDS
T07514
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116925107
Membrane trafficking [BR:
dmk04131
]
Protein recycling
Others
Retriever complex
116925107
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_8
zf-C2H2_2
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
116925107
NCBI-ProteinID:
XP_032787621
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All DBs
Position
LG6:4081335..4101427
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AA seq
1360 aa
AA seq
DB search
MLATALATSSWDSSSSDDLSSSGRRPHCHHPHNHRYNHQQQLEEANNSTDQEPEAVPAAR
EKKSRAGSNRSVHQIQVQLQLQHKQRHQSYVYPKLQLVQIDDAWYALNQTCLQIYQQLQM
CGTAQLMPVDVVPLHKLPECVRKSLSPPESDEANRSNNRRRNSQQTSGASRAHHRRVGSH
DDDGLMAANAAADGANTTAGNLQMDTFRVYDIMSDAASMAASSAPTAASPLFRQPTDATS
DRSHAAAGDKSWWSRFFQGNNSASNVTPSTGGNATWMASCRRRQPPGIQHPFRRRHRQIV
QKLMEETCLTEEDNRRERETLVNGCDSSSAPDVDGHESVDVRREHEPDGQFTCVVCQSVF
ATHRLLQRHRERANHFGIAKRRNYREEEVAYRSLRTPNDKLPHPLQSVISRESNAKVKSI
VPRKTISSAYSDPLSQALEGSDPLSQFVSKDEVEGADIPATNVNQKGAAAQEWLKHRTTI
LSKFTTSEKLSIKSSFLQGGEKLVVKQEINDKIKHRLQQLDEFEEHVSEHKGLSRDDYVS
RITQISQELHQAWALDQRVKALKIVIQCSKLLLETHPFAFYPSKFALITDILDKFGRMVF
ERIAEKGEIRLVDHQLPKYFKPEHVSESARETCRNWMYKIASVRELLPRIYVEMAVLESY
SFLENTDFSATLIRLSRVIRGVGNPLVAAYARAYLMRVGRAIRLQDRSFVVENVRDLYLS
YNQLYSNSVRSELTIFRTDLADYLSLFSPAYDWIFQTLAHTGQYDELDSIWRQSFNQAEP
GLLWLSLLSQFPSDFVLSKCLELALHITTTPSTGVPSQQLMVLMGQVLSRNLASSCDSNP
GKMLNVVWPYFSRKEDADSYLQCMDAWMPYLLRHWRVKEMHRIINDIVQHCRPKAQAHHV
ANLTSIVHALVRTEQVDYQSLFTTDSLMGLLDIYPEGHSRAEAAKILLQQFLIDHDRPLN
HPLMVDHLLSIARILHDTLNATSVEDEKRQISEIAIALIDRVDFGRDFQQMLSFYGDARA
AFTNLDPVLAHLVQAINRLSSRTRQLIQEHNERTGHFVRACGAFAYITIPAITCPMVRFR
LYLLSSQVALANECLGQADACLEGAISLVIEFSPLEEQWIVSNLSNLLSTLLVQPDTPDQ
NRLHHLRRLLRNVRTFSINHALHRLRSTIYIQAIRLLSAYIQSDYIYHVPHVESNDRLYL
GDEDFRMEAADYCSQLLTELLNDLNQLGNENQYGKQASLCLDLFSLLIESADLKAEPSLT
QLAAKLFLLARKHNQWDADYASDDNAGGSSADEEAGLDLVAAFRVFDRDKNGFITKDELR
LAMELIDESMTEEGLNELIKMADVDKDGRINYEEFAKMLL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgacggctttggcaacgtcgtcgtgggattcatcgtcgtcggacgacttatcg
tcaagtggacgacgccctcattgccatcatccgcacaatcatcgttataatcaccaacaa
caattggaagaggccaataacagcacggatcaagagccggaggctgtgccggcggcgcgt
gagaagaaaagccgcgccggaagcaatcgttcagtgcatcagatccaagttcagttgcag
ctgcagcacaagcagcgccatcagagttacgtctacccgaaattgcaattagtgcagatc
gacgatgcgtggtacgcactcaatcagacttgcctgcaaatctatcaacagttgcagatg
tgcggcactgcccagctcatgcccgtcgatgtcgttcctctccacaagttgccggaatgc
gtgaggaaatcgctgtctcctcccgagtcggacgaggccaacaggagcaacaaccgccga
cggaacagccagcaaacaagcggagcgagtcgagctcatcatcgtcgcgtcggcagccat
gacgacgacggccttatggccgctaatgcggccgccgacggtgccaacacaacagctggc
aatttgcagatggacaccttccgtgtttacgacatcatgagcgacgctgcatccatggca
gcctcgtccgcaccgactgctgcgtccccccttttccgccagccaacggacgcaacgtcg
gaccgtagtcatgcagctgccggggacaagtcttggtggtctcgtttctttcaaggcaac
aatagcgccagcaacgtcactccttccaccggaggcaatgcgacgtggatggcttcctgc
agacgacgtcagcctccgggtatccagcatccattccgccgtaggcatcgtcaaattgtt
cagaaactcatggaggagacctgtctgacggaggaagacaaccgccgagaaagagaaacg
ctggtgaacggatgcgactcatcatccgcgccggatgtcgacggacatgagtcggtcgat
gtccgtcgcgagcacgaaccagatggccagtttacctgtgtcgtttgtcagtccgtcttc
gcgactcaccgcctcttgcagagacatcgcgagcgtgccaatcactttgggattgccaag
cgccgaaactatcgcgaggaagaagttgcatatcgaagcttaaggacaccgaatgacaaa
ttgccgcacccattgcagagtgtaatttctagagaaagcaatgcaaaggtcaaatcaatt
gttccacggaagacaatttcttctgcctactctgatccgctcagccaagcgcttgagggc
agtgacccactcagccagtttgtatccaaagatgaagtggaaggcgctgacatccctgcc
acaaacgtgaaccagaaaggtgctgcagcgcaggagtggctcaaacataggactaccata
ctcagcaaatttacaacatcagagaaactgtccatcaaatcaagtttccttcaaggagga
gaaaaattggtggtcaagcaggagatcaatgataaaatcaaacaccgactgcagcagctg
gacgagtttgaagagcatgtcagtgaacacaaaggtctttcccgagatgattatgtttca
cgcatcacccagatcagtcaagaacttcatcaagcttgggctttagatcagagagttaaa
gcattgaaaattgtcatacagtgttccaaattactgctcgaaacccacccctttgcattc
tatccaagcaagtttgctctcattactgacatattggataagtttggccggatggtgttt
gaaaggattgccgaaaagggagaaatcaggctcgtagatcatcagcttcccaaatatttt
aaacctgagcatgtctctgagtcggcacgtgagacttgtcgcaattggatgtacaagatt
gcatcagtcagggaattgttaccgcgcatttatgtcgaaatggccgtgctggagagctat
tcatttctcgaaaacacggatttttctgcgactttaatccgattatcgagagtcattcgt
ggtgtgggcaacccattagttgccgcctatgcacgcgcttatttaatgcgcgttgggcga
gcaatacgtcttcaagatcgttcgtttgttgtcgagaatgttcgtgacctctatctttct
tacaaccagttgtatagcaatagtgtccgttcagaactgaccatcttccgaacggatttg
gcagattacttgtctctcttttcgcccgcctatgactggatcttccagactttggctcat
actggccaatacgacgaactggattctatctggcggcagagtttcaaccaagctgaacca
ggattactttggctatcccttctcagtcagttcccgtcggactttgtcctatccaagtgt
ttggagctagcacttcatattacaactacaccctcaaccggtgttcctagtcagcaattg
atggtgcttatgggccaagttctcagccggaatctggcgtcttcgtgcgattccaaccca
gggaaaatgcttaatgtcgtttggccttatttcagccgcaaagaggatgcggattcctac
ttgcaatgcatggacgcttggatgccttatcttttacgccattggagggtcaaggaaatg
caccgcatcatcaacgatatagtccagcattgtcggccaaaggctcaagcccaccacgtg
gcaaatctaaccagtatcgtccatgcattggtccggacagaacaagttgactaccaaagt
ttattcacgacggattcgttaatggggctattggatatctaccccgaaggccattcgcga
gcagaagcggccaaaattttacttcagcaattcctcatagaccatgatcgaccattaaat
catccacttatggttgaccaccttttatccatcgcccgcatcctccatgacacactcaac
gccaccagcgtagaggacgaaaagcgacaaattagcgaaatcgccatcgcccttattgac
cgtgttgattttggccgtgacttccagcagatgctatcattttacggcgatgctcgagcc
gcattcactaatctcgatcccgttcttgcccacctagttcaggcgatcaaccgcttaagt
agccggactcgccaattgattcaggagcacaacgagagaactggccactttgttcgtgcc
tgtggcgcctttgcctacatcacaattccggccattacatgcccaatggtccggttccgt
ttgtatttgctgtccagccaggtagctttggctaatgaatgtcttggacaagcggatgcg
tgtctcgaaggagccatcagtttggtgattgaattctcgccgcttgaagaacaatggatc
gtgtctaatctatcaaaccttctttccacccttttagtccaacccgacacgcccgaccaa
aaccggcttcaccatttacggcgattattacgtaacgtgcggacgttttccatcaaccac
gcgctgcatcgtttacgctccaccatctacattcaagcgatacgtttactttccgcttat
atccagtctgattacatctatcacgttccacatgtggagtccaacgaccgtctctatctt
ggtgacgaagacttccgaatggaggcagccgattactgcagccaactattgacagaactg
ctcaacgatcttaatcagctgggcaatgagaaccaatacggaaagcaggctagcctttgt
ttagatttgttttcgttgttaattgagtcagctgacctcaaagccgaaccgagtctcacg
cagctcgccgccaagctctttctccttgcccgcaaacacaaccaatgggatgccgattac
gcgtctgatgacaacgctggaggcagcagtgcggatgaagaagccggtctagatttagtg
gcagcctttcgagtttttgatcgcgacaagaacggcttcataaccaaagatgaattgaga
ctagcaatggagttaatcgacgaatccatgactgaagaaggtctcaacgagctcatcaaa
atggctgatgtcgacaaagatggtcgcattaattatgaagagtttgccaaaatgctttta
taa
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