Daphnia magna (water flea): 116925169
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Entry
116925169 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 24
KO
K15167
mediator of RNA polymerase II transcription subunit 24
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116925169
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
116925169
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Gene cluster
GFIT
Motif
Pfam:
Med24_N
Mak10
DUF3290
Motif
Other DBs
NCBI-GeneID:
116925169
NCBI-ProteinID:
XP_032787706
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All DBs
Position
LG6:8415737..8423349
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AA seq
1260 aa
AA seq
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MTSLFRNPENGYTTTVKISSGPSETEKEGLSAQFQVHENQPTLNSNQTQARMFLRKRIVL
LTLALILAIVVITVTIVGLLISSYNERQQAEAEAREATGLFMEIKNEKKVSSIAAGFPDL
GDPDADDERDTFLPVSPARTIPDTGSGFKPIATEKTSKRGKTPVPRVKDEVEIFAELSSG
DSSGDQHEAGIGFKPIATEKISKRGKTPVLRVKDEVEIFAELGSGDSSGDQHEAGSGDST
GGRHEIGNGCGSGCGSGIEQDRFVLKGSLQPTERMTESTEQKLKHLMRKAWRERWTDLMW
GIYVKEVIPAGSTGDTYNLAESILKQALIGPSPNSKLLSYLQYSLNVQIVSYSAVFENIC
LQGSIQKTRCLLELLHLLEQSLKHISCSGSADECAALASSLMSLETWLWSITSDGLKKLS
EANSTSNSYTVICHYTTGLLGTLYEENYLVSLLYIARCCTNDQFAATNLASLVNQTESNI
KHLAGAGNLSLENLVEPIEKVIRQCRLFENDLFKENGPEKPFYENSLCTDIHTLISWEAL
LRPTSDGLELTRQLEVLQKLRGYSATQLYCEILRACCLGLAETADSPGELRWAVFTFLKA
PLLLLRLHRSIFGLDPNSPIGEPSPEVAVAFERLLCYPGLLETTDAKCHCNVVEGLLNEV
KMRTSLLSEWHVTSILSKRESLSRGGLKLETTNTQIATLVLRAEPTVASILKTLDTDYAK
NQDTLLKVLSHLLSGQSFELILNAATGTGKLRAFATKLVRFNEANRQPAGSDPSKTANSR
ALLFDISFLMLCRITQMYGIEVILSGELGGETFFEQWASEWLKPNQAPDLLLNRCDPMLT
DQLLKALTSGESDLRSGSVRWHDACFHVPAVIREILAAYESQLVSDEEVERILDTLRTQM
CCLSVCAATWLRFYIQVQPMNLKSKPTMMLDHLMTPLSLDDSKEHYRERSVLMLQIIRRL
AQDDNPLQGVSDNQDQSLDHQLSKLWNKILNHGWSDHCTTLGIDRLFKIGGATWLVTSLV
KAVIKEQSSDKRQRCVEGALSVAHLDLESCAISLATRVLPFLLTHSSMLASDEETGGPGG
KALAQLAVLLFTAALNNQIASDSDPSTAAKKSGSKRAIDWDLNTPGFRYPPLKKVALHDD
ELEALCVASSTTHENKPLPNAIANLMQLMTRVAGDGIITPQLAFISYFIQTMAEITSVKT
KEVMKPLLSLIPPALVFYMLAVWPGLMSISDVAKLLAHPGDEMGVGKIAARIVCAFKNTN
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctctcttccggaatccagaaaacggttatactactacagtaaaaattagtagt
ggcccatcggaaacggaaaaagaaggtttatcagcacaatttcaagtccacgagaatcag
cccaccttgaacagtaatcaaacacaggccaggatgttcttgagaaaacgaatcgtattg
ctgacattggctctcattttagccattgttgtcatcaccgtaaccattgtcggactcttg
atctcatcatataatgaacggcagcaggcagaagcagaagctagggaagccacgggcctt
tttatggaaattaaaaatgaaaagaaagtgagttcgatagctgcaggatttcctgatctc
ggcgatccagatgcagacgacgaacgggacaccttcttgccagtatcaccagctagaaca
attccggacactggtagtggttttaagcccattgctacagaaaaaacttcgaaaagagga
aaaacacctgttcctcgcgttaaagacgaggtggaaatatttgctgagttgagtagtggt
gattcctccggagaccaacatgaagctggcattggttttaagcccattgctacagaaaaa
atttcgaaaagaggaaaaacacctgttcttcgcgttaaagacgaggtggaaatatttgct
gagttgggtagtggtgattcctccggagaccaacatgaagctggcagtggagattctacc
ggaggccggcatgagattggcaatggctgcggcagtggttgtggcagcggaattgaacag
gatcgattcgtattgaaaggctcattacagccaactgaaagaatgaccgagagtactgag
cagaagcttaagcacttgatgaggaaggcttggagggaacggtggacagatctcatgtgg
ggtatatatgtcaaagaggtcattcctgcgggatcaacaggagacacctataacttagcg
gaaagtattctcaagcaagctttgattggaccatccccaaactccaagttgctctcttat
ttacaatattctctgaatgttcagattgtttcatatagtgctgtttttgagaatatttgc
cttcaagggagtattcagaagactagatgtcttttagagttgttgcatctcctagaacag
tcattgaaacacatttcatgttctggatctgcggatgagtgtgcagctttagcatcgtct
ctcatgtcattggaaacatggttgtggagtattacatctgatggactcaagaagttgtca
gaagctaatagcacaagcaacagctacacagtcatctgccattatacaacagggctatta
ggcaccttgtatgaggaaaattatttagtatctcttctttatatcgcacgttgctgtacc
aatgatcagtttgcagcaactaatcttgcatcacttgtaaatcaaactgaatccaacata
aaacatctggctggtgccggaaatctgtcgttggaaaacttagtggaacctattgagaaa
gtcatccggcaatgtcgattgtttgaaaatgacctgttcaaagaaaacggtccagaaaag
ccgttttatgagaactcgttgtgtacagacatacacactttaatatcttgggaggcattg
cttcgtcctacgtcagacggtcttgaactgacacgtcaattagaagttttacaaaaacta
aggggatattctgccacgcaattgtactgcgaaatccttcgagcttgttgtctgggatta
gctgaaacagccgattcgcctggagagctacgatgggccgttttcacttttcttaaggca
cctttactactgctccgacttcaccgatcaatttttgggttggatccgaattctcccatt
ggcgaaccaagcccggaagtcgccgtggcgtttgaacgactcttatgctacccaggtctt
ctagaaactacagatgcgaaatgccattgcaatgttgttgaaggattgctgaatgaagta
aagatgcgcacatctctgctgtccgaatggcatgttactagtattctaagcaaaagagaa
agcctatcgcgcggaggtctgaaattggagaccaccaacactcaaatagctactttggtg
cttcgtgccgaacccaccgtggccagtattttgaaaactttagacacggattacgctaaa
aaccaggacaccttattaaaggttttgtctcatttgctatcgggccaaagctttgagctt
atactaaacgcagcgacaggaacaggtaaactccgggctttcgccacaaaactagtgcgc
ttcaacgaagcgaaccgccaaccagctggctctgatccaagtaaaacggcaaattcgaga
gcattgcttttcgacatttcttttctaatgctttgccgtattacgcagatgtacggcatc
gaggttatcttaagtggcgaactaggaggggagaccttttttgaacagtgggcttcagaa
tggttgaaaccaaaccaggcacctgatcttttattaaatcgctgtgatcccatgttgact
gatcagttattgaaggcgctgacctctggtgaaagtgaccttagatctgggagtgttcgc
tggcatgatgcctgctttcatgtccctgcggtaatacgtgaaattttagcggcgtacgaa
tcacagttggtttctgacgaagaagtcgagagaattctcgatacactacggactcagatg
tgctgcctgtcggtctgcgctgccacttggttaagattttacatccaggttcaaccaatg
aatttaaaaagcaaacccacaatgatgctcgaccatttgatgactcctcttagtcttgac
gactctaaagagcattacagagagagatcagtgttaatgctgcaaatcattcgccgtcta
gcccaagacgataacccccttcaaggtgtttctgacaatcaagatcagagtttggatcat
cagctttcaaaattgtggaacaaaattttgaaccatggatggtcagaccactgtacgaca
ctaggtatcgaccgacttttcaaaattggtggcgcgacgtggttagtcacttcgttggtc
aaggctgttatcaaagagcaatcttctgacaaaaggcaacggtgcgtcgaaggggcgctg
tcagtggcacatttagatttggaaagctgtgctatttctttggccactagagtcctacca
ttcttactgactcactcttcaatgcttgccagtgatgaggaaacaggtggaccaggcgga
aaggctttagctcagttagctgtgctgctatttactgctgcattgaataaccaaatagca
tcagactcagatccttcaaccgctgccaagaaatcgggttcaaagcgcgccatcgattgg
gatttaaatacgcctggcttccgctatcctcctttgaaaaaagtggctttgcacgatgat
gaactggaggctctctgtgttgcttctagcaccacccacgagaacaaaccacttcctaat
gcgattgcaaacctgatgcagttaatgacccgagtggctggagatggcatcatcactcca
cagcttgcatttatcagctatttcattcaaacaatggcagaaataacatctgtaaaaacg
aaggaggtcatgaaaccccttttgagtttgatacctccagctctggttttttacatgcta
gccgtttggcctggattaatgtccatttcagatgttgccaaactgttggctcatcctggc
gatgaaatgggtgtcggaaaaattgctgctcgaattgtttgtgcatttaaaaatacaaac
taa
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